Result of FASTA (omim) for pF1KB9728
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9728, 444 aa
  1>>>pF1KB9728 444 - 444 aa - 444 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.1809+/-0.000331; mu= -2.1436+/- 0.021
 mean_var=310.3040+/-62.977, 0's: 0 Z-trim(125.2): 133  B-trim: 110 in 1/56
 Lambda= 0.072808
 statistics sampled from 48440 (48577) to 48440 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.827), E-opt: 0.2 (0.57), width:  16
 Scan time:  9.600

The best scores are:                                      opt bits E(85289)
NP_001443 (OMIM: 603250) forkhead box protein F2 [ ( 444) 3121 340.8 4.4e-93
NP_001442 (OMIM: 265380,601089) forkhead box prote ( 379)  972 115.0 3.5e-25
NP_004465 (OMIM: 602211) forkhead box protein D2 [ ( 495)  663 82.6 2.5e-15
NP_004463 (OMIM: 601091) forkhead box protein D1 [ ( 465)  620 78.1 5.5e-14
NP_036315 (OMIM: 607836,611539) forkhead box prote ( 478)  575 73.4 1.5e-12
NP_004464 (OMIM: 241850,602617,616534) forkhead bo ( 373)  567 72.4 2.2e-12
NP_150285 (OMIM: 612788) forkhead box protein Q1 [ ( 403)  556 71.3 5.2e-12
NP_075555 (OMIM: 110100,605597,608996) forkhead bo ( 376)  519 67.4 7.3e-11
NP_001444 (OMIM: 601090,601631,602482) forkhead bo ( 553)  521 67.7 8.5e-11
NP_004109 (OMIM: 602939) forkhead box protein S1 [ ( 330)  507 66.1 1.6e-10
NP_001129121 (OMIM: 612351) forkhead box protein I ( 420)  505 66.0 2.2e-10
NP_004488 (OMIM: 602295) hepatocyte nuclear factor ( 350)  500 65.4 2.8e-10
NP_036316 (OMIM: 611084) forkhead box protein D4-l ( 408)  500 65.4 3.1e-10
NP_005240 (OMIM: 164874,613454) forkhead box prote ( 489)  490 64.4 7.4e-10
NP_036318 (OMIM: 107250,601094,610256) forkhead bo ( 319)  480 63.2 1.1e-09
NP_954714 (OMIM: 611085) forkhead box protein D4-l ( 416)  480 63.3 1.4e-09
NP_954586 (OMIM: 611086) forkhead box protein D4-l ( 417)  480 63.3 1.4e-09
XP_016876735 (OMIM: 602294) PREDICTED: hepatocyte  ( 439)  480 63.4 1.4e-09
NP_005241 (OMIM: 603252) forkhead box protein L1 [ ( 345)  477 62.9 1.5e-09
NP_004487 (OMIM: 602294) hepatocyte nuclear factor ( 472)  480 63.4 1.5e-09
NP_005242 (OMIM: 153400,602402) forkhead box prote ( 501)  480 63.4 1.6e-09
NP_710141 (OMIM: 600288) hepatocyte nuclear factor ( 457)  475 62.8 2.1e-09
NP_068556 (OMIM: 600288) hepatocyte nuclear factor ( 463)  475 62.8 2.1e-09
NP_997188 (OMIM: 601092) forkhead box protein D4 [ ( 439)  472 62.5 2.5e-09
NP_036320 (OMIM: 274600,600791,601093) forkhead bo ( 378)  425 57.5 6.9e-08
XP_011513493 (OMIM: 616302) PREDICTED: forkhead bo ( 570)  421 57.3 1.3e-07
NP_001032242 (OMIM: 616302) forkhead box protein K ( 733)  421 57.3 1.5e-07
NP_003914 (OMIM: 603621) forkhead box protein H1 [ ( 365)  412 56.1 1.7e-07
NP_004505 (OMIM: 147685) forkhead box protein K2 [ ( 660)  404 55.5 4.8e-07
XP_016856182 (OMIM: 616035) PREDICTED: forkhead bo ( 573)  369 51.8 5.6e-06
NP_001185781 (OMIM: 616035) forkhead box protein J ( 588)  369 51.8 5.7e-06
XP_006710522 (OMIM: 616035) PREDICTED: forkhead bo ( 596)  369 51.8 5.7e-06
XP_006710521 (OMIM: 616035) PREDICTED: forkhead bo ( 607)  369 51.8 5.8e-06
NP_001185780 (OMIM: 616035) forkhead box protein J ( 622)  369 51.8 5.9e-06
NP_001185779 (OMIM: 616035) forkhead box protein J ( 622)  369 51.8 5.9e-06
NP_055762 (OMIM: 616035) forkhead box protein J3 i ( 622)  369 51.8 5.9e-06
XP_011539328 (OMIM: 616035) PREDICTED: forkhead bo ( 622)  369 51.8 5.9e-06
XP_005270689 (OMIM: 616035) PREDICTED: forkhead bo ( 630)  369 51.8   6e-06
NP_001445 (OMIM: 602291) forkhead box protein J1 [ ( 421)  356 50.3 1.1e-05
NP_001230018 (OMIM: 602341) forkhead box protein M ( 747)  334 48.2 8.6e-05
NP_973732 (OMIM: 602341) forkhead box protein M1 i ( 748)  334 48.2 8.7e-05
NP_001230017 (OMIM: 602341) forkhead box protein M ( 748)  334 48.2 8.7e-05
XP_011519233 (OMIM: 602341) PREDICTED: forkhead bo ( 749)  334 48.2 8.7e-05
XP_011523671 (OMIM: 600838,601705) PREDICTED: fork ( 436)  319 46.4 0.00017
XP_011523670 (OMIM: 600838,601705) PREDICTED: fork ( 436)  319 46.4 0.00017
XP_011523672 (OMIM: 600838,601705) PREDICTED: fork ( 436)  319 46.4 0.00017
XP_011523669 (OMIM: 600838,601705) PREDICTED: fork ( 462)  319 46.5 0.00018
XP_005258103 (OMIM: 600838,601705) PREDICTED: fork ( 648)  319 46.6 0.00023
NP_003584 (OMIM: 600838,601705) forkhead box prote ( 648)  319 46.6 0.00023
XP_016880717 (OMIM: 600838,601705) PREDICTED: fork ( 648)  319 46.6 0.00023


>>NP_001443 (OMIM: 603250) forkhead box protein F2 [Homo  (444 aa)
 initn: 3121 init1: 3121 opt: 3121  Z-score: 1792.1  bits: 340.8 E(85289): 4.4e-93
Smith-Waterman score: 3121; 100.0% identity (100.0% similar) in 444 aa overlap (1-444:1-444)

               10        20        30        40        50        60
pF1KB9 MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 SSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 LTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 GGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 GGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPGASPYLKQPPALTPSSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPGASPYLKQPPALTPSSN
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 PAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFH
              370       380       390       400       410       420

              430       440    
pF1KB9 PSASGSYYHHHHQSVCQDIKPCVM
       ::::::::::::::::::::::::
NP_001 PSASGSYYHHHHQSVCQDIKPCVM
              430       440    

>>NP_001442 (OMIM: 265380,601089) forkhead box protein F  (379 aa)
 initn: 1115 init1: 819 opt: 972  Z-score: 573.1  bits: 115.0 E(85289): 3.5e-25
Smith-Waterman score: 1300; 55.0% identity (72.4% similar) in 413 aa overlap (66-444:2-379)

          40        50        60        70        80               
pF1KB9 AAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGA-------
                                     .:::       ::::.:.:.:::       
NP_001                              MSSAPEKQQPPHGGGGGGGGGGGAAMDPASS
                                            10        20        30 

            90       100       110       120       130       140   
pF1KB9 -----KKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQG
            ::...:.::::::::::::::::::::::.:::::::::::::.:::::::.:::
NP_001 GPSKAKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQG
              40        50        60        70        80        90 

           150       160       170       180       190       200   
pF1KB9 WKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQAL
             100       110       120       130       140       150 

           210       220       230         240           250       
pF1KB9 KPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGC--HSQGGYGGLDMM----PAGYDAGA
       ::::  ...::::.   ::. . ::.  .. :.:  .: .  ::: ::    :.. : : 
NP_001 KPMYS-MMNGLGFNH--LPDTYGFQGSAGG-LSCPPNSLALEGGLGMMNGHLPGNVD-GM
              160         170        180       190       200       

       260       270       280       290       300       310       
pF1KB9 GAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPV
       . :::.         :::.  : : .::..:            ::...:.: :  .:: :
NP_001 ALPSHS---------VPHLPSNGGHSYMGGC------------GGAAAGEY-PHHDSS-V
        210                220                   230        240    

       320           330       340              350       360      
pF1KB9 PSSPAMASA----IECHSPYTSPAAHWSSPGASP-------YLKQPPALTPSSNPAASAG
       :.:: . ..    .: :. :.. :: :  :.::        :.:: : :.:  ::::.  
NP_001 PASPLLPTGAGGVMEPHAVYSGSAAAWP-PSASAALNSGASYIKQQP-LSPC-NPAANP-
           250       260       270        280        290           

        370       380          390       400       410         420 
pF1KB9 LHSSMSSYSLEQSYLHQNARE---DLSVGLPRYQHHSTPVCDRKDFVLNFNGI--SSFHP
       : .:.:..:::: :::::...   .:. :.:::. .:  .::::.::..::..  ::.: 
NP_001 LSGSLSTHSLEQPYLHQNSHNAPAELQ-GIPRYHSQSPSMCDRKEFVFSFNAMASSSMHS
     300       310       320        330       340       350        

             430       440    
pF1KB9 SASGSYYHHHHQSVCQDIKPCVM
       ...:::::.  : . ::::::::
NP_001 AGGGSYYHQ--QVTYQDIKPCVM
      360         370         

>>NP_004465 (OMIM: 602211) forkhead box protein D2 [Homo  (495 aa)
 initn: 616 init1: 521 opt: 663  Z-score: 396.1  bits: 82.6 E(85289): 2.5e-15
Smith-Waterman score: 663; 37.7% identity (57.7% similar) in 366 aa overlap (5-355:36-386)

                                         10        20        30    
pF1KB9                           MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAA
                                     ::  ::   :.   .:  .      ::   
NP_004 CCCEIMSSESSPAALSEADADIDVVGGGSGGGELPA---RSGPRAPRDVLPHGHEPPAEE
          10        20        30        40           50        60  

           40        50        60           70        80        90 
pF1KB9 AAAAAAAPETTSSSSSSSSASCASSSSSSNSASAP---SAACKSAGGGGAGAGSGGAKKA
       : :  :  :  :.. :..     .: ... .:..:   .:: ..:.: : :  ::::   
NP_004 AEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGA---
             70        80        90       100       110            

              100       110       120       130       140       150
pF1KB9 SSGLRRPE-KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRH
         . : :  ::::::::::.::: .::.:::::::: .:...:::..:  . .:.::.::
NP_004 --ATRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRH
       120       130       140       150       160       170       

              160       170       180       190       200       210
pF1KB9 NLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRV
       :::::.::.:.:.  : ::::.:::.:: :  ::..::: :: . :.:  : : : . . 
NP_004 NLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR--QPLPPPHPH-
       180       190       200       210       220         230     

              220       230        240        250       260        
pF1KB9 VSGLGFGASLLPQGFDFQAPPSAPL-GCHSQGGYG-GLDMMPAGYDAGAGAPS-HAHPHH
                ::  :    . :.: : :  . :.:: :  .   .: :   .:. : ::: 
NP_004 --PHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHP
            240       250       260       270       280       290  

       270       280           290       300       310       320   
pF1KB9 HHHHHVPHMSPNPGSTYM----ASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSS---
       :    .   .  : .  .    :. : :. : .   ::.:..   .: :.:.: :.    
NP_004 HAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGL
            300       310       320       330       340       350  

               330       340       350       360       370         
pF1KB9 PAMASA-IECHSPYTSPAAHWSSPGASPYLKQPPALTPSSNPAASAGLHSSMSSYSLEQS
       ::. .: . : . .   ::  : :.:.     : ::                        
NP_004 PAFLGAELGCAKAFY--AASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRP
            360         370       380       390       400       410

     380       390       400       410       420       430         
pF1KB9 YLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDI
                                                                   
NP_004 SFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLS
              420       430       440       450       460       470

>>NP_004463 (OMIM: 601091) forkhead box protein D1 [Homo  (465 aa)
 initn: 528 init1: 528 opt: 620  Z-score: 372.1  bits: 78.1 E(85289): 5.5e-14
Smith-Waterman score: 681; 40.4% identity (59.1% similar) in 369 aa overlap (58-383:83-448)

        30        40        50        60        70        80       
pF1KB9 MSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGG
                                     ...: .  . :: ::  .:::::.:.:.::
NP_004 RRRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAP-AAGAGAGGGGGGGGAGG
             60        70        80        90        100       110 

        90        100       110       120       130       140      
pF1KB9 AKKASSGLRRPE-KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKN
       . .:.:: . :  ::::::::::.::: .::.:::::::: .:...:::..:  . .:.:
NP_004 GGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQN
             120       130       140       150       160       170 

        150       160       170       180       190       200      
pF1KB9 SVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPM
       :.:::::::.::.:.:.  : ::::.:::.:: :  ::..::: :: . :.:.   : : 
NP_004 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQ-PLLPPN
             180       190       200       210       220        230

        210       220            230       240            250      
pF1KB9 YHRVVSGLGFGASLLPQGFDFQA-----PPSAPLGCHSQG-G-YG---GLDMMP-----A
          . : :  ::.    . :  :     ::. :   :. : : ::   ::.. :     :
NP_004 AAAAESLLLRGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPYAPPSA
              240       250       260       270       280       290

             260         270       280        290              300 
pF1KB9 GYDAGAGAPSHA--HPHHHHHHHVPHMSPNP-GSTYMASCPVPAG---PGGVGA----AG
        . :.:.: . :  :::       :: .    . : ..  : : :   :: . :    ::
NP_004 LFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAG
              300       310       320       330       340       350

                            310       320       330       340      
pF1KB9 GGG---------------GGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPG--
       : :               ::. :: .... . .. : :.:    :: ..: :  :: :  
NP_004 GPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGC
              360       370       380       390       400       410

          350       360       370       380       390       400    
pF1KB9 ASPYLKQPPALTPSSNPAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVC
       :.     : :    :  ::.:.  ::.:: :   . :::                     
NP_004 AAQAAVGPAAALTRSLVAAAAAAASSVSS-SAALGTLHQGTALSSVENFTARISNC    
              420       430        440       450       460         

          410       420       430       440    
pF1KB9 DRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDIKPCVM

>>NP_036315 (OMIM: 607836,611539) forkhead box protein D  (478 aa)
 initn: 558 init1: 504 opt: 575  Z-score: 346.4  bits: 73.4 E(85289): 1.5e-12
Smith-Waterman score: 603; 33.4% identity (58.7% similar) in 395 aa overlap (3-381:46-417)

                                           10        20        30  
pF1KB9                             MTTEGGPPPAPLRRACSPVPGALQAALMSPP-
                                     . .:::   : .:    :.: . .  .:: 
NP_036 TVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPHHGQPQPPH
          20        30        40        50        60        70     

                    40        50        60        70        80     
pF1KB9 ------PAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGS
             :  ::.:.:.:   .. ..  . .: .. .. ....       :.:: :::.::
NP_036 QQPLTLPKEAAGAGAGP--GGDVGAPEADGCKGGVGGEEGGA-------SGGGPGAGSGS
          80        90         100       110              120      

          90       100       110       120       130       140     
pF1KB9 GGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWK
       .:.   :.      ::::::::::.::: .::.:.:::: : .:.. :::..:  . .:.
NP_036 AGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQ
        130       140       150       160       170       180      

         150       160       170       180       190       200     
pF1KB9 NSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQA-LK
       ::.:::::::.::.:.:.  : ::::.:::.:: :: ::..::: :: . :.:. :  :.
NP_036 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLR
        190       200       210       220       230       240      

          210       220       230       240       250       260    
pF1KB9 PMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAH
        .   ...  .:::  :  .    .: . : : :  .. :. .  ::.  :.:.: .  .
NP_036 EQTALMMQ--SFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSH-PAAAAAAAAAAALQY
        250         260       270       280        290       300   

          270       280       290        300       310       320   
pF1KB9 PHHHHHHHVPHMSPNPGSTYMASCPVPAGPGG-VGAAGGGGGGDYGPDSSSSPVPSSPAM
       :.      .: ..:      .    ::  :.: .:  ... :.. ::  . .    . : 
NP_036 PYA-----LPPVAP------VLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAA
                310             320       330       340       350  

           330       340       350              360       370      
pF1KB9 ASAIECHSPYTSPAAHWSSPGASPYLK-------QPPALTPSSNPAASAGLHSSMSSYSL
       :.:    .  :. .   : :.: : ..        : :   :.  :. ::  .. .. : 
NP_036 AAAGTAGAAGTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGST
            360       370       380       390       400       410  

        380       390       400       410       420       430      
pF1KB9 EQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVC
        ::.:                                                       
NP_036 AQSFLRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQ
            420       430       440       450       460       470  

>>NP_004464 (OMIM: 241850,602617,616534) forkhead box pr  (373 aa)
 initn: 579 init1: 473 opt: 567  Z-score: 343.3  bits: 72.4 E(85289): 2.2e-12
Smith-Waterman score: 570; 35.2% identity (61.0% similar) in 318 aa overlap (70-374:25-325)

      40        50        60        70        80        90         
pF1KB9 AAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPE
                                     .::  .. : ..: :.:: .. .  :.:  
NP_004       MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGG-RRRKRPLQRG-
                     10        20        30        40         50   

     100       110       120       130       140       150         
pF1KB9 KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI
       ::::::::::.:::  .: .::::. ::.:.  ::::.:   . :.::.::::.::.::.
NP_004 KPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFL
             60        70        80        90       100       110  

     160       170       180       190       200        210        
pF1KB9 KLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMY-HRVVSGLGFGA
       :.:.  ::::::.::..:: .: ::: ::: :: . :.:.  .  : : : .... . .:
NP_004 KIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAA
            120       130       140       150       160       170  

      220       230       240       250       260       270        
pF1KB9 SLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSP
       .    .  :  : ..:    ..  :      :..  :: . :: : :   ..   :  ::
NP_004 AAAAAAAIF--PGAVPA---ARPPY------PGAVYAGYAPPSLAAPPPVYY---PAASP
            180            190             200       210           

      280       290       300       310       320          330     
pF1KB9 NPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSS---PAMASAIECHSPYTS
       .:  ..      : .:  .: : .: ::. .  :...:. ..   ::  .. .  .: . 
NP_004 GPCRVFGLVPERPLSPE-LGPAPSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAY
      220       230        240       250       260       270       

         340       350              360         370       380      
pF1KB9 PAAHWSSPGASPYLKQPPALT-------PSSNPA--ASAGLHSSMSSYSLEQSYLHQNAR
        ::. .  :: :       ..       :.: ::  .:.:...... :            
NP_004 AAAYAGPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGVETTVDFYGRTSPGQFGALG
       280       290       300       310       320       330       

        390       400       410       420       430       440    
pF1KB9 EDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDIKPCVM
                                                                 
NP_004 ACYNPGGQLGGASAGAYHARHAAAYPGGIDRFVSAM                      
       340       350       360       370                         

>>NP_150285 (OMIM: 612788) forkhead box protein Q1 [Homo  (403 aa)
 initn: 497 init1: 379 opt: 556  Z-score: 336.6  bits: 71.3 E(85289): 5.2e-12
Smith-Waterman score: 565; 33.8% identity (56.5% similar) in 379 aa overlap (5-364:25-386)

                                   10        20        30        40
pF1KB9                     MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAA
                               :.  :.::  : .   :.      . : :...:  .
NP_150 MKLEVFVPRAAHGDKQGSDLEGAGGSDAPSPLSAAGDDSLGSDGDCAANSPAAGGGARDT
               10        20        30        40        50        60

               50        60        70        80        90       100
pF1KB9 APETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEK
         .  .:.... .:  :  .... .. : .:   .:: :..::::: . ...   ::: :
NP_150 QGDGEQSAGGGPGAEEAIPAAAAAAVVAEGAEAGAAGPGAGGAGSGEGARSKPYTRRP-K
               70        80        90       100       110          

              110       120       130       140       150       160
pF1KB9 PPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIK
       :::::::::.:::..: . ::::.:: ..:...::::::.: ::.::::::::::.::.:
NP_150 PPYSYIALIAMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVK
     120       130       140       150       160       170         

               170       180       190       200       210         
pF1KB9 LPKGLGRP-GKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRV-VSGLGFGA
       . .  .:: :: .:: ..: ::. : .: ::::    :..      . ::. : . :.  
NP_150 VLRDPSRPWGKDNYWMLNPNSEYTFADGVFRRR----RKR------LSHRAPVPAPGLRP
     180       190       200       210                 220         

      220       230       240       250       260         270      
pF1KB9 SLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPH--HHHHHHVPHM
          : :.   ::: :: .  :    .   .   .  ::  . : :     ..  .     
NP_150 EEAP-GLP-AAPPPAPAAPASPRMRSPARQEERASPAGKFSSSFAIDSILRKPFRSRRLR
     230         240       250       260       270       280       

        280           290       300                  310       320 
pF1KB9 SPNPGSTYM---ASCP-VPAGPGGVGAA-----------GGGGGGDYGPDSSSSPVPSSP
       .  ::.: .   : :: .:: :. . ::           :.:  .  :   .  : :..:
NP_150 DTAPGTTLQWGAAPCPPLPAFPALLPAAPCRALLPLCAYGAGEPARLGAREAEVP-PTAP
       290       300       310       320       330       340       

             330       340       350       360       370       380 
pF1KB9 AMASAIECHSPYTSPAAHWSSPGASPYLKQPPALTPSSNPAASAGLHSSMSSYSLEQSYL
        .  :     : ..::    .:.:.      :   :..  :::                 
NP_150 PLLLA---PLPAAAPAKPLRGPAAGGAHLYCPLRLPAALQAASVRRPGPHLPYPVETLLA
        350          360       370       380       390       400   

             390       400       410       420       430       440 
pF1KB9 HQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDIKP

>>NP_075555 (OMIM: 110100,605597,608996) forkhead box pr  (376 aa)
 initn: 474 init1: 449 opt: 519  Z-score: 316.0  bits: 67.4 E(85289): 7.3e-11
Smith-Waterman score: 571; 34.3% identity (53.4% similar) in 399 aa overlap (30-389:6-376)

               10        20        30        40        50        60
pF1KB9 MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSS
                                    : :  ::.:  ::::                
NP_075                         MMASYPEPEDAAGALLAPET----------------
                                       10        20                

               70        80        90       100       110       120
pF1KB9 SSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKR
         . ... : .   : : ::.:.:. . .: . .    .::::::.:::.:::. :  ::
NP_075 --GRTVKEPEGPPPSPGKGGGGGGGTAPEKPDPA----QKPPYSYVALIAMAIRESAEKR
                 30        40        50            60        70    

              130       140       150       160       170       180
pF1KB9 LTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAS
       :::: :::.. :.:::..   .::.::.::::::::::::.:.  :   ::.:::.::: 
NP_075 LTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPAC
           80        90       100       110       120       130    

              190          200          210        220       230   
pF1KB9 EFMFEEGSFRRR---PRGFRRKCQALKP---MYHRVVSGLGFG-ASLLPQGFDFQAPP--
       : :::.:..:::    : ::     ..:   ..    .. : : :.   .:. . :::  
NP_075 EDMFEKGNYRRRRRMKRPFRPPPAHFQPGKGLFGAGGAAGGCGVAGAGADGYGYLAPPKY
          140       150       160       170       180       190    

                      240       250       260       270       280  
pF1KB9 --------SAPLGCH-SQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGS
               : ::    :   :.. .:  :.  :.:.: . : :       : .   .:..
NP_075 LQSGFLNNSWPLPQPPSPMPYASCQMAAAAA-AAAAAAAAAGPGSPGAAAVVKGLAGPAA
          200       210       220        230       240       250   

                 290       300       310       320       330       
pF1KB9 TY-----MASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPA
       .:     . :  .:  :: :.. .: ::   .:     : :  :         .:  .: 
NP_075 SYGPYTRVQSMALP--PGVVNSYNGLGGPPAAPPPPPHPHPH-PHAHHLHAAAAPPPAPP
           260         270       280       290        300       310

       340              350       360                370       380 
pF1KB9 AHWSS---PG----ASPYLKQPPALTPSSNPAAS---------AGLHSSMSSYSLEQSYL
        : ..   ::    :::    ::: .:.: :. .         : .: :. ... . . :
NP_075 HHGAAAPPPGQLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMHCSYWDHDSKTGAL
              320       330       340       350       360       370

             390       400       410       420       430       440 
pF1KB9 HQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDIKP
       :  .: ::                                                    
NP_075 H--SRLDL                                                    
                                                                   

>>NP_001444 (OMIM: 601090,601631,602482) forkhead box pr  (553 aa)
 initn: 621 init1: 481 opt: 521  Z-score: 314.9  bits: 67.7 E(85289): 8.5e-11
Smith-Waterman score: 557; 37.4% identity (56.5% similar) in 329 aa overlap (67-393:48-332)

         40        50        60        70        80        90      
pF1KB9 AAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLR
                                     : :. : .  :: . . :    .   . . 
NP_001 YLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGMARAYGPYTPQPQPKDMV
        20        30        40        50        60        70       

        100       110       120       130       140       150      
pF1KB9 RPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNE
          ::::::::::.::::..:.:..::. ::::.. ::::.:   :::.::.::::::::
NP_001 ---KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNE
           80        90       100       110       120       130    

        160       170       180       190       200       210      
pF1KB9 CFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGF
       ::.:.:.   .:::: :::.:: :  :::.::: :: : :..: .:.:   ..    :  
NP_001 CFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKK-DAVKDKEEKDRLHLKE
          140       150       160       170        180       190   

        220       230       240       250       260       270      
pF1KB9 GASLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHM
            : :   . :: ::               :   :..: .:   .:        : .
NP_001 PP---PPG---RQPPPAP---------------PEQADGNAPGP---QP--------PPV
                 200                      210                  220 

        280       290       300       310       320       330      
pF1KB9 SPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSP
         .  .:  ..:: :  : . .:: :.:..   : .  ::  :: ...:.     : . :
NP_001 RIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVP-KIESPDSSSSSLSSG--SSPPGSLP
             230       240       250        260       270          

         340       350       360        370       380       390    
pF1KB9 AAH-WSSPGASPYLKQPPALTPSSNPAA-SAGLHSSMSSYSLEQSYLHQNAREDLSVGLP
       .:.  :  ::.   . ::  .::. :   : :.  .    ::. :   :.:  .:: :: 
NP_001 SARPLSLDGAD---SAPPPPAPSAPPPHHSQGFSVDNIMTSLRGS--PQSAAAELSSGLL
      280          290       300       310       320         330   

          400       410       420       430       440              
pF1KB9 RYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDIKPCVM          
                                                                   
NP_001 ASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTY
           340       350       360       370       380       390   

>>NP_004109 (OMIM: 602939) forkhead box protein S1 [Homo  (330 aa)
 initn: 488 init1: 463 opt: 507  Z-score: 309.9  bits: 66.1 E(85289): 1.6e-10
Smith-Waterman score: 507; 37.8% identity (59.1% similar) in 286 aa overlap (98-366:16-283)

        70        80        90       100       110       120       
pF1KB9 APSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIY
                                     : ::::::::::.:::::::..: ::: ::
NP_004                MQQQPLPGPGAPTTEPTKPPYSYIALIAMAIQSSPGQRATLSGIY
                              10        20        30        40     

       130       140       150       160       170       180       
pF1KB9 QFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEG
       .....:: :.:    ::.::.::::::::::.:.:.   .:::: :::.::  . :::.:
NP_004 RYIMGRFAFYRHNRPGWQNSIRHNLSLNECFVKVPRDDRKPGKGSYWTLDPDCHDMFEHG
          50        60        70        80        90       100     

       190       200          210           220       230       240
pF1KB9 SFRRRPRGFRRKCQALK---PMYHRV----VSGLGFGASLLPQGFDFQAPPSAPLGCHSQ
       :: :: : : :.  :     :   :     ...   :.     : . . ::  :     .
NP_004 SFLRRRRRFTRQTGAEGTRGPAKARRGPLRATSQDPGVPNATTGRQCSFPPELP---DPK
         110       120       130       140       150          160  

                250       260       270       280           290    
pF1KB9 G-GYGGL-DMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCP----VPAGP
       : ..:::   :::..     : . ..:.       : : :.  ::   .::    : .. 
NP_004 GLSFGGLVGAMPASM---CPATTDGRPR-------PPMEPKEISTPKPACPGELPVATSS
            170          180              190       200       210  

          300       310        320         330       340       350 
pF1KB9 GGVGAAGGGGGGDYGPDSSSSPVPS-SP--AMASAIECHSPYTSPAAHWSSPGASPYLKQ
       ..  : :  .: . . . ...:.:  ::  ...:. .:.      : ..   ::.: :..
NP_004 SSCPAFGFPAGFSEAESFNKAPTPVLSPESGIGSSYQCRLQ----ALNFCM-GADPGLEH
            220       230       240       250            260       

              360       370       380       390       400       410
pF1KB9 PPA-LTPSSNPAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFV
         :  .::  : .  :                                            
NP_004 LLASAAPSPAPPTPPGSLRAPLPLPTDHKEPWVAGGFPVQGGSGYPLGLTPCLYRTPGMF
       270       280       290       300       310       320       




444 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 01:09:42 2016 done: Sat Nov  5 01:09:43 2016
 Total Scan time:  9.600 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com