GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:10:07

Sequence gi568815575r:134672142_134896205 : 224064 bp : 41.19% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  19216  19291   76  0  1   54   86    43 0.319   2.00
 1.02 Intr +  20240  20293   54  0  0  102   95    13 0.615   1.43
 1.03 Intr +  23227  23430  204  2  0   43   75    92 0.382   1.65
 1.04 Intr +  27223  27323  101  2  2   92   37    86 0.264   2.81
 1.05 Term +  35967  36167  201  2  0  -12   36   220 0.466   3.21
 1.06 PlyA +  36898  36903    6                               1.05

 2.03 PlyA -  38388  38383    6                               1.05
 2.02 Term -  41843  41680  164  0  2  105   42   252 0.980  19.42
 2.01 Init -  54869  54806   64  2  1   78   92    36 0.576   4.36
 2.00 Prom -  56739  56700   40                              -5.35

 3.00 Prom +  59117  59156   40                              -4.45
 3.01 Init +  61461  61590  130  2  1   82   59    70 0.083   3.86
 3.02 Intr +  64447  64820  374  2  2   43  100   238 0.174  14.36
 3.03 Intr +  65519  65633  115  1  1   47   75    70 0.600   0.70
 3.04 Intr +  69757  70001  245  2  2   -5   92   151 0.111   2.49
 3.05 Term +  79062  79310  249  2  0   17   39   199 0.278   2.62
 3.06 PlyA +  79390  79395    6                               1.05

 4.10 PlyA -  81942  81937    6                               1.05
 4.09 Term - 100142  99998  145  1  1   92   38   133 0.113   5.10
 4.08 Intr - 109776 109680   97  1  1   93   53   109 0.184   6.05
 4.07 Intr - 111025 110988   38  0  2   83  100   -12 0.383  -3.51
 4.06 Intr - 115392 115331   62  0  2   84  121    67 0.951   6.21
 4.05 Intr - 116690 116589  102  2  0   50   97    70 0.901   3.55
 4.04 Intr - 116998 116944   55  0  1  107   63    60 0.894   3.46
 4.03 Intr - 117125 117082   44  2  2  105   96    28 0.719   1.42
 4.02 Intr - 121752 121674   79  2  1   90  119   -29 0.158  -0.97
 4.01 Init - 124064 123967   98  2  2   77   99    57 0.128   5.53
 4.00 Prom - 131965 131926   40                              -0.45

 5.00 Prom + 132891 132930   40                              -5.95
 5.01 Init + 135458 135567  110  1  2   88   80    98 0.843   8.74
 5.02 Term + 145650 145998  349  0  1   55   33   276 0.931  11.77
 5.03 PlyA + 146662 146667    6                               1.05

 6.00 Prom + 148944 148983   40                              -7.55
 6.01 Init + 168371 168445   75  1  0   35   66   105 0.478   4.14
 6.02 Intr + 173064 173107   44  2  2  105  101    32 0.407   2.32
 6.03 Term + 181950 182076  127  0  1   85   39   147 0.955   6.27
 6.04 PlyA + 185743 185748    6                               1.05

 7.03 PlyA - 187199 187194    6                               1.05
 7.02 Term - 198652 198507  146  2  2  116   48   136 0.949   9.49
 7.01 Intr - 219499 219338  162  2  0   46   82    91 0.125   3.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:134672142_134896205|GENSCAN_predicted_peptide_1|211_aa
MEQMRSNDFRAGQEFKPGVLWASFMGLHLGHLLLDSPPFPAFPETKTKITRKLSSIETLQ
IQAVSGTKGCGNGGSDCGAYKTKTRNSNFQRTHYLHFLSVSTDCFPDDTDAEDAAIRHHL
GSGKKAFTDTKPASALILDFPVSRTKQPKRPSTSERVRPTMVHPYQERRELPAQNSTPSK
NILQNEGEIKTSSDEGKLTEFVTSRLGNRKE

>gi568815575r:134672142_134896205|GENSCAN_predicted_CDS_1|636_bp
atggaacaaatgaggagcaatgacttccgagcagggcaggaattcaagccaggtgtgctc
tgggcaagcttcatggggctgcatttggggcatctccttctggacagtcctccatttcct
gcatttcctgaaacaaaaactaaaataaccagaaagctctctagcattgagaccctccag
atacaagctgttagtggaactaaaggctgtggaaatggaggaagtgattgtggtgcctac
aagacaaagaccaggaactcaaactttcaaaggacccattaccttcactttctgtctgta
tctacagactgctttccagatgatactgatgcagaggatgcagcaataaggcaccatctt
ggaagtggaaaaaaggccttcacagacaccaagcctgccagtgccttgatcttggacttc
ccagtctccagaactaaacaaccaaaacgtccctcaacaagtgaacgggttcgaccaact
atggtacatccataccaggaaagaagagaactgccagcacagaattctacacccagcaaa
aatattcttcaaaatgaaggggaaatcaagacatcctcagatgaaggaaaactaacagaa
ttcgtcactagcagactcggcaatagaaaggagtaa

>gi568815575r:134672142_134896205|GENSCAN_predicted_peptide_2|75_aa
MGRVSPALDGGKEEGEKGGKGGYKGPLKAALLIRFQLPDFPGEEVVEVGLPVPTSLADPP
LHGTIRTLYTWTLAV

>gi568815575r:134672142_134896205|GENSCAN_predicted_CDS_2|228_bp
atgggcagagtgtctccagcactggatgggggtaaagaggagggagagaaagggggaaag
ggaggctacaaggggcccctcaaggctgcccttctcattcggttccagctgcctgatttc
cctggagaggaggttgtggaggtggggctgccagtccctacatccctagcagacccacct
cttcacgggaccatccggaccctgtacacgtggaccctggccgtgtag

>gi568815575r:134672142_134896205|GENSCAN_predicted_peptide_3|370_aa
MGASGIARAVSSENWSCERTKALDPQRARGFQMEQKLKGKSEQAGTNSPGSAILQMSTSC
PPKILGNRSFAMLITEKALAPFNPFVSLQPLTKHLLSGRHSCRLLKAMAPDLWEAPLKEV
KVRSIPKGIVFDSRSKWTPGHHKIDHEKSMPLFSELACIFPYVALQKPRCAPLPFLLTLH
GQLERRSGSSNHAEVDEKASLAYGKSELWTQEESQVQMEVAVESRPKFPQQELLRNKAGR
VGISNSHRCRGWVGDGQWGRAFFHPHAVSSHVWLSKAGHCCLNPGIEYPHFKYSTATWCW
RLLNGTVQMYVIPIIVESSSGQHCSPGTSDLFPIPLALQSHADNCITINNNNNINNCSTS
DPPTLPATSL

>gi568815575r:134672142_134896205|GENSCAN_predicted_CDS_3|1113_bp
atgggggcctcaggaatagctagggctgtttcctcagagaactggtcatgtgaaaggaca
aaggctttggatcctcaaagggcaagaggattccagatggagcaaaagcttaaaggcaaa
tctgagcaggctggtacaaacagccctggcagtgcaatactccaaatgagtacatcttgt
cctcccaagatccttggaaatcgaagctttgctatgctcattactgagaaggctctggcg
cccttcaacccatttgtatctcttcaacctctcactaaacatttgttgtctggccggcac
agctgcaggctcctaaaagccatggccccagacctctgggaagctcccctgaaagaggtc
aaggtgaggagtatcccgaagggcattgtgtttgattctagaagcaagtggacaccagga
caccacaagattgatcacgagaaatccatgcctctgttttcagaacttgcttgcatcttt
ccctatgtggcactccagaagccaaggtgtgctccattacccttccttctgacattgcat
gggcagttggaaaggagatctggaagctctaaccatgctgaggtcgacgaaaaagctagt
ttggcttatgggaagtcagaactgtggactcaagaagaaagccaagtgcagatggaagtg
gctgtggagagcaggcctaaattccctcagcaggaattactgaggaacaaagctggcaga
gtggggatttcaaacagtcacaggtgcaggggctgggtgggggatgggcagtggggaaga
gcctttttccaccctcatgcagtcagttctcatgtatggctgtctaaagcaggccactgc
tgtctaaatccaggtattgaatatccacatttcaagtactcaacagccacgtggtgctgg
cggctcctgaatgggacggtgcaaatgtatgtaattcccatcatcgtggaaagttctagt
ggacagcactgctcaccagggacctctgatttatttcctatcccattggctcttcaatct
catgcagacaactgcatcaccatcaacaacaacaacaacatcaacaactgctctacaagt
gaccctcctacccttccagctaccagtctctag

>gi568815575r:134672142_134896205|GENSCAN_predicted_peptide_4|239_aa
MAQEKMELDLEPDTSYGGTLRRSSSAPLIHGLSDLSQVFQPYTLRTRRNSTTIMSRHSLE
EGLDMVNRETAHEREMQTAMQISQSWDESLSLSDSDFDKPEKLYSPKRIDFTPVSPAPSP
TRGFGKMFVSSSGLPPSPVPSPRRFSRELFVVLGMFSVASEMETESQPKRLFQGTTNMLS
PDAAQLSDLSSCSDILDGSSSSSGLSSDPLAKGSATAESPVACSNSCSSFILMDDLSPK

>gi568815575r:134672142_134896205|GENSCAN_predicted_CDS_4|720_bp
atggctcaggagaaaatggagctggaccttgagcctgacacatcttatgggggaaccctg
aggagatccagcagcgctcccctaatccatgggctcagtgacctttcacaggttttccaa
ccttacacacttagaactcggaggaatagtacaacaattatgagccgtcacagcctggaa
gaaggcctggatatggtgaacagagaaactgcacatgaaagggaaatgcaaacggcaatg
cagataagccaatcatgggatgagagcttgagcctgagtgacagtgattttgacaagccg
gagaaattatattctcctaagagaattgacttcactccagtttctccagcaccttcaccc
accaggggattcggaaagatgttcgtgagcagcagtggattgccaccaagtccagttccc
agtccaagacgattttcaagggagttatttgtagtcctaggaatgttctcagtagccagt
gaaatggagacagaaagtcagcccaagagactcttccaaggcactaccaatatgttatct
ccagatgccgcgcaactgtctgatctcagttcatgttcagatattttggatggcagtagt
agcagcagtggcttatcctcagacccgctggctaaaggcagcgctaccgcagagtctcca
gtagcatgctccaattcatgctcttcgttcatcttgatggatgatctctcacccaagtga

>gi568815575r:134672142_134896205|GENSCAN_predicted_peptide_5|152_aa
MAQEKMKLGFKSLPSSTTADGNILRRVNSAPLINGLGVSEKPLKSFEPMIDMIRFVKRLP
WLQSGKWIGRGQTYMQEDQIGYCNHPGKELMVAWTSVMVVEIEKSSRFRRNFKDGINGRW
ETVEANLTPRSLAWAADGMVVTQNKKGPLQEE

>gi568815575r:134672142_134896205|GENSCAN_predicted_CDS_5|459_bp
atggcacaggagaaaatgaaactaggtttcaagtcgctgccgagttccactaccgcagac
ggcaacattctgagaagagtcaacagtgcccctttgatcaatggacttggggtcagtgag
aagccattgaagagttttgagccaatgattgacatgatcagatttgttaaaagattgccc
tggctgcagagtggaaagtggattggaagagggcaaacgtatatgcaagaagatcagata
ggctactgcaatcaccctggcaaagagctgatggtagcttggactagtgtgatggtagtg
gaaatagagaaaagttccagattcaggagaaatttcaaagatggaatcaatggacggtgg
gaaacagtggaggcaaacctgactcctaggtctctagcttgggcagctgatgggatggta
gtgacacagaataagaagggaccattgcaagaagagtag

>gi568815575r:134672142_134896205|GENSCAN_predicted_peptide_6|81_aa
MRTVQPPHHPHSYRHLHMDEETDAQEEAMDLINRETMSECLLPATFDGNDSNAGSSGNSS
AEIGTVTNSPVSPSDTGSHLF

>gi568815575r:134672142_134896205|GENSCAN_predicted_CDS_6|246_bp
atgagaactgtacagccacctcatcatcctcattcttatcgtcatcttcatatggatgaa
gaaactgacgctcaggaagaagccatggatttaataaatagagaaacaatgtctgaatgt
ctacttccagctacttttgatggaaacgacagcaatgctggatcttctggtaattcgtca
gctgaaatcggcactgtcacaaactctcctgtgtcaccttctgatactggttctcatttg
ttctag

>gi568815575r:134672142_134896205|GENSCAN_predicted_peptide_7|102_aa
XNRAVSSGPSLLTVFLGVVCIAALMLPTLGDVESLVPLYLHLSVNQKLVAAYILETISIL
LPSSPLSKSAPPSAILALLALISRTHSPRDLRQHLLCQSLAL

>gi568815575r:134672142_134896205|GENSCAN_predicted_CDS_7|309_bp
naaaacagagctgtatcctcaggacctagtttactaactgtcttcctgggagtggtgtgc
attgcagccctgatgctgcctacactgggggatgtggaatcgctggtgcctctctacctc
cacttaagtgtgaatcaaaaattagtggctgcttatatcttagagaccatcagcatcctc
ctgccttcctctcctctttccaagtcagccccaccatcggccattttagctctgctagcg
ttgatctcccggactcactctccccgtgaccttcggcagcacctgctctgccaatccctg
gccctgtga