GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:55:30

Sequence gi568815597f:236383165_236584328 : 201164 bp : 44.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12466  12496   31  0  1  118  103    40 0.844   8.26
 1.02 Intr +  22803  22994  192  1  0   83   80    29 0.032   1.06
 1.03 Intr +  44228  44286   59  0  2  110  110    39 0.055   6.90
 1.04 Intr +  68583  68788  206  2  2   76  110    30 0.010   2.00
 1.05 Intr +  85067  85112   46  2  1   91   99    53 0.085   5.11
 1.06 Intr +  86438  86483   46  1  1   66   91    35 0.084  -0.42
 1.07 Term +  99103  99485  383  2  2   93   43   313 0.977  22.30
 1.08 PlyA +  99705  99710    6                              -1.75

 2.00 Prom +  99813  99852   40                              -6.86
 2.01 Init + 100001 101094 1094  1  2   72   62  1309 0.007 120.59
 2.02 Intr + 108919 108991   73  1  1   83  100    78 0.318   7.91
 2.03 Intr + 154333 154421   89  0  2   83   98    57 0.633   4.97
 2.04 Intr + 155715 155925  211  0  1   76   96   169 0.699  15.42
 2.05 Intr + 157400 157519  120  1  0  122  109   116 0.999  17.79
 2.06 Intr + 159751 159876  126  0  0   67   42    75 0.696   1.68
 2.07 Term + 160396 160551  156  0  0   75   47   136 0.616   6.13
 2.08 PlyA + 165623 165628    6                               1.05

 3.28 PlyA - 166689 166684    6                               1.05
 3.27 Term - 167826 167738   89  1  2  130   47    74 0.993   5.32
 3.26 Intr - 168943 168835  109  1  1  108   86    24 0.993   4.06
 3.25 Intr - 170575 170417  159  1  0   85   72   134 0.997  11.68
 3.24 Intr - 171588 171434  155  1  2   89   91    -9 0.912  -0.71
 3.23 Intr - 172300 172132  169  1  1   47   94   158 0.912  11.82
 3.22 Intr - 172491 172387  105  0  0  104   61    68 0.968   6.11
 3.21 Intr - 172775 172641  135  2  0   46   99    85 0.986   6.16
 3.20 Intr - 173094 172936  159  0  0  104   72    83 0.960   8.48
 3.19 Intr - 174181 174031  151  0  1   70   99   188 0.960  18.26
 3.18 Intr - 175365 175073  293  0  2  105   85   236 0.994  20.93
 3.17 Intr - 175971 175831  141  0  0   75   73   105 0.996   8.25
 3.16 Intr - 176673 176550  124  2  1   82  100   157 0.999  16.89
 3.15 Intr - 177281 177223   59  2  2  110   62    19 0.443  -0.82
 3.14 Intr - 181497 181334  164  1  2   85   90     9 0.818   0.49
 3.13 Intr - 182881 182755  127  1  1   88  121    16 0.970   5.15
 3.12 Intr - 183712 183482  231  1  0   96   77   193 0.999  16.97
 3.11 Intr - 185960 185832  129  2  0   95  110    46 0.997   8.39
 3.10 Intr - 188308 188187  122  2  2   73  119   144 0.996  16.21
 3.09 Intr - 188522 188404  119  1  2   36  100    84 0.989   4.51
 3.08 Intr - 189390 189247  144  2  0   89   90    40 0.926   3.70
 3.07 Intr - 189664 189561  104  1  2   73   63    98 0.997   4.77
 3.06 Intr - 191169 191038  132  0  0  109   86    27 0.976   5.44
 3.05 Intr - 191739 191497  243  0  0   32   86    90 0.429   0.89
 3.04 Intr - 193785 193616  170  1  2   78  115    25 0.847   3.87
 3.03 Intr - 198250 198058  193  1  1   78   67    39 0.880  -0.13
 3.02 Intr - 199708 199572  137  2  2   88   82    67 0.963   6.39
 3.01 Intr - 200032 199849  184  1  1   72  116    22 0.680   2.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  50894  50810   85  1  1   57   38   168 0.933   5.83
S.002 Sngl + 100001 101167 1167  1  0   72   43  1350 0.933 125.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:236383165_236584328|GENSCAN_predicted_peptide_1|320_aa
MASPDDPLRAGSRINLSWTQRALFAEDGVRAFKAPSLTPPLAPHSKPIYLKFHCVDAINK
PHSWQDGIFKPYPPAEECDTITLNCPRNSDMKNQLRPDLKFGGLKVRRLDLALSLLPGDE
NLATAQLPDMGSALPAEFLHLPPAANPSSFSPRNTPCTSYLSREKKMAFQIALEILFQGG
EPVEPSGAAIISPEISKDNSCKENCTCSSCLLRAPTISDLLNDQDLLDVIRIKLDPCHPT
VKNWRNFASKWGMSYDELCFLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHRADVEKVL
RRWVDEEWPKRERGDPSRHF

>gi568815597f:236383165_236584328|GENSCAN_predicted_CDS_1|963_bp
atggcttcaccggacgaccctctgcgcgcaggaagcaggattaacttgtcctggacgcag
cgggcattgtttgcagaggatggtgtcagagcatttaaagcccccagcctcaccccaccc
ctggctccacactccaaacccatttacctgaaatttcactgtgttgatgctattaacaag
ccacactcctggcaggatggcatttttaagccgtatcctccagctgaagaatgtgataca
attactttgaactgcccacgaaattcagatatgaaaaatcagctcaggcctgatctgaaa
tttggaggccttaaagttaggcggttggacctggctctctccctcctccccggagatgag
aatttggccactgcacaattacctgatatgggcagtgcacttccagctgaatttttacac
ctccccccagcagccaaccccagctccttctctcccaggaatacaccttgcacctcttac
ctgagcagggagaagaaaatggctttccagatagcactggagatcctcttccagggtggg
gaacccgtagagccctcaggggcagctatcatcagcccagagatcagcaaggacaactcc
tgcaaagaaaactgtacttgttcctcctgcttgctccgggcccccaccataagtgacttg
ctcaatgatcaggacttactagacgtgatcaggataaagctggatccgtgtcacccaacg
gtgaaaaactggaggaattttgcaagcaaatgggggatgtcctatgacgaattgtgcttc
ctggagcagaggccacagagccccaccttggagttcttgctccggaacagtcagaggacg
gtgggccagctgatggagctctgcaggctctaccacagggccgacgtggagaaggttctg
cgcaggtgggtggacgaggagtggcccaagcgggagcgtggagacccctccaggcacttc
tag

>gi568815597f:236383165_236584328|GENSCAN_predicted_peptide_2|622_aa
MSILKIHARELFDSRGNPTVEVDLFTSEGLFRAAVPSGASTGIYEVLELQDNDKTRYMGK
GVSKPVEPINKTIAPVLVSKKLNVTEQEKIDKLMIEMDGTENKSKFGANAILGVSLAACK
ASAVEKGVPLYHHIADLSGNSKVILPVPVFNVINGSSHAVTKLAMQEFMVLPVGAANFRE
AMPIGAEVYHSLKNVIKEKYGKDATGVGDGGAFAPNILENKEGLELLKTAIGKAGYTDKV
IVSMDVEASEFFRSGKYDLEFKFLDDPTRYISPDCLADLYKSFIKNYPVVSTEDPFDQDD
WGAWQKFTASAGIQVVEDDLRVTNPKRTASAVNEKKCNCLLLKVNQIRSVTESLQACKLA
QANGCPVTPESSPEAGPRSFMEDVPQLTKVIPFVGTIPDQLDPGTLIVIRGHVPSDADRF
QVDLQNGSSMKPRADVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIV
IMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSPSNRGGDISKI
APRTVYTKSKDSTVNHTLTCTKIPPMNYVSKRLPFAARLNTPMGPGRTVVVKGEVNANAK
RSVSFGTSHSADTSVPVTAFHP

>gi568815597f:236383165_236584328|GENSCAN_predicted_CDS_2|1869_bp
atgtctattctcaagatccatgccagggagctctttgactctcgtgggaatcccactgtt
gaggttgatctcttcacctcagaaggtctcttcagagctgctgtgcccagtggtgcttca
actggtatctatgaggtcctagagctccaggacaatgataagactcgctatatggggaag
ggtgtctcaaagcctgttgagcccatcaataaaactattgcacctgtcctggttagcaag
aaactgaacgtcacagaacaagagaagattgacaaacttatgatagagatggatggaaca
gaaaataaatctaaatttggtgcaaatgccattctgggagtgtccctcgctgcctgcaaa
gctagtgctgttgagaagggggttcccctgtaccaccacatcgccgacttgtctggcaac
tccaaagtcatcttgccagtcccggtgttcaatgtcatcaatggcagttctcatgctgtc
accaagctggccatgcaggagttcatggtcctcccagtcggtgcagcaaacttcagggaa
gccatgcccattggagcggaggtttaccacagcctgaagaatgtcatcaaggagaaatat
gggaaagatgccaccggtgtgggggatggaggcgcgtttgctcccaacatcctggagaat
aaagaaggcctggagctgctgaagactgcgattgggaaagctggctacactgataaggtg
atcgtcagcatggacgtagaggcctccgagttcttcaggtctggaaagtatgacctggaa
ttcaagtttctcgacgaccccaccaggtacatctcacctgactgtctggctgacctgtac
aagtccttcatcaaaaactacccagtggtgtctactgaagatccctttgaccaggatgac
tggggagcttggcagaagttcacggccagtgcaggaatccaggtagtggaggatgatctc
agagtgaccaacccaaagaggacagcctcggccgtgaatgagaagaagtgcaactgcctc
ctgctcaaagtgaaccagattcgctctgtgactgagtcccttcaggcgtgcaagctggcc
caggccaatggttgcccagtgacccctgaatcttcccctgaggcaggtccccgaagcttc
atggaggatgttcctcagctgaccaaggtaatcccgtttgttggcaccattcctgatcag
ctggatcctggaactttgattgtgatacgtgggcatgttcctagtgacgcagacagattc
caggtggatctgcagaatggcagcagcatgaaacctcgagccgatgtggcctttcatttc
aatcctcgtttcaaaagggccggctgcattgtttgcaatactttgataaatgaaaaatgg
ggacgggaagagatcacctatgacacgcctttcaaaagagaaaagtcttttgagatcgtg
attatggtgctgaaggacaaattccaggtggctgtaaatggaaaacatactctgctctat
ggccacaggatcggcccagagaaaatagacactctgggcatttatggcaaagtgaatatt
cactcaattggttttagcttcagctcgcctagtaatagaggaggagacatttctaaaatc
gcacccagaactgtctacaccaagagcaaagattcgactgtcaatcacactttgacttgc
accaaaataccacctatgaactatgtgtcaaagaggctgccattcgctgcaaggttgaac
acccccatgggccctggacgaactgtcgtcgttaaaggagaagtgaatgcaaatgccaaa
aggtcagtatccttcggtaccagtcacagtgcagatacttccgtgcctgttaccgccttc
cacccgtga

>gi568815597f:236383165_236584328|GENSCAN_predicted_peptide_3|1348_aa
EIPSEWHIELMLDRGIPVELWAHYVEELNSTQRVAVEDSVFLVFSLKKFIYALKAPKSFP
KGDIWWNPEQLKEDSRDYLHLLIGLFEMMLNGADAVHFRVLMKLFIKVHLEDVFQLFKFC
SVLWTYGSSLSNPLNCSVKTVLQTQALYVGCAMLSSQKTQCKHQLASISSPVVTSLLINL
GSPVKEVRRAAIQCLQALSGVASPFYLIIDHLISKAEEITSDAAYVIQMVLSQLLPMAEQ
LLEKIQKEPTAVLKDEAMVLHLTLGKYNEFSVSLLNEDPKSLDIFIKAVHTTKELYAGMP
TIQITALEKITKPFFAAISDEKVQQKLLRMLFDLLVNCKNSHCAQTVSSVFKGISVNAEQ
VRIELEPPDKAKPLGTVQQKRRQKMQQKKSQDLESVQEVGGSYWQRVTLILELLQHKKKL
RSPQILVPTLFNLLSRCLEPLPQEQGNMEYTKQLILSCLLNICQKLSPDGGKIPKDILDE
EKFNVELIVQCIRLSEMPQTHHHALLLLGTVAGIFPDKVLHNIMSIFTFMGANVMRLDDT
YSFQVINKTVKMVIPALIQSDSGDSIEVSRNVEEIVVKIISVFVDALPHVPEHRRLPILV
QLVDTLGAEKFLWILLILLFEQYVTKTVLAAAYGEKDAILEADTEFWFSVCCEFSVQHQI
QSLMNILQYLLKLPEEKEETIPKAVSFNKSESQEEMLQVFNVETHTSKQLRHFKFLSVSF
MSQLLSSNNFLKKLPPQAGSSGGISSGSCVGIWLLETVLGYISAVAQSMERNADKLTVKF
WRALLSKAYDLLDKVNALLPTETFIPVIRGLVGNPLPSVRRKALDLLNNKLQQNISWKKT
IVTRFLKLVPDLLAIVQRKKKEGEEEQAINRQTALYTLKLLCKNFGAENPDPFVPVLNTA
VKLIAPERKEEKNVLGSALLCIAEVTSTLEALAIPQLPSLMPSLLTTMKNTSELVSSEVY
LLSALAALQKVVETLPHFISPYLEGILSQVIHLEKITSEMGSASQANIRLTSLKKTLATT
LAPRVLLPAIKKTYKQIEKNWKNHMGPFMSILQEHIGVMKKEELTSHQSQLTAFFLEALD
FRAQHSENDLEEVGKTENCIIDCLVAMVVKLSEVTFRPLFFKLFDWAKTEDAPKDRLLTF
YNLADCIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFDSENDPEKCCLLLQFIL
NCLYKIFLFDTQHFISKERAEALMMPLVDQLENRLGGEEKFQERVTKHLIPCIAQFSVAM
ADDSLWKPLNYQILLKTRDSSPKVRFAALITVLALAEKLKENYIVLLPESIPFLAELMED
ECEEVEHQCQKTIQQLETVLGEPLQSYF

>gi568815597f:236383165_236584328|GENSCAN_predicted_CDS_3|4047_bp
gaaatcccctcagaatggcacattgaactgatgttagacagagggatcccagtggagctg
tgggcacattatgtagaagagctcaacagcactcagagggtggccgtggaggactcggtt
tttcttgtattttccttgaaaaaatttatttatgcactgaaagctcctaaatcttttcct
aaaggtgatatatggtggaatcctgaacaactgaaagaagacagcagggactatctgcac
ttgctcattgggctgtttgagatgatgctcaatggtgccgatgctgttcatttcagagtt
ctgatgaaacttttcataaaggtgcatctagaagatgtttttcagttattcaagttctgt
tctgttttatggacctatggttctagcctttcaaatccactaaactgcagtgtgaaaaca
gtgctgcagactcaagctctttatgtgggctgtgcaatgctttcttctcagaagacacag
tgtaaacaccaactggcatccatatcttctccagtggtgacatctttactcattaacctg
ggaagccccgtaaaagaagttcgtagggctgccattcagtgtctccaggccctcagtgga
gtggcatccccgttttatctgataatagatcatttgatttctaaagcagaggagatcact
tcagatgctgcctatgttattcagatggtgctttctcagctattgcctatggctgaacaa
ctgctagaaaagatccagaaggagcccacagctgtgctgaaagatgaggccatggttctg
catctcactctgggaaagtataatgaattttcagtttcccttttaaatgaggatccgaag
agtctagatatatttataaaagctgtgcacacaacaaaggaactttacgcgggaatgcca
accattcagatcacagcccttgaaaagattacaaaaccattttttgcagccatatcagat
gaaaaagttcagcagaagcttttaagaatgttgtttgatttattggtgaactgtaaaaac
tcacattgtgctcagactgtcagcagtgtttttaaagggatttccgttaatgctgaacaa
gtccgaatagaactggagccaccagataaagctaaacccttgggcacagttcagcaaaaa
agaaggcaaaaaatgcagcagaaaaaatcacaagatctagaatctgttcaggaagttgga
ggttcttactggcaaagagtaactctcatcctggaattactgcagcacaaaaagaagctc
agaagtcctcagatattggtgccaactctttttaacttgctatcaagatgtttagaaccc
ttgccacaagagcagggaaatatggaatacaccaaacaattaattcttagttgtctgctc
aacatctgccaaaaactatctccagatggtggcaaaatacccaaagatattttagatgag
gagaagttcaacgtggagttgatagttcagtgcatccgcctttcggagatgccgcagacc
catcaccatgcccttttacttttgggcactgttgctggaatatttccggataaagtttta
cacaatatcatgtctatttttacatttatgggagccaatgtcatgcgcctagatgatact
tacagttttcaagttattaacaagacagtgaaaatggttattcccgcacttattcagtct
gatagtggagattctatagaagtttcaagaaacgttgaagagattgtggtaaaaatcatt
agtgtatttgtggatgcgctgccacacgtcccggagcacaggcgcctgcccatccttgtt
caacttgttgatacactgggtgcagagaaattcctctggattctcctcatcttgcttttt
gaacagtatgtcacaaaaacagtgctggcggctgcctatggcgaaaaggatgctatttta
gaagcagacactgaattttggttttcagtctgttgtgagtttagtgtccagcatcagata
caaagcttgatgaatatcctccagtacttactaaagctgccagaggaaaaagaagaaacc
attcccaaagcagtgtcatttaataagagtgaatcacaagaagaaatgctacaggttttt
aatgtagagactcacactagcaagcaactgcggcattttaaatttttgtcagtgtccttc
atgtctcagctcctgtcttccaataattttctgaaaaagctcccccctcaggctggcagc
agtggggggatctccagtggcagctgtgttggaatttggttgctggagaccgttctcggc
tatatcagtgcagttgcacagtccatggaaaggaacgcagacaaactcaccgtgaagttc
tggcgcgcgctccttagtaaagcttacgacctgttagataaggtcaatgccttgctgccc
acagagacattcattcctgtgatcagagggctggtgggcaatcccctgccatctgttcgc
cgcaaagcgctggaccttttgaataacaagctgcagcaaaatatatcctggaagaagaca
atagttacccgtttcctaaaactggttccagaccttttggccattgtgcagcgtaagaaa
aaggaaggggaagaagaacaagcaatcaacagacagacagcgttgtataccttaaagctt
ttatgcaagaattttggtgcagaaaatccagatccttttgtcccagtgctgaacactgct
gtgaaactgattgctccagagagaaaggaggagaagaatgtcctgggaagcgcgctgctg
tgcatagcagaggtgacctccaccctggaggcgctggccatcccccagcttcccagcctg
atgccatcgttgctgacaacaatgaagaacaccagcgagctggtctccagcgaggtctac
ctgctcagtgccttggctgctctgcagaaggttgtggagactctcccgcacttcatcagc
ccctatctggaaggcattctctcccaggtgattcatctggagaaaatcactagtgaaatg
ggttctgcgtcacaggctaatatccgtctcacatctcttaaaaagacactggctaccaca
cttgcaccccgagtcctgttgcccgccatcaaaaaaacttacaagcagattgagaagaac
tggaagaatcacatgggtccgtttatgagcatcttgcaagagcatattggggtgatgaag
aaggaagagctcacctcccatcagtctcagctaaccgcctttttcctggaagccctggac
ttccgagcccagcactctgagaacgatctggaggaagttggaaaaacggaaaattgtatc
attgactgtctagtagccatggttgtcaaactttccgaggtcacattcaggcccctgttc
ttcaagctgtttgattgggctaaaacagaagatgccccaaaggacaggttgttgacattt
tacaacttggcagattgcattgctgaaaagctgaaagggctttttactctgtttgccggc
cacttagtgaagccttttgctgacaccttgaaccaggtgaacatctccaaaacagatgaa
gcattttttgactctgaaaatgaccctgaaaagtgctgcttgctgttgcagtttattttg
aactgtttatacaaaatcttcctttttgatacccagcattttataagtaaagagagagca
gaagccttgatgatgcctctggtggatcagctggaaaacaggcttgggggagaagagaaa
ttccaggaacgggtgacaaagcacctgataccatgcatcgcacagttttcggtggccatg
gcggatgactctctttggaaaccactgaactaccagattctgctaaagacgagagactcc
tcgcctaaggttcgatttgctgctttgattactgtgttagcactggctgaaaaactaaag
gagaattatattgtcttgctaccagaatccattcctttcttagcagagttgatggaagat
gaatgtgaagaagtagaacatcagtgccaaaagactattcagcaactggaaactgtcctg
ggagagccactccagagctatttctaa