GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:31:12

Sequence gi568815594r:152222884_152452730 : 229847 bp : 37.84% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4155   4388  234  2  0   58  -11   164 0.497   0.46
 1.02 Intr +   5315   5429  115  1  1   90   98    33 0.758   3.60
 1.03 Term +   7558   7682  125  2  2  102   42   120 0.967   6.37
 1.04 PlyA +   7782   7787    6                               1.05

 2.00 Prom +  14497  14536   40                              -1.65
 2.01 Init +  21969  22163  195  2  0   69  108   172 0.301  16.55
 2.02 Term +  24719  25129  411  1  0   33   38   199 0.110   3.66
 2.03 PlyA +  25303  25308    6                               1.05

 3.00 Prom +  25912  25951   40                              -5.05
 3.01 Init +  29425  29602  178  0  1   71   75    72 0.383   3.67
 3.02 Intr +  33345  33535  191  1  2  110  103    94 0.432  11.48
 3.03 Term +  33752  33997  246  1  0   71   52   119 0.206   1.41
 3.04 PlyA +  34272  34277    6                               1.05

 4.03 PlyA -  34359  34354    6                               1.05
 4.02 Term -  35456  35299  158  0  2   63   39   142 0.077   3.91
 4.01 Init -  36293  36230   64  2  1   66   44    75 0.461   2.26
 4.00 Prom -  42777  42738   40                              -3.75

 5.10 PlyA -  43576  43571    6                               1.05
 5.09 Term -  47990  47793  198  2  0   73   48   111 0.521   2.02
 5.08 Intr -  48424  48242  183  1  0   63   72   165 0.931  11.46
 5.07 Intr -  49687  49655   33  1  0   72  111    23 0.538   0.50
 5.06 Intr -  53068  53029   40  0  1   80  103    26 0.286   0.61
 5.05 Intr -  56584  56462  123  0  0   72   33   106 0.178   2.28
 5.04 Intr -  56843  56787   57  1  0  100   77    65 0.207   3.68
 5.03 Intr -  59614  59479  136  2  1  116  -30   115 0.490   1.21
 5.02 Intr -  60704  60556  149  1  2  101   61   110 0.974   8.56
 5.01 Init -  62454  62204  251  0  2   86   99   127 0.929  10.30
 5.00 Prom -  65013  64974   40                              -7.15

 6.00 Prom +  70221  70260   40                              -5.35
 6.01 Init +  70939  70999   61  0  1   63   66    76 0.435   3.05
 6.02 Intr +  76523  76705  183  0  0   65   52   112 0.231   4.14
 6.03 Intr +  81989  82123  135  0  0   73   55    66 0.062   1.42
 6.04 Intr +  84873  85016  144  1  0   47   49   180 0.074   9.33
 6.05 Term +  95464  95627  164  2  2  110   36    78 0.175   1.92
 6.06 PlyA +  96151  96156    6                               1.05

 7.19 PlyA -  96171  96166    6                               1.05
 7.18 Term - 100266  99998  269  1  2   91   49   248 0.980  15.87
 7.17 Intr - 101511 101301  211  0  1   51  115   157 0.999  12.26
 7.16 Intr - 103348 103123  226  0  1  114  110    90 0.684  10.86
 7.15 Intr - 105506 105325  182  2  2    8  116   108 0.997   3.34
 7.14 Intr - 106902 106789  114  0  0  102  106    51 0.990   8.02
 7.13 Intr - 107985 107849  137  1  2   24   88    77 0.888   0.67
 7.12 Intr - 109836 109713  124  0  1   50   86   132 0.879   8.44
 7.11 Intr - 115053 114919  135  0  0   60   88    47 0.673   1.74
 7.10 Intr - 119539 119471   69  1  0   44   25   124 0.208   0.16
 7.09 Intr - 124188 124047  142  2  1  107   61    90 0.903   7.63
 7.08 Intr - 127241 127159   83  2  2   85   85    20 0.931  -1.08
 7.07 Intr - 159483 159306  178  2  1   13  114   106 0.502   4.70
 7.06 Intr - 170864 170796   69  1  0   25   83    96 0.011   0.18
 7.05 Intr - 178645 178569   77  1  2   98   45    47 0.053  -1.21
 7.04 Intr - 188989 188420  570  1  0  102   87   783 0.855  71.63
 7.03 Intr - 203855 203749  107  0  2   50   41    95 0.227   0.01
 7.02 Intr - 205615 205557   59  0  2   46   99    53 0.287  -0.19
 7.01 Init - 210569 210424  146  2  2  123   36    74 0.340   5.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 129742 129587  156  1  0   59  106    61 0.923   4.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:152222884_152452730|GENSCAN_predicted_peptide_1|157_aa
ISSLDPEQGRELTGHQPDGGRPGNSCALSATPRAIPDPVSCCGSSWMWSYLLFPFAASKA
GEMGGAATGAHSPSPLGLQTLKERDNDQCTANTIENKIKQPGAVTHACNPSILEGQANLV
PVLPPDLLEQAAVSVGDCPQSVLVWPELGIQKGYGST

>gi568815594r:152222884_152452730|GENSCAN_predicted_CDS_1|474_bp
ataagcagtttggacccagaacagggaagggagttgaccggtcaccagccagatggtggc
aggccagggaactcctgtgctctttctgctaccccacgggccatccctgatcccgtgtcc
tgctgtggcagctcctggatgtggagttacctgctattccctttcgcagcatcaaaagca
ggggagatgggaggagctgccactggcgcccacagcccttctcctcttggccttcaaaca
ttaaaagaaagagacaatgatcaatgcacagcaaacaccattgaaaacaaaataaagcag
ccaggtgcagtgactcatgcctgtaatcccagcattttggaaggccaagcaaacctggtt
cctgtactgcctcctgatctcctggagcaggctgctgtgtcagtgggtgattgtccccag
tcagtgttggtgtggccagaactgggaatccagaagggctatggctccacatag

>gi568815594r:152222884_152452730|GENSCAN_predicted_peptide_2|201_aa
MPCQLLAQQFQLQAALIQSDALAPDLMPAPGSVLVAADVPSPLSSSPLLYPLPLNEKHEE
DCEGQQRQRLPSSGHRNKSFICQPGCSGPGTQPASLSVEITQPGSLSPARIPGARASLQR
QHLISLGPQQTQSGIQLPPPERGGQCLGLTSSCRPSFWRPNSPFPSECGRASQGGHVTPH
PPKVEFPLAVTPLNVSGVLPS

>gi568815594r:152222884_152452730|GENSCAN_predicted_CDS_2|606_bp
atgccctgtcagctccttgcccagcagttccagctgcaggctgccctgatccagtctgat
gctctggcaccggatctgatgccagccccaggctcagtcctggttgcagctgacgttccc
tctcctctttcttcttctcccctcctttaccctctccctctcaatgaaaaacatgaagag
gattgtgaggggcaacaaagacagcgcctcccaagctcaggacacaggaacaagtcattc
atctgccagccaggatgcagcggccccgggacccagccagcgagcttgtcagtagaaatt
actcagcctggcagcctctctcccgcccgcattcccggagccagagcctctctgcagagg
cagcacctgatctccctggggccgcagcagacgcagtctggaatccagctccctccgcca
gagaggggtggccaatgccttggcctgacctccagctgccgccccagcttctggaggccc
aattctccctttccgtctgaatgtggaagagcaagccaagggggccatgtcaccccacat
cctccaaaagtggagttcccgttggcagtgacccccctgaatgtgtccggggtgctcccg
agctaa

>gi568815594r:152222884_152452730|GENSCAN_predicted_peptide_3|204_aa
MIAEWYYESMFSFIRNCQTIFQRGCTILHSHQQGMRVPVAPYSHGPLVLSVFWILAILIV
PAYDLSSSATSLAAASQSSLLVPPYFPIILPLECHKAQDVASLLCHHSLGGFQQSQGLLT
HQHDKILGVVFVFFSLIYPISSPLAKTVGCSSKYIENLTTFHWLHCQHPDVRCHPLSSGG
SRLPAGLLLPPLPAQKLRSTQQTQ

>gi568815594r:152222884_152452730|GENSCAN_predicted_CDS_3|615_bp
atgattgctgaatggtattatgagagcatgtttagttttataagaaactgccaaactatc
ttccaaagaggctgtaccattttgcattcccatcagcaaggaatgagagttcctgttgct
ccatattctcacggacctttggtgttgtcagtgttctggattttggccattctaatagtc
cctgcttatgacctctcttcttctgcgacatcactggctgctgcttctcagtcttctttg
ctggttcctccttacttccccatcatcctgccattggagtgccataaggctcaggacgtg
gcttctcttctgtgtcaccactccctaggtggcttccagcagtctcaaggccttctcaca
caccagcatgacaaaatccttggagtcgtctttgtctttttttctctcatataccctata
tcctctccattagcaaagactgttggctgttcctccaaatatattgagaatcttaccact
ttccactggcttcactgccagcaccccgatgtgagatgccatcccctgtcctccggagga
agccgcctccctgcgggtctcctgcttccaccgcttcccgctcagaagctgcgctcaaca
cagcagacacagtga

>gi568815594r:152222884_152452730|GENSCAN_predicted_peptide_4|73_aa
MSTQGALLEVLTKPSTQMKTNGHLSGKVERHGRDALKDALQLLSIVILWFYNEDQGEVGL
WNLWTIKGFRQPF

>gi568815594r:152222884_152452730|GENSCAN_predicted_CDS_4|222_bp
atgtccactcaaggagccctgctggaggtgctcacaaaaccttcaacacagatgaaaacg
aatggacacttaagtgggaaggtggaacgccacggacgagatgcactcaaagatgccctc
cagctccttagcattgtgattctttggttctataatgaagatcaaggagaagtaggatta
tggaatttgtggacaataaaaggatttaggcagcccttttag

>gi568815594r:152222884_152452730|GENSCAN_predicted_peptide_5|389_aa
MTHWRTRPGSQPPRVSVGLGGSPVLPGGAEITLIVQKLYDGDRLSLEVQQETEASELYGA
PTVCQAPCNGLLWRPAPAIFTTLRHMDGPGSHYLQQTNAGTENQTRHLLTYKWELNNENT
WTQGEEKHTLGPAGTSQERELEKLYPKGHNADRCVGDDCVNEESPPQRRTFPLLQYFSNL
AAVGGDAPGDTLKVWVQWIIRSQCRARPYPPKRPTLLPRAYRMWGRRGLLRLTPTLELRG
TRGDSGPWNLDSKGVRAQCRQDQFEMVDDNRRLRSGVAAEQEPGGESMAQEGEEGSPVAS
EAKGPKAATETRSVDSGGQCREQWLWGLLIPFVLSLNGHPQLLLAEDHSPIVHGEPSASR
SIHSGFYIDYLGHCGILNCTPCRRLLVSS

>gi568815594r:152222884_152452730|GENSCAN_predicted_CDS_5|1170_bp
atgactcactggagaaccaggccaggatcccaaccaccccgtgtctcagtgggcctgggc
gggagccctgtgctgccaggaggagcagagataacattgattgtccagaagctctacgat
ggagacaggttgtcattggaagtccaacaagagacagaggcaagtgagctttatggagca
cctactgtgtgccaggccccatgcaacgggcttctgtggaggcctgcccctgccatcttc
acaaccctcaggcacatggatggacctggaagccattatcttcagcaaactaatgcagga
acagaaaaccaaacacggcatcttctcacttacaagtgggagctgaacaatgagaataca
tggacacagggagaggaaaaacacacactggggcctgcaggaacatcacaagaaagggaa
ttagagaagttgtaccccaaggggcacaatgctgatcgttgtgtaggagatgactgtgtc
aatgaagagagtccacctcagagaaggacatttccccttctgcagtatttctccaacttg
gctgcagttggaggcgatgccccaggggacactctcaaggtctgggtgcagtggataatc
agaagccagtgcagggcccgcccataccctccgaagagacccaccctcctgcccagggcg
tatcggatgtgggggagaagaggccttctcaggctcacccccacgctggagctaagggga
accagaggagactctggtccttggaacttggactcgaaaggagtgagagctcagtgtaga
caggaccagtttgaaatggttgatgacaacaggagactgaggtcaggagttgcagcagag
caagaaccaggtggggaatctatggctcaggaaggagaagaggggagtccagtggcttct
gaggcaaaggggcctaaggcagccactgaaaccaggagtgtggattcaggaggacaatgc
agggagcaatggctctggggacttctgataccctttgtgcttagcttgaatggacacccc
caactgctgcttgcagaggaccatagtcccattgttcatggagaaccatcagcatctaga
agtattcacagtgggttctatattgactaccttggacattgtgggatcctgaattgtact
ccatgtaggagactgctggtgtcttcctaa

>gi568815594r:152222884_152452730|GENSCAN_predicted_peptide_6|228_aa
MAPQLASCVHAQLQLCLIGAVTCIEDSKLLHVGDCESLTQSDLLSEGCEFESKKKRNIRK
KPKQRSTSSSGIDGGRLNPGCDQGAPPDPPWNMESCRPSLAAGLLPPSLGERPLGASPPI
LRAGELVFEMKDHSDQHRRVNVQILVQQVWNRTQEPAFPSSSLVRVLLPQDTLSMCNVYL
REKCTENQGSAGSGEAALDPHFTLGKRKAKRSFVASNQFREMEEFTTD

>gi568815594r:152222884_152452730|GENSCAN_predicted_CDS_6|687_bp
atggcccctcagctggctagctgtgttcatgcacagcttcagctctgcctgatcggagca
gtgacctgtattgaggactccaagttgctccatgttggagattgtgaatcactgacccaa
tcagacctactctcggagggctgtgaatttgagagtaagaaaaagagaaacattaggaaa
aaaccgaaacagagaagcacaagcagtagtggcatagacggaggaaggctgaatcctggg
tgtgaccagggggcaccaccagatcccccttggaacatggagtcatgtagaccgagcctg
gcagcgggactgctccctccttctttgggagagaggcccctgggagcatccccacctatc
ctccgggcaggggaattggtatttgagatgaaggaccattcagatcagcaccggagggtg
aatgtacagattctggttcagcaggtctggaacaggacccaagagcctgcatttccaagc
agctctctggtgagggtgctgctgccgcaggacactctgagtatgtgcaacgtgtatctc
agggagaagtgtacagaaaaccagggctcagctgggtctggggaagctgcccttgatccc
catttcactttagggaagagaaaagcaaagaggtcttttgtagcctctaatcaattcagg
gaaatggaagagtttacaacagactag

>gi568815594r:152222884_152452730|GENSCAN_predicted_peptide_7|965_aa
MEMQIKTTMPYYFPSTRIAKIKRSQSPLNVGENRKQLKLSYMAGGSVKCPRTVEIHSIVV
KDKPFLAPVLAEGPLHLSVIRVGKRPTRFHLLGGRLFGGIPLLQNVKTFASSDSLAKVQE
VASWLLEMNQELLSVGSKRRRTGGSLRGNPSSSQVDEEQMNRVVEEEQQQQLRQQEEEHT
ARNGEVVGVEPRPGGQNDSQQGQLEENNNRFISVDEDSSGNQEEQEEDEEHAGEQDEEDE
EEEEMDQESDDFDQSDDSSREDEHTHTNSVTNSSSIVDLPVHQLSSPFYTKTTKPLIATD
PFTVSIVLLFPECHIVGIIHFWLLKSDANEEWKYEEGTGEFEEEYSSTKRSFKMSKPGKP
TLNHGLVPVDLKSAKEPLPHQTVMKIFSISIIAQGLPFCRRRMKRKLDHGSEVRSFSLGK
KPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRITSVQPPTGLQEWLKMFQNSV
ILAVLDRHLGTTGLDQASHCSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFIS
LLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVI
KPGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNT
LKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTS
TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM
VKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS
LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD
DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF
DVDMK

>gi568815594r:152222884_152452730|GENSCAN_predicted_CDS_7|2898_bp
atggagatgcagattaaaaccacaatgccatactactttccatccacaagaatagctaaa
attaaaagaagtcagtcaccactgaatgttggtgaaaataggaagcagctgaaactctct
tacatggctggtggaagtgtaaaatgtcccaggacagtggaaatacacagtattgtggtc
aaagataaaccattcttggctccagtcctggctgagggcccactacacttgtctgttatc
cgagtgggcaaacgacctacccgttttcatctgctgggcggccggttatttggggggatc
cccctgttacagaatgtgaaaacctttgcatcttctgatagtctagccaaggtccaagaa
gtagcaagctggcttttggaaatgaatcaggaactgctctctgtgggcagcaaaagacga
cgaactggaggctctctgagaggtaacccttcctcaagccaggtagatgaagaacagatg
aatcgtgtggtagaggaggaacagcaacagcaactcagacaacaagaggaggagcacact
gcaaggaatggtgaagttgttggagtagaacctagacctggaggccaaaatgattcccag
caaggacagttggaagaaaacaataatagatttatttcggtagatgaggactcctcagga
aaccaagaagaacaagaggaagatgaagaacatgctggtgaacaagatgaggaggatgag
gaggaggaggagatggaccaggagagtgacgattttgatcagtctgatgatagtagcaga
gaagatgaacatacacatactaacagtgtcacgaactccagtagtattgtggacctgccc
gttcaccaactctcctccccattctatacaaaaacaacaaaacctctcatcgccactgat
cctttcaccgtctccatagttttgctttttccagaatgtcatatagttggaattatacat
ttttggttattgaaatcagatgcaaatgaggaatggaagtatgaagaaggtactggtgaa
tttgaggaagagtattcgtcaaccaagaggagttttaaaatgtcaaaaccgggaaaacct
actctaaaccatggcttggttcctgttgatcttaaaagtgcaaaagagcctctaccacat
caaactgtgatgaagatatttagcattagcatcattgcccaaggcctccctttttgtcga
agacggatgaaaagaaagttggaccatggttctgaggtccgctctttttctttgggaaag
aaaccatgcaaagtctcagaatatacaagtaccactgggcttgtaccatgttcagcaaca
ccaacaacttttggggacctcagagcagccaatggccaagggcaacaacgacgccgaatt
acatctgtccagccacctacaggcctccaggaatggctaaaaatgtttcagaactcagta
attcttgctgtccttgatcggcatttgggaaccactggcctggaccaagcctctcactgt
agctggagtggaccagagaaattgcttgctttagatgaactcattgatagttgtgaacca
acacaagtaaaacatatgatgcaagtgatagaaccccagtttcaacgagacttcatttca
ttgctccctaaagagttggcactctatgtgctttcattcctggaacccaaagacctgcta
caagcagctcagacatgtcgctactggagaattttggctgaagacaaccttctctggaga
gagaaatgcaaagaagaggggattgatgaaccattgcacatcaagagaagaaaagtaata
aaaccaggtttcatacacagtccatggaaaagtgcatacatcagacagcacagaattgat
actaactggaggcgaggagaactcaaatctcctaaggtgctgaaaggacatgatgatcat
gtgatcacatgcttacagttttgtggtaaccgaatagttagtggttctgatgacaacact
ttaaaagtttggtcagcagtcacaggcaaatgtctgagaacattagtgggacatacaggt
ggagtatggtcatcacaaatgagagacaacatcatcattagtggatctacagatcggaca
ctcaaagtgtggaatgcagagactggagaatgtatacacaccttatatgggcatacttcc
actgtgcgttgtatgcatcttcatgaaaaaagagttgttagcggttctcgagatgccact
cttagggtttgggatattgagacaggccagtgtttacatgttttgatgggtcatgttgca
gcagtccgctgtgttcaatatgatggcaggagggttgttagtggagcatatgattttatg
gtaaaggtgtgggatccagagactgaaacctgtctacacacgttgcaggggcatactaat
agagtctattcattacagtttgatggtatccatgtggtgagtggatctcttgatacatca
atccgtgtttgggatgtggagacagggaattgcattcacacgttaacagggcaccagtcg
ttaacaagtggaatggaactcaaagacaatattcttgtctctgggaatgcagattctaca
gttaaaatctgggatatcaaaacaggacagtgtttacaaacattgcaaggtcccaacaag
catcagagtgctgtgacctgtttacagttcaacaagaactttgtaattaccagctcagat
gatggaactgtaaaactatgggacttgaaaacgggtgaatttattcgaaacctagtcaca
ttggagagtggggggagtgggggagttgtgtggcggatcagagcctcaaacacaaagctg
gtgtgtgcagttgggagtcggaatgggactgaagaaaccaagctgctggtgctggacttt
gatgtggacatgaagtga