GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:29:10

Sequence gi568815586r:51229682_51445878 : 216197 bp : 46.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9227   9440  214  1  1   99  -26   213 0.904   9.12
 1.02 Intr +  10662  10780  119  1  2  116   34    39 0.902   1.48
 1.03 Intr +  11190  11435  246  2  0  107   76   141 0.990  12.46
 1.04 Term +  12649  12777  129  0  0   87   55   134 0.906   8.18
 1.05 PlyA +  13090  13095    6                               1.05

 2.20 PlyA -  13901  13896    6                               1.05
 2.19 Term -  16438  16260  179  2  2   46   39   287 0.901  17.45
 2.18 Intr -  17150  17070   81  0  0   76   90    57 0.656   4.31
 2.17 Intr -  23912  23893   20  1  2  110   75    -8 0.004  -3.65
 2.16 Intr -  39635  39564   72  1  0   96   92    38 0.039   3.52
 2.15 Intr -  40284  40062  223  1  1   91    1   125 0.061   1.29
 2.14 Intr -  40498  40378  121  1  1   34   57    59 0.039  -2.53
 2.13 Intr -  55106  55035   72  2  0   97   94    45 0.826   5.60
 2.12 Intr -  58507  58427   81  1  0   94   64    50 0.812   3.03
 2.11 Intr -  62016  61910  107  1  2   47  110    97 0.964   7.73
 2.10 Intr -  62585  62182  404  1  2   42   18   213 0.437   3.77
 2.09 Intr -  66197  66115   83  2  2   54  105    79 0.936   4.64
 2.08 Intr -  67483  67408   76  0  1   68  100    66 0.955   5.32
 2.07 Intr -  69607  69522   86  1  2   53   63   105 0.967   3.12
 2.06 Intr -  70033  69926  108  1  0   29   93   200 0.945  15.08
 2.05 Intr -  72434  72339   96  2  0   69   73    94 0.952   6.21
 2.04 Intr -  73099  73005   95  2  2   88   86   153 0.997  14.78
 2.03 Intr -  73460  73406   55  2  1  108   86    92 0.998   9.55
 2.02 Intr -  84222  84142   81  0  0   76   89    86 0.964   7.33
 2.01 Init -  94508  94341  168  2  0   78  100   160 0.680  13.85
 2.00 Prom -  97025  96986   40                              -5.46

 3.08 PlyA -  98556  98551    6                               1.05
 3.07 Term -  98913  98896   18  0  0  100   47    52 0.716   0.62
 3.06 Intr - 100152 100003  150  0  0   89   82    35 0.671   3.36
 3.05 Intr - 110324 110218  107  0  2   70   66   172 0.747  13.13
 3.04 Intr - 111699 111563  137  2  2  105   89   152 0.999  17.21
 3.03 Intr - 113019 112894  126  2  0   73   57   192 0.999  14.39
 3.02 Intr - 117056 116942  115  0  1   84  115    41 0.778   5.91
 3.01 Init - 122424 122289  136  0  1   45   63   105 0.703   4.18
 3.00 Prom - 123866 123827   40                              -7.66

 4.11 PlyA - 124077 124072    6                              -0.45
 4.10 Term - 124811 124698  114  2  0  133   48    49 0.967   3.97
 4.09 Intr - 126277 126125  153  1  0   91  109   183 0.999  20.97
 4.08 Intr - 127769 127668  102  2  0  106   85   151 0.992  16.97
 4.07 Intr - 128580 128449  132  0  0   11   97   138 0.921   7.84
 4.06 Intr - 129651 129451  201  0  0   87   78   201 0.952  18.48
 4.05 Intr - 131157 131040  118  2  1   98   80   156 0.970  16.27
 4.04 Intr - 134674 134440  235  2  1   91   80   279 0.889  24.15
 4.03 Intr - 135898 135749  150  2  0   72   74   252 0.447  22.33
 4.02 Intr - 147686 147514  173  1  2   82   72   292 0.998  26.59
 4.01 Init - 150076 149610  467  1  2   66   80   609 0.811  51.02
 4.00 Prom - 150829 150790   40                              -5.66

 5.04 PlyA - 152501 152496    6                               1.05
 5.03 Term - 152828 152731   98  0  2  110   50    49 0.179   1.43
 5.02 Intr - 158666 158508  159  0  0   68   51    89 0.106   3.16
 5.01 Init - 161749 161674   76  1  1   57   66   112 0.263   5.15
 5.00 Prom - 171981 171942   40                              -0.86

 6.00 Prom + 175823 175862   40                              -4.86
 6.01 Init + 195307 195354   48  0  0   99   91    59 0.323   8.27
 6.02 Intr + 211027 211108   82  0  1   79  116   102 0.729  11.31
 6.03 Intr + 214362 214445   84  1  0   69   74    44 0.159   0.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:51229682_51445878|GENSCAN_predicted_peptide_1|235_aa
MNSKGKDRGWQRPSGGVLLAQSERIRSPGSPNARFGVGCAMLLGRLQSRALRLTPSSYPN
YGSLLPPGPFLRQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHP
GAATVPTMSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAG
ARFGAGATAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW

>gi568815586r:51229682_51445878|GENSCAN_predicted_CDS_1|708_bp
atgaacagcaaaggcaaggaccgagggtggcagaggccgtcggggggagtactgctggcc
cagagcgagcggattcggagcccagggtcaccaaacgccaggtttggggtgggctgcgcc
atgctccttggccggctgcagtccagggcgctgcgcctgacgccttcgtcatacccaaat
tacggcagcttgctgcctccaggccctttcctccgtcaatatccaacacagccaacctac
cctgtgcagcctcctgggaatccagtataccctcagaccttgcatcttcctcaggctcca
ccctataccgatgctccacctgcctactcagagctctatcgtccgagctttgtgcaccca
ggggctgccacagtccccaccatgtcagccgcatttcctggagcctctctgtatcttccc
atggcccagtctgtggctgttgggcctttaggttccacaatccccatggcttattatcca
gtcggtcccatctatccacctggctccacagtgctggtggaaggagggtatgatgcaggt
gccagatttggagctggggctactgctggcaacattcctcctccacctcctggatgccct
cccaatgctgctcagcttgcagtcatgcagggagccaacgtcctcgtaactcagcggaag
gggaacttcttcatgggtggttcagatggtggctacaccatctggtga

>gi568815586r:51229682_51445878|GENSCAN_predicted_peptide_2|735_aa
MPGARTSSSGASENHRARGQGGGPQGVGRMAEGKAGGAAGLFAKQVQKKFSRAQEKVLQK
LGKAVETKDERFEQSASNFYQQQAEGHKLYKDLKNFLSAVKVMHESSKRVSETLQEIYSS
EWDGHEELKAIVWNNDLLWEDYEEKLADQAVRTMEIYVAQFSEIKERIAKRGRKLVDYDS
ARHHLEAVQNAKKKDEAKTAKAEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQ
NISNLRDVFYREMSKLNHNLYEVMSKLEKQHSNKVFVVKGLSSPSTLSLKSESESVSATE
DLAPDAAQGEDNSEIKELLEEEEIEKEGSEASSSEEDEPLPACNGPAQAQPSPTTERAKS
QEEVLPSSTTPSPGGALSPSGQPSSSATEVVLRTRTASEGSEQPKKRASIQRTSAPPKPP
EKPVRTPEAKENENIHNQNPEELCTSPTLMTSQVASEPGEAKKMEDKEKDNKLISANSSE
GQDQLQVSMVPENNNLTAPEPQEEEPKPGAAEAQRSAGAEGRGGWERRSPTHRPPPAQRA
PRGAGASRISGARGAGWGPVRLGRLCADRALDGESRPGGGGQSGVPASEASQKAAHGRRL
PVPARLLRCAHSALEPGRGSASSPRNSTTSDNDQPPDYSFSKRISFLFKEELMTTPILQP
TEALSPEDGASTALIAVVITVVFLTLLSVVILIFFYLYKNKGSYVTYEPTEGEPSAIVQM
ESDLAKGSEKEEYFI

>gi568815586r:51229682_51445878|GENSCAN_predicted_CDS_2|2208_bp
atgccgggagcccgcacttcctcctcgggggcctcagaaaaccacagggcgcggggccag
ggcggcggcccccagggagttggcaggatggcagagggcaaggcaggcggcgcggccggc
ctcttcgccaagcaggtgcagaagaagtttagcagggcccaggagaaggtgctgcagaaa
ttggggaaagctgtagaaaccaaagatgaacgatttgaacaaagcgctagcaacttctac
caacaacaggcagaaggccacaagctgtacaaggacctgaagaacttccttagtgcagtc
aaagtgatgcatgaaagttcaaaaagagtgtcagaaaccctgcaggagatctacagcagc
gagtgggacggtcatgaggagctgaaggccatcgtatggaataatgatctcctttgggaa
gactacgaggagaaactggctgaccaggctgtaaggaccatggaaatctatgttgcccag
ttcagtgaaattaaggagagaattgccaagcggggtcggaaactcgtggactatgacagt
gcccgacaccacctggaggcagtgcagaatgccaagaagaaagatgaggccaagactgcc
aaggcagaggaagagttcaacaaagcccagactgtgtttgaagatctgaaccaagaacta
ctagaggagctgcctattctttataatagtcgtattggctgctatgtgaccatcttccaa
aacatttccaacttgagggatgtcttctacagggaaatgagcaagctgaaccacaatctc
tacgaggtgatgagcaaactggagaagcaacattccaataaagtctttgtggtgaaggga
ctgtcaagtccctctacactttccttgaagagtgagagtgaatctgtctcagcaactgaa
gatctggcacctgatgcagcccaaggggaagacaattctgagatcaaggagctcttagaa
gaggaggaaatagagaaggaaggatctgaagcaagctcctctgaggaagatgagcctcta
ccagcctgcaatggccccgcccaggcccagccctctcctaccactgaaagggccaagtcc
caggaggaagttctccccagctccacaactccatcaccaggcggagccctgagcccttca
gggcagccttcatcatctgccacagaagtagtcctccgaacccgcaccgcaagtgaagga
tctgaacaaccaaagaagagagcctctatccagaggacctcagcaccccctaaaccacca
gagaagccagtaagaactcctgaggccaaagaaaatgaaaacatccacaatcagaaccct
gaagaactttgtacttcccccaccttaatgacatctcaggttgcttcagagcctggagag
gcaaagaagatggaagacaaggaaaaggataataagcttatctcagctaactcctcggag
ggccaagaccagcttcaagtctccatggtaccagaaaacaacaacctcacagcacctgaa
cctcaagaagaggaaccgaaacccggagcggccgaagctcagcgctccgctggggcagag
ggtcgcggcggctgggaacgccgctccccgacgcaccggccgcccccagcgcagcgcgct
ccgcggggtgctggggcgtcgaggatctccggggcgcggggcgcgggctggggcccagtg
aggcttggcaggctgtgcgcggaccgcgccctggacggcgaaagcaggcccggagggggc
ggccagtccggcgtcccagcgtccgaggcgagccagaaggcggcccacggccgtcgcctc
ccggtcccggcccggctactgcgctgcgcccactccgctctggagcctgggcgcggatct
gcctcttctccaagaaactcaaccactagtgacaatgaccagcctcctgactactccttc
tccaagagaatttccttcctctttaaggaagaactgatgaccaccccaattttacagccc
actgaggccctgtccccagaagatggagccagcacagcactcattgcagttgttatcacc
gttgtcttcctcaccctgctctcggtcgtgatcttgatcttcttttacctgtacaagaac
aaaggcagctacgtcacctatgaacctacagaaggtgagcccagtgccatcgtccagatg
gagagtgacttggccaagggcagcgagaaagaggaatatttcatctaa

>gi568815586r:51229682_51445878|GENSCAN_predicted_peptide_3|262_aa
MRVLWDHSCLCSHCNSTLREAAYIPESLLEPTEETLASQKERSGQALPVGKKTVSFAAKR
SIKRAWSKQEGSGLLHRQHAGPLCQKTFRVVAGDHNLSQNDGTEQYVSVQKIVVHPYWNS
DNVAAGYDIALLRLAQSVTLNSYVQLGVLPQEGAILANNSPCYITGWGKTKTNGQLAQTL
QQAYLPSVDYAICSSSSYWGSTVKNTMGDSGGPLHCLVNGKYSVHGVTSFVSSRGCNVSR
KPTVFTQVSAYISWINNVIASN

>gi568815586r:51229682_51445878|GENSCAN_predicted_CDS_3|789_bp
atgagggtgctatgggaccacagctgtctttgttcccattgcaactcaaccctgcgggag
gccgcctacatccctgagagccttctggagcctacagaggagacattggccagccaaaag
gaaaggagtggccaggccctgccagttggcaagaagacagtcagctttgctgctaagagg
agtataaagagggcttggtccaagcaagaaggcagtggtctactccatcggcaacatgct
ggtcctttatgccagaagactttccgcgtggtggctggagaccataacctgagccagaat
gatggcactgagcagtacgtgagtgtgcagaagatcgtggtgcatccatactggaacagc
gataacgtggctgccggctatgacatcgccctgctgcgcctggcccagagcgttaccctc
aatagctatgtccagctgggtgttctgccccaggagggagccatcctggctaacaacagt
ccctgctacatcacaggctggggcaagaccaagaccaatgggcagctggcccagaccctg
cagcaggcttacctgccctctgtggactacgccatctgctccagctcctcctactggggc
tccactgtgaagaacaccatgggtgactctgggggccccctccattgcttggtgaatggc
aagtattctgtccatggagtgaccagctttgtgtccagccggggctgtaatgtctccagg
aagcctacagtcttcacccaggtctctgcttacatctcctggataaataatgtcatcgcc
tccaactga

>gi568815586r:51229682_51445878|GENSCAN_predicted_peptide_4|614_aa
MPLRLAMVGCAFVLFLFLLHRDVSSREEATEKPWLKSLVSRKDHVLDLMLEAMNNLRDSM
PKLQIRAPEAQQTLFSINQSCLPGFYTPAELKPFWERPPQDPNAPGADGKAFQKSKWTPL
ETQEKEEGYKKHCFNAFASDRISLQRSLGPDTRPPECVDQKFRRCPPLATTSVIIVFHNE
AWSTLLRTVYSVLHTTPAILLKEIILVDDASTEEHLKEKLEQYVKQLQVVRVVRQEERKG
LITARLLGASVAQAEVLTFLDAHCECFHGWLEPLLARIAEDKTVVVSPDIVTIDLNTFEF
AKPVQRGRVHSRGNFDWSLTFGWETLPPHEKQRRKDETYPIKSPTFAGGLFSISKSYFEH
IGTYDNQMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFPKGTSVIARNQ
VRLAEVWMDSYKKIFYRRNLQAAKMAQEKSFGDISERLQLREQLHCHNFSWYLHNVYPEM
FVPDLTPTFYGAIKNLGTNQCLDVGENNRGGKPLIMYSCHGLGGNQYFEYTTQRDLRHNI
AKQLCLHVSKGALGLGSCHFTGKNSQVPKDEEWELAQDQLIRNSGSGTCLTSQDKKPAMA
PCNPSDPHQLWLFV

>gi568815586r:51229682_51445878|GENSCAN_predicted_CDS_4|1845_bp
atgcccctgcgcctggccatggtgggctgcgcctttgtgctcttcctcttcctcctgcat
agggatgtgagcagcagagaggaggccacagagaagccgtggctgaagtccctggtgagc
cggaaggatcacgtcctggacctcatgctggaggccatgaacaaccttagagattcaatg
cccaagctccaaatcagggctccagaagcccagcagactctgttctccataaaccagtcc
tgcctccctgggttctataccccagctgaactgaagcccttctgggaacggccaccacag
gaccccaatgcccctggggcagatggaaaagcatttcagaagagcaagtggacccccctg
gagacccaggaaaaggaagaaggctataagaagcactgtttcaatgcctttgccagcgac
cggatctccctgcagaggtccctggggccagacacccgaccacctgagtgtgtggaccag
aagttccggcgctgccccccactggccaccaccagcgtgatcattgtgttccacaacgaa
gcctggtccacactgctgcgaacagtgtacagcgtcctacacaccacccctgccatcttg
ctcaaggagatcatactggtggatgatgccagcacagaggagcacctaaaggagaagctg
gagcagtacgtgaagcagctgcaggtggtgagggtggtgcggcaggaggagcggaagggg
ctgatcaccgcccggctgctgggggccagcgtggcacaggcggaggtgctcacgttcctg
gatgcccactgtgagtgcttccacggctggctggagcccctcctggctcgaatcgctgag
gacaagacagtggtggtgagcccagacatcgtcaccatcgaccttaatacttttgagttc
gccaagcccgtccagaggggcagagtccatagccgaggcaactttgactggagcctgacc
ttcggctgggaaacacttcctccacatgagaagcagaggcgcaaggatgaaacctacccc
atcaaatccccgacgtttgctggtggcctcttctccatctccaagtcctactttgagcac
atcggtacctatgataatcagatggagatctggggaggggagaacgtggaaatgtccttc
cgggtgtggcagtgtgggggccagctggagatcatcccctgctctgtcgtaggccatgtg
ttccggaccaagagcccccacaccttccccaagggcactagtgtcattgctcgcaatcaa
gtgcgcctggcagaggtctggatggacagctacaagaagattttctataggagaaatctg
caggcagcaaagatggcccaagagaaatccttcggtgacatttcggaacgactgcagctg
agggaacaactgcactgtcacaacttttcctggtacctgcacaatgtctacccagagatg
tttgttcctgacctgacgcccaccttctatggtgccatcaagaacctcggcaccaaccaa
tgcctggatgtgggtgagaacaaccgcggggggaagcccctcatcatgtactcctgccac
ggccttggcggcaaccagtactttgagtacacaactcagagggaccttcgccacaacatc
gcaaagcagctgtgtctacatgtcagcaagggtgctctgggccttgggagctgtcacttc
actggcaagaatagccaggtccccaaggacgaggaatgggaattggcccaggatcagctc
atcaggaactcaggatctggtacctgcctgacatcccaggacaaaaagccagccatggcc
ccctgcaatcccagtgacccccatcagttgtggctctttgtctag

>gi568815586r:51229682_51445878|GENSCAN_predicted_peptide_5|110_aa
MKGLGQAGPSCLRSLLVAVACSSSLVKQCSRNMNTAVLIVKEREGPEAKEAGRQLLLILQ
MLVDKGPISNEGFESRKDNHCRYCAFCLKCAHLASLTPTRQLVFGPFLPP

>gi568815586r:51229682_51445878|GENSCAN_predicted_CDS_5|333_bp
atgaaggggctgggccaggctggtccctcctgccttcgctctctgctggtcgcggtggcc
tgtagctcctccctcgtcaaacagtgctcaaggaatatgaatacggctgtcctgattgtg
aaagagagagaggggcccgaggcaaaggaggctggcaggcagctcctgctgatcctccag
atgctagttgataaaggcccaatttcaaatgaaggttttgaaagcagaaaggacaaccat
tgcaggtactgtgccttctgcctgaaatgtgctcacctcgcctcgctgactcctactcgc
cagttagtgttcggcccatttctgcccccgtga

>gi568815586r:51229682_51445878|GENSCAN_predicted_peptide_6|72_aa
MPAAGSNEPDGVLSYQRPDEEAVVDQGGTSTILNIHYEKEELEDSSKRLGLTFFGKKNDE
LDGKKMGFVRVX

>gi568815586r:51229682_51445878|GENSCAN_predicted_CDS_6|216_bp
atgccggccgccgggagtaacgagccggacggcgtcctcagctatcagagaccagatgaa
gaagctgtggtggatcagggtgggaccagtacaattctcaacattcactatgaaaaagaa
gagctggaagatagttccaaaagactaggtttgaccttttttggaaaaaagaatgacgag
ttagatgggaaaaaaatgggatttgtgcgagttgnn