GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:33:21

Sequence gi568815588r:74994679_75204076 : 209398 bp : 45.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  11193  11232   40                               0.04
 1.01 Init +  18042  18103   62  2  2   73   59    61 0.488   2.42
 1.02 Intr +  20996  21072   77  2  2   96   34    41 0.114  -1.34
 1.03 Intr +  25904  26135  232  0  1   83  109   128 0.247  11.23
 1.04 Intr +  26448  26607  160  0  1   64   80    62 0.971   2.99
 1.05 Intr +  27203  27553  351  1  0   93  100   487 0.999  45.92
 1.06 Intr +  30280  30571  292  0  1   18  100   218 0.416  12.71
 1.07 Term +  33811  36368 2558  2  2   49   42  2596 0.290 236.49
 1.08 PlyA +  37591  37596    6                               1.05

 2.10 PlyA -  37880  37875    6                               1.05
 2.09 Term -  42180  42017  164  1  2   -1   49   141 0.565  -0.60
 2.08 Intr -  43399  43187  213  2  0  118   89   448 0.670  46.59
 2.07 Intr -  49339  49119  221  0  2   56   61   529 0.878  44.95
 2.06 Intr -  63870  63637  234  2  0   96   80   365 0.563  33.30
 2.05 Intr -  64355  64170  186  1  0   16   81   104 0.401   1.30
 2.04 Intr -  66159  66006  154  1  1   53   41    88 0.016  -0.27
 2.03 Intr -  77271  77188   84  1  0   50   51    79 0.002   0.19
 2.02 Intr -  87061  86948  114  2  0  104   92     6 0.393   3.02
 2.01 Init -  92308  92161  148  1  1   38   32   151 0.482   4.75
 2.00 Prom -  92605  92566   40                              -3.66

 3.10 PlyA -  93300  93295    6                               1.05
 3.09 Term -  95009  94518  492  2  0   -9   35   387 0.364  18.31
 3.08 Intr - 100200 100040  161  1  2   85   23   179 0.567  10.81
 3.07 Intr - 101117 100897  221  1  2  131   50   407 0.979  39.15
 3.06 Intr - 103207 103034  174  0  0   99   66   110 0.978   8.95
 3.05 Intr - 104480 104353  128  2  2    4   74   148 0.361   4.48
 3.04 Intr - 109419 109216  204  0  0   98   75   113 0.002  10.40
 3.03 Intr - 111217 111084  134  2  2   36   56   179 0.002   9.86
 3.02 Intr - 113531 113314  218  1  2  107   41   387 0.995  34.05
 3.01 Init - 114479 114331  149  2  2   62   66   106 0.744   5.52
 3.00 Prom - 116323 116284   40                              -9.75

 4.00 Prom + 116443 116482   40                             -11.14
 4.01 Init + 116871 117011  141  2  0   86   90   181 0.491  16.24
 4.02 Intr + 155836 156428  593  0  2  106  111   280 0.346  23.50
 4.03 Intr + 169967 170062   96  2  0   93   82    14 0.049   0.42
 4.04 Intr + 173863 173980  118  1  1   88   63    -1 0.119  -2.13
 4.05 Intr + 181388 181538  151  1  1   67  101   114 0.710  10.34
 4.06 Term + 199845 199909   65  1  2  107   38    29 0.010  -2.15
 4.07 PlyA + 200684 200689    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  55389  55331   59  0  2   78   50    89 0.875   4.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:74994679_75204076|GENSCAN_predicted_peptide_1|1243_aa
MQNDQPRKGVHTYPQNHGTIWLANPVPSTDTDLSAGFAELNRCLMKSYLLSRREGQAGSP
EKPLSDLGRLSYLAYWKSVILEYLYHHHERHISIKAISRATGMCPHDIATTLQHLHMIDK
RDGRFVIIRREKLILSHMEKLKTCSRANELDPDSLRWTPILISNAAVSEEEREAEKEAER
LMEQASCWEKEEQEILSTRANSRQSPAKVQSKNKYLHSPESRPVTGERGQLLELSKESSE
EEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRKRPFVLK
KKRGRKRRRINSSVTTETISETTEVLNEPFDNSDEERPMPQLEPTCEIEVEEDGRKPVLR
KAFQHQPGKKRQTEEEEGKDNHCFKNADPCRNNMNDDSSNLKEGSKDNPEPLKCKQVWPK
GTKRGLSKWRQNKERKTGFKLNLYTPPETPMEPDEQVTVEEQKETSEGKTSPSPIRIEEE
VKETGEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGE
EEEGGGNVEKDPDGAKSQEKEEPEISTEKEDSARLDDHEEEEEEDEEPSHNEDHDADDED
DSHMESAEVEKEELPRESFKEVLENQETFLDLNVQPGHSNPEVLMDCGVDLTASCNSEPK
ELAGDPEAVPESDEEPPPGEQAQKQDQKNSKEVDTEFKEGNPATMEIDSETVQAVQSLTQ
ESSEQDDTFQDCAETQEACRSLQNYTRADQSPQIATTLDDCQQSDHSSPVSSVHSHPGQS
VRSVNSPSVPALENSYAQISPDQSAISVPSLQNMETSPMMDVPSVSDHSQQVVDSGFSDL
GSIESTTENYENPSSYDSTMGGSICGNGSSQNSCSYSNLTSSSLTQSSCAVTQQMSNISG
SCSMLQQTSISSPPTCSVKSPQGCVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNA
NIGLYERMGQSDFGAGHYPQPSATFSLAKLQQLTNTLIDHSLPYSHSAAVTSYANSASLS
TPLSNTGLVQLSQSPHSVPGGPQAQATMTPPPNLTPPPMNLPPPLLQRNMAASNIGISHS
QRLQTQIASKGHISMRTKSASLSPAAATHQSQIYGRSQTVAMQGPARTLTMQRGMNMSVN
LMPAPAYNVNSVNMNMNTLNAMNGYSMSQPMMNSGYHSNHGYMNQTPQYPMQMQMGMMGT
QPYAQQPMQTPPHGNMMYTAPGHHGYMNTGMSKQSLNGSYMRR

>gi568815588r:74994679_75204076|GENSCAN_predicted_CDS_1|3732_bp
atgcagaatgaccaaccccgcaagggagtccacacctacccacagaaccatggaaccatc
tggcttgcaaacccagtgccgtcgactgatacagacctttcagcaggatttgctgagcta
aacaggtgtctgatgaaaagctatttgctttctagaagagaaggccaagcagggtctcct
gaaaagcctctctccgatctgggccgtctctcctacctggcatattggaagagcgtcatc
ttggagtatctctaccaccaccatgagaggcacatcagcatcaaggcaattagcagagcg
acgggcatgtgcccacatgacattgccaccactctgcagcacctccacatgatcgacaag
agagatggcagatttgtcatcattagacgggaaaagttgatattgagccacatggaaaag
ctgaaaacctgttccagagccaatgaacttgatccagacagtctgaggtggaccccaatt
ttaatttctaatgctgcagtgtctgaagaagagcgagaagctgagaaagaggctgagcgg
ctaatggaacaagctagctgctgggagaaggaggaacaagaaatcctgtcaactagagct
aacagtaggcaatcacctgcaaaagtacaatcgaaaaataaatatttgcattccccggag
agccggccagtcacaggggagcgagggcagctgctggagctgtctaaagagagcagtgaa
gaagaagaggaggaggaggacgaggaggaggaagaagaggaggaagaagaggaagaggat
gaagaggaggaagaagaggaagaagaagaagaagaagaagaaaatattcaaagctctccc
ccaagattgacgaaaccacagtcagttgccataaagagaaagaggccttttgtactaaag
aagaaaaggggtcgtaaacgcaggaggatcaacagcagtgtaacaacagagaccatttca
gagacgacagaagtactgaatgagccctttgacaactcagatgaagagaggccaatgcca
cagctggagcctacctgtgagattgaagtggaggaagatggcaggaagccagtcctgaga
aaagcattccagcatcagcctgggaagaaaagacaaacagaggaagaggaaggaaaagac
aatcattgcttcaagaatgctgacccttgtagaaacaatatgaatgatgattcaagtaac
ttgaaagaaggcagtaaagacaatcccgaacctctaaagtgcaaacaagtgtggccaaaa
ggaacaaagcgcggtctatctaagtggaggcaaaacaaagagaggaagaccggatttaaa
ctgaatttgtacaccccgccagaaacacccatggagcctgacgagcaggtaacagtggaa
gaacagaaggagacttcagaaggaaaaaccagccccagtcccatcaggattgaggaggag
gtcaaggaaactggggaagccctgttgcctcaagaggaaaacagaagggaagaaacatgt
gcccctgtaagtccaaacacatcaccaggtgaaaaaccagaagatgatctcatcaaacct
gaggaagaggaagaggaggaggaggaggaagaggaagaagaggaagaagaggaaggggaa
gaagaagaaggaggaggaaatgtagaaaaagatccagatggtgctaaaagccaagaaaaa
gaggaaccagaaatctccacggaaaaagaagactctgcacgtttggatgatcacgaagag
gaggaggaagaggatgaagagccatcccacaacgaggaccatgatgccgatgacgaggat
gacagccacatggagtctgccgaagtggagaaggaagagctgcccagagaaagcttcaaa
gaagtactggaaaaccaggagacttttttagaccttaatgtgcagcctggtcactcgaac
ccagaggtcttaatggactgtggcgtcgacctgacagcttcttgtaacagtgagcccaag
gagcttgctggggaccctgaagctgtacccgaatctgacgaggagccacccccaggagaa
caggcacagaagcaggaccaaaagaacagcaaggaagtcgatacagagttcaaagaggga
aacccagcaaccatggaaatcgactctgagactgtccaggccgttcagtctttgacccag
gagagcagcgaacaggacgacacctttcaggattgtgccgagactcaagaggcctgtaga
agcctacagaactacacccgtgcagaccaaagtccacagattgccaccacgctcgacgat
tgccaacagtcggaccacagtagcccagtttcatccgtccactcccatcctggccagtcc
gtacgttctgtcaacagcccaagtgtccctgctctggaaaacagctacgcccaaatcagc
ccagatcaaagtgccatctcagtgccatctctgcagaacatggaaaccagtcccatgatg
gatgtcccatcagtttcagatcattcacagcaagtcgtagacagtggatttagtgacctg
ggcagtatcgagagcacaactgagaactacgaaaacccaagcagctacgattctactatg
ggaggcagcatctgtggaaacggctcttcacagaacagctgctcctatagcaacctcacc
tccagcagtctgacacagagcagctgtgctgtcacccagcagatgtccaacatcagcggg
agctgcagcatgctgcagcaaaccagcatcagctcccctccgacctgcagcgtcaagtct
cctcaaggctgtgtggtggagaggcctccgagcagcagccagcagctggctcagtgcagc
atggctgctaacttcaccccacccatgcagctggctgaaatccccgagacgagcaacgcc
aacattggcttatacgagcgaatgggtcagagtgattttggggctgggcattacccgcag
ccgtcagccaccttcagccttgccaaactgcagcagttaactaatacacttattgatcat
tcattgccttacagccattccgctgctgtgacttcctatgcaaacagtgcctctttgtcc
acaccattaagtaacacagggcttgttcaactttctcagtctccacactccgtccctggg
ggaccccaagcacaagctaccatgaccccaccccccaacctgactcctcctccaatgaat
ctgccgccgcctcttttgcaacggaacatggctgcatcaaatattggcatctctcacagc
caaagactgcaaacccagattgccagcaagggccacatctccatgagaaccaagtcagcg
tctctgtcaccagccgctgccacccatcagtcacaaatctatgggcgctcccagactgta
gccatgcagggtcctgcacggactttaacgatgcaaagaggcatgaacatgagtgtgaac
ctgatgccagcgccagcctacaatgtcaactctgtgaacatgaacatgaacactctcaac
gccatgaatgggtacagcatgtcccagccaatgatgaacagtggctaccacagcaatcat
ggctatatgaatcaaacgccccaataccctatgcagatgcagatgggcatgatgggcacc
cagccatatgcccagcagccaatgcagaccccaccccacggtaacatgatgtacacggcc
cccggacatcacggctacatgaacacaggcatgtccaaacagtctctcaatggctcctac
atgagaaggtag

>gi568815588r:74994679_75204076|GENSCAN_predicted_peptide_2|505_aa
MLVKAQKGRLQDHRDGYGDHNSGILQWEEEIGFNSEYGMDKWDFIDKERAALVFERIRAQ
ASCCNRDSRIQWLKQTAAYFSLMSLYRGLPVPVGVIFCRRAFDNQPLVSSAYVFLTSRLI
DIDLFGEMIPAMVVCSSIRRHMMSDHLFLFIRGWQFMLSLWMQQLIRYGLGDVLFPLADG
SLQTLRGPQAWNVRNLLGLPILGPKWPKPVGFSQIKEKVGTKGVKSKESCRKERKSLGSK
MTSGEVKTSLKNAYSSAKRLSPKMEEEGEEEDYCTPGAFELERLFWKGSPQYTHVNEVWP
KLYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDLPTFD
LSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKN
RCVLPNRGFLKQLRELDKQLVQQRRRSQRQDGENGSRHEAGSDSFQGQESQTRQKPKRVA
AVGDAGRQGPGMEMAWRNQNVIKAF

>gi568815588r:74994679_75204076|GENSCAN_predicted_CDS_2|1518_bp
atgcttgttaaagcacagaaaggaagacttcaggaccaccgagatgggtatggggaccac
aacagtgggattttgcagtgggaagaagagattgggttcaactctgaatacggcatggac
aagtgggactttatagacaaggagagggctgcattggtctttgaacgcataagggcacag
gccagttgttgtaacagagactccagaatacagtggcttaaacagacagctgcttatttc
tccctcatgtcactgtacagaggcctgccagtgcctgtcggcgtgatcttctgccggcgc
gcttttgacaaccagccgcttgtgtcttctgcctatgtgttcctcacaagtcggctgata
gatatagacctctttggtgagatgattcccgccatggtggtgtgctcttctattcgaagg
catatgatgtctgaccatctcttcttattcatacgtggctggcagtttatgctcagtctc
tggatgcagcaactcatcaggtatggccttggcgatgtactctttccactggctgacggc
tccctgcagacactgagagggccacaggcctggaatgtcaggaatcttctgggccttcct
attttgggtcccaaatggcccaaaccagtaggtttcagtcagataaaggaaaaagtagga
accaaaggagtaaagtctaaagaaagctgcagaaaggagagaaaatcccttggctctaaa
atgacatctggagaagtgaagacaagcctcaagaatgcctactcatctgccaagaggctg
tcgccgaagatggaggaggaaggggaggaggaggactactgcacccctggagcctttgag
ctggagcggctcttctggaagggcagtccccagtacacccacgtcaacgaggtctggccc
aagctctacattggcgatgaggcgacggcgctggaccgctataggctgcagaaggcgggg
ttcacgcacgtgctgaacgcggcccacggccgctggaacgtggacactgggcccgactac
taccgcgacatggacatccagtaccacggcgtggaggccgacgacctgcccaccttcgac
ctcagtgtcttcttctacccggcggcagccttcatcgacagagcgctaagcgacgaccac
agtaagatcctggttcactgcgtcatgggccgcagccggtcagccaccctggtcctggcc
tacctgatgatccacaaggacatgaccctggtggacgccatccagcaagtggccaagaac
cgctgcgtcctcccgaaccggggctttttgaagcagctccgggagctggacaagcagctg
gtgcagcagaggcgacggtcccagcgccaggacggagaaaacggcagcagacatgaagcg
ggtagtgacagcttccagggccaggaatcccaaaccagacagaaaccaaagagagttgct
gctgttggagatgccggccgtcaaggaccaggcatggaaatggcctggagaaaccagaat
gtgataaaggccttctag

>gi568815588r:74994679_75204076|GENSCAN_predicted_peptide_3|626_aa
MAETSLPELGGEDKATPCPSILELEELLRAGKSSCSRVDEVWPNLFIGDAATANNRFELW
KLGITHVLNAAHKGLYCQGGPDFYGSSVSYLGVPAHDLPDFDISAYFSSAADFIHRALNT
PGGFFTRMSSSAKVLVHCVVGVSRSATLVLAYLMLHQRLSLRQAVITSWSLLPAMGLCHF
ATLALILLVLLEALAQADTQKMVEAQRGVGPRACYSIWLLLAPTPPLSHCLQSPQAHILV
PLKIQLRRVPDSFSQQMPETSYLTRVGPDIQCWPESWGMDSLQKQDLRRPKIHGAVQASP
YQPPTLASLQRLLWVRQAATLNHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGK
FQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGV
SRSATLVLAFLMICENMTLVEAIQTVQAHRNICPNSGFLRQLQPLDCVSFELFADKVSKT
AENFRALSTGEKGFGCKGSCFHRIIPGFMCQGGDFTCHNGTGGKSIYWEKFDDENFILKH
TGPGILSMANAGPNTNGSQFFICTAKTKWLDGKHVAFGKVKEGMNIVEAMEGPGMARPAR
RSPLLTVDNSNKFDLCFILTSRPFLL

>gi568815588r:74994679_75204076|GENSCAN_predicted_CDS_3|1881_bp
atggctgagacctctctcccagagctggggggagaggacaaagccacgccttgccccagc
atcctggagctggaggagctcctgcgggcagggaagtcttcttgcagccgtgtggacgaa
gtttggcccaaccttttcataggagatgcggccacggcaaacaaccgctttgagctgtgg
aagctgggcatcacccacgtgctgaacgccgcccacaagggcctctactgtcagggcggc
cctgacttctacggcagcagtgtgagctacctgggggtgccagcccacgacctccctgat
tttgacatcagtgcctacttctcctctgcggctgacttcatccaccgtgccctcaacacg
cctggggggtttttcaccaggatgtcttcctcagccaaggtcctggtgcactgtgtggtg
ggcgtgagccgctctgccacgctggtcctggcctacctcatgctgcaccagcggctgtcc
ctgcgccaggcggtgatcaccagctggtccttactccctgccatggggctctgccacttt
gccaccctggcactgatcctgctggtgctgctggaggctctggcccaggcggacacacag
aagatggtggaagcccagcgtggggtcggccctagagcctgctactccatctggctcctc
ctggcgcctacaccccctctcagccactgtcttcagtctccacaggcccatattctggtg
ccgctgaaaatccagctccgcagggtccctgactccttcagccagcagatgcctgaaaca
agctacctgacccgggtggggcctgacatccagtgctggcctgagtcgtgggggatggac
tcactgcagaagcaggacctccggaggcccaagatccatggggcagtccaggcatctccc
taccagccgcccacattggcttcgctgcagcgcttgctgtgggtccgtcaggctgccaca
ctgaaccatatcgatgaggtctggcccagcctcttcctgggagatgcgtacgcagcccgg
gacaagagcaagctgatccagctgggaatcacccacgttgtgaatgccgctgcaggcaag
ttccaggtggacacaggtgccaaattctaccgtggaatgtccctggagtactatggcatc
gaggcggacgacaaccccttcttcgacctcagtgtctactttctgcctgttgctcgatac
atccgagctgccctcagtgttccccaaggccgcgtgctggtacactgtgccatgggggta
agccgctctgccacacttgtcctggccttcctcatgatctgtgagaacatgacgctggta
gaggccatccagacggtgcaggcccaccgcaatatctgccctaactcaggcttcctccgg
cagctccagcccttagactgtgtctccttcgagctgtttgcagacaaagtttcaaagaca
gcagaaaactttcgtgctctgagcactggagagaaaggatttggttgtaagggttcctgc
tttcacagaattattccagggtttatgtgtcagggtggtgacttcacatgccataatggc
actggtggcaagtccatctactgggagaaatttgatgatgagaacttcatcctaaagcat
acaggtcctggcatcttatccatggcaaatgctggacccaacacaaatggttcccagttt
ttcatctgcactgccaagactaagtggttggatggcaagcatgtggcctttggcaaggtg
aaagaaggcatgaatattgtggaggccatggagggtccaggaatggcaagaccagcaaga
agatcaccattgctgactgtggacaactctaataagtttgacttgtgttttatcttaacc
tccagaccattccttctgtaa

>gi568815588r:74994679_75204076|GENSCAN_predicted_peptide_4|387_aa
MPARSRHRPRLHSGSPPRAPPPPLEALHSGEAGRAPDSDGGSDADSEAAEEEMAGPNQLC
IRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRL
MLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCDGPITDLNS
DQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDMQTYPPLPD
IFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVFLLRCFTMF
VTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSGHTVVLTML
NFFVTEYCEIVDCYLDPSTVSDTLLVP

>gi568815588r:74994679_75204076|GENSCAN_predicted_CDS_4|1164_bp
atgcctgcgcgcagtcgccaccgcccccgcctccactccggctccccgccccgggctccg
cccccgccgcttgaggcgcttcactccggcgaggcggggagggccccggactccgacggc
ggctcggacgccgactcggaggcagcggaggaggaaatggcaggtcctaatcaactctgc
attcgccgctggactaccaagcatgtagctgtgtggctgaaggatgaaggcttttttgaa
tatgtggacattttatgcaataagcaccgacttgatggaatcacattgctaacattgact
gaatatgatctccggtctcctcctctggaaatcaaagtcttaggggacattaaaaggtta
atgctctcagtccgaaaattgcagaaaatacatattgatgttttagaagagatgggctac
aacagtgacagtcccatgggttccatgacccctttcatcagtgctcttcagagtacagac
tggctctgtaatggggagctttcccatgactgtgacggacccataactgacttgaattct
gatcagtaccagtacatgaatggtaaaaacaaacattctgttcgaagattggacccagaa
tactggaagactatactgagttgtatatatgtttttatagtatttggatttacatctttc
attatggttatagtccatgagcgagtgcctgacatgcagacctatccaccactcccagat
atattcttagacagcgttcctagaatcccatgggcctttgccatgacggaagtatgtggc
atgattctgtgctatatttggctcctggttcttcttcttcacaagcacaggtcaatactt
ctgcgaaggctctgtagtctgatgggaactgtattcttgcttcgctgctttaccatgttt
gtgacctccctctccgtgccaggacaacacctgcagtgtactggaaagatatatggcagt
gtatgggagaaattacatcgagcctttgccatttggagtggctttggtatgaccctgact
ggcgttcacacatgtggagattacatgtttagtggccacacagtcgtcctaactatgctg
aatttctttgtcaccgaatactgtgagattgttgactgttacttagaccccagcacagtg
tctgacacattactagttccttaa