GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:09:38

Sequence gi568815589f:89505122_89706076 : 200955 bp : 47.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    545    716  172  2  1   54   39   110 0.516   2.65
 1.02 Intr +   7571   7738  168  1  0  108   66    78 0.986   7.74
 1.03 Intr +  11010  11115  106  2  1  102   48    72 0.316   4.39
 1.04 Intr +  11538  11572   35  1  2  130   42    18 0.089  -0.66
 1.05 Intr +  13324  13460  137  0  2   56   94    81 0.080   4.87
 1.06 Intr +  14146  14288  143  1  2   -3   94   102 0.039   1.70
 1.07 Intr +  24148  24188   41  2  2   87   75    -8 0.122  -4.26
 1.08 Intr +  25299  25376   78  2  0   96   93    18 0.741   2.85
 1.09 Term +  25692  25823  132  2  0   84   48   108 0.618   4.49
 1.10 PlyA +  28165  28170    6                               1.05

 2.07 PlyA -  30288  30283    6                               1.05
 2.06 Term -  30615  30505  111  0  0   89   55    58 0.324   1.16
 2.05 Intr -  33261  33135  127  2  1   28   80    89 0.147   2.78
 2.04 Intr -  47895  47789  107  0  2  112   31    40 0.049  -0.29
 2.03 Intr -  51383  51300   84  2  0   82   94    29 0.732   2.92
 2.02 Intr -  51909  51823   87  0  0   21   85    95 0.496   2.67
 2.01 Init -  53292  53245   48  0  0   67  111    31 0.531   4.25
 2.00 Prom -  53702  53663   40                              -6.26

 3.00 Prom +  53835  53874   40                              -3.96
 3.01 Init +  54898  55077  180  0  0   25   51   184 0.389   7.58
 3.02 Term +  67000  67098   99  0  0   44   39   112 0.078   0.03
 3.03 PlyA +  67835  67840    6                               1.05

 4.00 Prom +  74716  74755   40                              -4.06
 4.01 Init + 100001 100053   53  1  2   70   94    58 0.984   5.25
 4.02 Intr + 100311 100412  102  0  0  117   86   154 0.996  17.39
 4.03 Intr + 100546 100759  214  1  1  100  109   491 0.996  51.12
 4.04 Term + 100848 100958  111  2  0  127   48   163 0.994  14.76
 4.05 PlyA + 101415 101420    6                               1.05

 5.00 Prom + 102056 102095   40                              -2.26
 5.01 Init + 105765 105856   92  2  2   81   64    68 0.336   2.43
 5.02 Intr + 107823 107933  111  0  0  142   44     4 0.281   0.89
 5.03 Intr + 112020 112087   68  0  2  102   74    37 0.227   2.25
 5.04 Term + 116021 116094   74  0  2   32   52   118 0.317   0.67
 5.05 PlyA + 116144 116149    6                               1.05

 6.04 PlyA - 116484 116479    6                               1.05
 6.03 Term - 118526 118375  152  0  2    6   54   111 0.359  -2.43
 6.02 Intr - 118744 118603  142  1  1   68   92    85 0.681   6.83
 6.01 Init - 119501 119490   12  2  0   86   99     6 0.722   1.83
 6.00 Prom - 120340 120301   40                              -1.36

 7.10 PlyA - 125447 125442    6                               1.05
 7.09 Term - 127727 127447  281  0  2  117   48    84 0.056   2.91
 7.08 Intr - 138629 138579   51  0  0  117   85    16 0.052   3.08
 7.07 Intr - 150512 150402  111  0  0  110   53    40 0.341   3.05
 7.06 Intr - 151384 151254  131  0  2   64   56    58 0.301   0.54
 7.05 Intr - 154632 154529  104  0  2   70   77   100 0.918   6.07
 7.04 Intr - 156531 156362  170  1  2   69   85   126 0.930  10.07
 7.03 Intr - 158034 157907  128  2  2   21   54    88 0.262  -0.98
 7.02 Intr - 161641 161534  108  0  0   79   82    49 0.746   2.80
 7.01 Init - 163340 163186  155  2  2   78   81   148 0.524  12.56
 7.00 Prom - 165959 165920   40                             -10.94

 8.04 PlyA - 166011 166006    6                              -0.45
 8.03 Term - 166708 166342  367  0  1   38   37   776 0.726  61.58
 8.02 Intr - 168010 167983   28  2  1  105   97     7 0.941   0.47
 8.01 Init - 170115 169959  157  0  1   56   42   167 0.916   6.98
 8.00 Prom - 171037 170998   40                              -6.46

 9.06 PlyA - 171890 171885    6                              -0.45
 9.05 Term - 172944 172870   75  0  0   84   49    66 0.046   0.14
 9.04 Intr - 177423 177313  111  0  0   84   78     9 0.017   0.08
 9.03 Intr - 180159 179941  219  0  0   45   77   106 0.100   3.70
 9.02 Intr - 190572 190447  126  0  0   64   51   109 0.923   5.68
 9.01 Init - 191763 191641  123  0  0   49  105    89 0.657   6.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 125136 125273  138  2  0   83  103    35 0.831   5.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:89505122_89706076|GENSCAN_predicted_peptide_1|337_aa
XKGAVNLSMGELNCSDSLLIIREFGEYKGLDFSKRNIESLIAILMTPWFSPFSVYDCQDT
WIIIEVGGSELRSTRCKPAHLGDVTCPHPLYTHVPFLTLPQASETVAFHRLGTAEQQPTH
LAGLLSVAPVPLTPQGGCRRITMLTDCVQGTPSTGRKKAQSQKMLPVPDKHVVDLCISAA
RPLENECESQLEETSRKPGDPCQEGDRSEPPNKKPEPPQPTMPWEAQAAAKGYMERIHST
TPGYQLAASISVHPAPVFPKPCDYSPHHRQLPFITSSRAQVEGSYSHIVLEKQPTLANRR
MNGVLRHRYAVEEQLGDFQALVAKVQHPREAGAACFY

>gi568815589f:89505122_89706076|GENSCAN_predicted_CDS_1|1014_bp
nngaaaggtgccgtgaacctgagcatgggagaactcaattgttctgattcccttttgatt
attcgggaatttggagagtacaaaggattggatttttcaaagagaaacattgagagcctt
attgctattcttatgaccccatggttttctcctttctctgtctatgactgtcaggacaca
tggatcatcatcgaggttggcggctcagagctaaggagcacacgctgcaaaccagcccac
cttggggatgtgacttgtcctcaccctctttatacccatgtccccttcctgacgctgccc
caggcttctgagacagtagccttccacaggcttggaactgcggaacagcagcctacacac
cttgcagggctgctgtctgtggccccagtgcccttgacaccccaggggggctgcagacgc
atcaccatgctaacagactgtgttcaaggaaccccaagcactggaagaaagaaagcccag
tcacagaaaatgctacctgttcctgacaagcacgtagttgatctttgcatatctgctgct
agacctttggaaaatgagtgtgaatctcagcttgaggagacttcaagaaagcctggtgac
ccctgccaggagggtgacagatctgagccaccaaataagaagcctgagcctcctcagccc
accatgccatgggaagcccaggctgcagcaaaaggctacatggagaggatccattcaaca
accccgggctaccagctggcagccagcatcagtgtccatccagcccctgtttttcccaag
ccctgtgactactctccccatcatagacaactgccctttatcacctcctccagagcacag
gttgagggcagctacagtcacatagtgcttgagaagcagccgaccctggccaatcgacgg
atgaacggggtactcagacacaggtatgcagtggaagagcagctaggggacttccaggct
ctagtggccaaagtacagcatcctcgagaagctggagctgcttgcttttattga

>gi568815589f:89505122_89706076|GENSCAN_predicted_peptide_2|187_aa
MCQLHRKKQKPQEKLLERADSNHMKVPRHTHESDRSVNAQQRSASSQNTPTGPASTFHAG
KHSTSTTSQLTFQITPAENICTKAMALVHIEEHPGGIHFQNTFPKRLHRIQELEMTIAPE
FAKRLERRSRLSSACKAHYPRDEEGSAAGLPVWVSIELRQPGVPGGSEGVKQGKVSLPWG
TMSTSYT

>gi568815589f:89505122_89706076|GENSCAN_predicted_CDS_2|564_bp
atgtgccagcttcacaggaaaaagcaaaaaccacaagagaaactattggaacgtgcagat
tcaaaccacatgaaggtgccacggcacacccacgagagtgaccggagtgtgaatgcgcaa
cagcgctcggcatcgagtcagaacacccccaccgggccagccagtaccttccacgccgga
aagcactccacctccactacctcccagctgaccttccagatcaccccagctgagaacatc
tgcactaaggccatggctttagtgcacatcgaagagcacccggggggaatacatttccag
aatacatttcctaaaagattgcacaggatccaagaactggaaatgacaattgctccagaa
tttgccaagagactggaaaggagatcaaggctcagctctgcctgcaaagcccattacccc
agggatgaggaaggcagtgctgcaggcttgccggtgtgggtgtccatagagctgagacaa
ccaggggtccctgggggctcagagggtgtgaagcagggcaaggtctcgctgccatggggc
accatgagcacatcctatacctga

>gi568815589f:89505122_89706076|GENSCAN_predicted_peptide_3|92_aa
MQLVAAKLGFIAVAQRQVTKNVDQEDDTIGSAFVTVICHSLWLHADSVRTCGDVATVVLG
KKEEEKGNGKETGKKVKIIRGLTQEFHDVNKF

>gi568815589f:89505122_89706076|GENSCAN_predicted_CDS_3|279_bp
atgcaacttgtggctgccaagttgggcttcatagctgtagcacaacggcaggtcaccaag
aatgtagaccaggaagatgacaccatcggatctgcatttgttactgttatttgtcactca
ctgtggctccatgcggacagtgtaaggacctgtggagatgttgccacagtggtgctgggg
aaaaaagaagaagagaaaggaaatggaaaggaaacaggaaagaaagtgaagatcattaga
ggattaacccaggagtttcatgatgtgaacaaattctaa

>gi568815589f:89505122_89706076|GENSCAN_predicted_peptide_4|159_aa
MTLEEVRGQDTVPESTARMQGAGKALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFC
VLAAGEEDEGDIALQIHFTLIQAFCCENDIDIVRVGDVQRLAAIVGAGEEAGAPGDLHCI
LISNPNEDAWKDPALEKLSLFCEESRSVNDWVPSITLPE

>gi568815589f:89505122_89706076|GENSCAN_predicted_CDS_4|480_bp
atgactctggaagaagtccgcggccaggacacagttccggaaagcacagccaggatgcag
ggtgccgggaaagcgctgcatgagttgctgctgtcggcgcagcgtcagggctgcctcact
gccggcgtctacgagtcagccaaagtcttgaacgtggaccccgacaatgtgaccttctgt
gtgctggctgcgggtgaggaggacgagggcgacatcgcgctgcagatccattttacgctg
atccaggctttctgctgcgagaacgacatcgacatagtgcgcgtgggcgatgtgcagcgg
ctggcggctatcgtgggcgccggcgaggaggcgggtgcgccgggcgacctgcactgcatc
ctcatttcgaaccccaacgaggacgcctggaaggatcccgccttggagaagctcagcctg
ttttgcgaggagagccgcagcgttaacgactgggtgcccagcatcaccctccccgagtga

>gi568815589f:89505122_89706076|GENSCAN_predicted_peptide_5|114_aa
MHTRMLIPCPSLGAKVLIFEVGLWMDDWAMRASPSLQTYHALSYPGALDVLVQLRELHVF
LNGDSACRADGDKAVSRHILHPVSAACFLGKSGEGAGEEGQHAVLNGLQQQTAL

>gi568815589f:89505122_89706076|GENSCAN_predicted_CDS_5|345_bp
atgcacacccgcatgcttattccatgcccttccctgggggccaaggtcctgatctttgag
gtgggcttgtggatggatgactgggctatgagggcttctccctctctccagacatatcat
gccctttcataccccggggccttggacgtgctggtccagctgcgtgaactgcatgttttc
ttgaacggcgactctgcttgcagagctgatggggacaaggctgtgtctcggcacatcctc
cacccagtctcagctgcctgcttcctgggaaagagtggcgaaggtgctggtgaggagggc
cagcatgccgtgctcaatggcctgcaacagcagacagccctgtga

>gi568815589f:89505122_89706076|GENSCAN_predicted_peptide_6|101_aa
MGGQPMAAKSLLVFLSLPERSEMQAGVCLKCQERRQQGKPTSCVYGKPEQKAPHCRWAWG
RDPNSEDSGQFTPKSHGGWPPPRSSLYNLSPSHWLPASADI

>gi568815589f:89505122_89706076|GENSCAN_predicted_CDS_6|306_bp
atggggggccagcccatggctgcaaagagcctgctggtgttcctgagcctgccagaaaga
tctgaaatgcaggcaggtgtatgtcttaaatgccaagaaaggaggcagcaagggaagccc
acaagctgtgtttatgggaaaccagaacaaaaagctcctcattgccgctgggcctggggc
cgggacccaaacagcgaggacagcgggcagttcacccccaagagccatgggggctggcct
cctcctcgttctagcttgtacaatttatctccctctcactggctccctgcttctgcagac
atctga

>gi568815589f:89505122_89706076|GENSCAN_predicted_peptide_7|412_aa
MRKLKQLPKSNDYFRSVRSLVHIKSFASQTGIPTPNSAATWKGDSHAASVRSTGIESLVA
PPGPLCQPLDCVAKPVQKHKTQAMHKKSPSPSNDLPLSVSSINRSTESVCFAAQGQNPGV
LLSLLGQLKNVHAICGMLCAKLPGMHQGEEHLVAIPEWQMLTEDKRHAGSVLHSHEALDK
AVQRAQLGLSEELSGHNLARDSLEIQTRLISPGPAKGSGHKSVEKDSEAVFRHSLSGEFV
VAAQEEGSGGDLHVDALPTQVYRKSGLFSSRPHHCEAPGTGSQGQEDWGSGLQELKASLT
IDKLPVWKQREVNKKSRCPGINPKSAPEVSSSVSVPGKAIHKTLLHLSSKPEYSSKVLLL
RISDKSWSRIWSLSPPPSPFCDGSLHKSLNKLWWDQHGRNAFNICWRSACQS

>gi568815589f:89505122_89706076|GENSCAN_predicted_CDS_7|1239_bp
atgaggaaactgaagcagttgccaaagtcaaacgactacttcagatcagtccgctccctg
gtgcacatcaaaagctttgcctctcaaacggggatccccacacccaactcagctgccaca
tggaaaggtgacagccatgcagcctctgtgagaagcacaggcatagagtctttggtggcc
cctccgggtcccctttgtcagcccctggactgtgtggccaaacctgtgcagaagcacaaa
acccaggccatgcacaaaaaaagtcctagtccaagcaatgacctcccactgagcgtctca
agcatcaaccgcagcactgaaagtgtgtgctttgccgcacagggacagaaccctggagtc
ctgctgtcactacttggtcagctgaagaacgtccatgctatctgtggaatgctgtgcgca
aagctccctggcatgcaccagggagaagagcatttggtggccataccagagtggcagatg
ctcacagaagacaaaaggcatgcaggatctgttctccacagccatgaagccctggacaaa
gctgtccagagggctcagctgggtctcagtgaggagctcagtgggcacaacctggcccgg
gactcactggagatccagaccagactcatctcccctgggccagccaagggctctgggcac
aagagtgttgagaaggattctgaggctgtgttcagacacagcctgtcaggtgagttcgtg
gtggctgcccaagaggaaggaagtggtggcgacttacatgttgatgctttgccaacccag
gtttataggaagtccggtttattctcatcaaggccccaccactgtgaggcaccaggcact
ggcagccaagggcaggaggactggggctctggcctccaggagctcaaggcctcattgaca
attgacaagcttcctgtttggaagcagagagaagtaaataagaagtccaggtgcccaggc
attaatcccaagagtgccccagaagtctcctcctcagtaagtgtccctgggaaggccatc
cacaagacgctgctgcatttgtcctccaagccagagtactcttcaaaagttttacttctt
aggatctctgataagagctggagccggatctggagcctctcacctccacccagccctttc
tgtgatggcagtttacacaaatctttaaacaaactttggtgggatcaacatggtcggaat
gctttcaacatctgctggcgttccgcatgccagtcctga

>gi568815589f:89505122_89706076|GENSCAN_predicted_peptide_8|183_aa
MEGAWLLGRTPSCLLGGEGRRCKPRTPPISSMNNTALSPKPCAMNSPDQLTQKKQYFKKT
PRLCFQISTQGVVINITTTTTITTTISITTTITTITTITTTITIITTISITTTTTITTIT
IITTISITTTTIITTITIITTISITATTTTTITTTITTVSTIITTTTITTIMTTTITIII
SNL

>gi568815589f:89505122_89706076|GENSCAN_predicted_CDS_8|552_bp
atggagggggcctggttgctgggcagaactccgagctgcctgctgggcggggaaggcagg
cgctgcaagcccaggactcctcccatcagcagcatgaacaacaccgccctgtccccgaag
ccctgtgcaatgaactcaccagatcagctgacccagaaaaagcagtatttcaagaaaact
cctcgactctgtttccaaataagtacccaaggagttgtcatcaacatcaccaccaccacc
accatcaccaccaccatctccatcaccaccaccatcaccaccataaccaccatcaccacc
accatcaccatcatcaccaccatctccatcaccaccaccaccaccatcaccaccatcacc
atcatcaccaccatctccatcaccaccaccaccatcatcaccaccatcaccatcatcacc
accatctccatcaccgccaccaccaccaccaccatcaccaccaccatcaccaccgtctcc
accatcatcaccaccaccaccatcaccactatcatgactaccaccattactatcattata
tctaacctttaa

>gi568815589f:89505122_89706076|GENSCAN_predicted_peptide_9|217_aa
MIKHTGYSLSISLPHCEMGLHPLHLEEGEMSASFISTQEVEIFRLITLITSQFSKVDTEG
DNTFDGSCRPSRAVLQQEAAAGRRSPWSAVQIFQPNKPSKGEAGADWPSRSPGSPLEPEF
PTGLVEQNVSICFVWKAQEHVDPASFNGPEYLPLALDPLCGNDTLLNRLSTSVSGIGGFL
VSLTSRKKRRTLAEKAAVSDTRNAQLLAGPAACSREQ

>gi568815589f:89505122_89706076|GENSCAN_predicted_CDS_9|654_bp
atgatcaagcatactggctattctctgagcatcagtcttccccattgtgaaatgggcctg
caccctctgcacctagaggaaggggagatgtcagcatctttcatcagcacccaggaagtg
gagattttcaggttgattacgctgatcacatcacagtttagcaaagtggacacggaggga
gacaatacctttgacgggagctgcagaccttccagggctgtcctgcagcaggaagcagct
gcaggccggagaagtccatggagtgccgtccagatattccagcccaacaaaccttctaag
ggagaagcaggcgctgactggccctcacggtcccctggctctccactggagccagagttc
ccgacaggacttgtggaacagaatgtcagcatttgctttgtctggaaagctcaagagcat
gtggatccggcctcattcaacggcccagaatatctgcccctggcattggaccctctgtgt
ggcaatgacactttgctaaatcgactctctaccagtgtgtctggaattggtgggttcttg
gtctcactgacttcaagaaagaagcggcggaccctcgccgaaaaagcagctgttagtgat
acacgcaatgcacagctgttggccgggcctgctgcctgctccagagaacaatga