GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:54:31

Sequence gi568815578f:32680324_32907900 : 227577 bp : 48.32% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -   5611   5606    6                               1.05
 1.08 Term -  10456   9857  600  1  0  -44   41   737 0.004  50.33
 1.07 Intr -  24166  24117   50  2  2  122  108     7 0.870   4.50
 1.06 Intr -  24581  24491   91  2  1  102   78    61 0.974   6.07
 1.05 Intr -  26297  26260   38  0  2  132   70    25 0.681   3.08
 1.04 Intr -  26437  26381   57  2  0  121   69    29 0.581   3.16
 1.03 Intr -  47672  47570  103  2  1  106  101    34 0.935   6.25
 1.02 Intr -  63223  62985  239  2  2   22   80   243 0.355  14.23
 1.01 Init -  70154  70007  148  2  1   97   73   111 0.780  10.75
 1.00 Prom -  76758  76719   40                              -3.66

 2.00 Prom +  77429  77468   40                              -9.85
 2.01 Init +  80964  81040   77  2  2   81   78     3 0.459  -0.83
 2.02 Intr +  82106  82376  271  2  1   57   99   220 0.196  17.54
 2.03 Intr +  99995 100142  148  1  1  123   24   238 0.792  20.71
 2.04 Intr + 101030 101091   62  0  2   96   80    22 0.761   0.65
 2.05 Intr + 104435 104536  102  1  0   52   87   108 0.976   7.47
 2.06 Intr + 106179 106304  126  2  0  122    7    87 0.938   4.88
 2.07 Intr + 106907 107128  222  1  0  104   80   138 0.949  12.92
 2.08 Intr + 108531 108689  159  2  0   84  105   134 0.999  14.88
 2.09 Intr + 111278 111385  108  1  0  100   77   121 0.999  12.68
 2.10 Intr + 112288 112447  160  0  1   89   75   137 0.661  12.06
 2.11 Intr + 115086 115211  126  1  0   45   45   183 0.998  10.35
 2.12 Intr + 115327 115371   45  2  0  122   92    46 0.990   6.78
 2.13 Intr + 116467 116546   80  2  2  102  114   -24 0.973   0.87
 2.14 Intr + 116864 116976  113  1  2   64  105   132 0.880  11.68
 2.15 Intr + 118137 118320  184  0  1   52   66   208 0.998  14.79
 2.16 Intr + 118921 119005   85  0  1  119  109   110 0.957  15.59
 2.17 Intr + 119830 119975  146  2  2  110   54   195 0.965  18.30
 2.18 Intr + 120512 120602   91  1  1  127   89    18 0.671   5.37
 2.19 Intr + 120824 120897   74  0  2  112   98    36 0.926   6.13
 2.20 Intr + 121014 121103   90  2  0   31   78   139 0.456   7.39
 2.21 Intr + 122062 122147   86  0  2  120   92    82 0.965  10.42
 2.22 Intr + 125015 125084   70  2  1   41  116    80 0.974   5.28
 2.23 Intr + 125886 126004  119  2  2   90  105    79 0.975   9.06
 2.24 Term + 127439 127580  142  2  1   89   32   184 0.993  10.30
 2.25 PlyA + 131386 131391    6                               1.05

 3.00 Prom + 131905 131944   40                              -3.26
 3.01 Init + 145151 145162   12  1  0   75  100    20 0.476   1.44
 3.02 Intr + 145602 145725  124  2  1   66  110    93 0.787   9.46
 3.03 Intr + 153394 153539  146  2  2  116  106   106 0.999  15.20
 3.04 Intr + 156311 156518  208  1  1   99   98   131 0.653  13.85
 3.05 Intr + 159412 159556  145  2  1   97   94   134 0.948  14.24
 3.06 Intr + 159646 159700   55  1  1   82   58    67 0.890   2.08
 3.07 Intr + 166295 166447  153  1  0   80   42   142 0.944   9.07
 3.08 Term + 168349 168405   57  0  0  105   42    94 0.942   4.19
 3.09 PlyA + 170058 170063    6                               1.05

 4.00 Prom + 172399 172438   40                              -4.96
 4.01 Init + 178117 178173   57  0  0   98   78     9 0.480   2.21
 4.02 Intr + 183215 183511  297  1  0   53  116    47 0.380   1.07
 4.03 Intr + 187259 187424  166  1  1   61   94   100 0.541   7.43
 4.04 Intr + 195603 195721  119  1  2   51   68   265 0.243  20.98
 4.05 Intr + 198381 198484  104  2  2   29   67   136 0.703   4.57
 4.06 Intr + 205182 205317  136  0  1  113   96   140 0.999  17.87
 4.07 Intr + 208978 209083  106  0  1   76   95    85 0.979   7.79
 4.08 Intr + 211890 211974   85  1  1  101  105   136 0.987  15.48
 4.09 Intr + 212851 212975  125  1  2  123   22   128 0.893   9.93
 4.10 Intr + 216131 216204   74  0  2   85  113    59 0.994   7.23
 4.11 Intr + 218170 218300  131  0  2   77  110   135 0.984  14.09
 4.12 Intr + 226239 226306   68  0  2   81  106     6 0.596   0.25
 4.13 Intr + 226520 226671  152  0  2   76   68   241 0.521  20.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  10492   9857  636  1  0   76   41   692 0.939  58.89
S.002 Term + 146672 146727   56  0  2   77   43    64 0.808  -1.48
S.003 Init + 151813 151852   40  0  1   83  108    29 0.917   4.81


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:32680324_32907900|GENSCAN_predicted_peptide_1|441_aa
MGDRCCHGNVLRLDCINVNILVMTLWDLCIEGNRVKATRNVSVSFLKTVSQGGRGRSALR
RPWRKCGCGCAERPAAVAAAAEEEAEQGGGGGGTCGAGARAMGRLHCTEDPVPEAVGGDM
QQLNQLGAQVERFLAQLSEFATTNQISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFI
TLGLSEEKATYFSEKWKQNAPTLARWAIGQTLMINQLIDMEWKFGVTSGSSELEKVGSIF
LQECGEPALPSASEEQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEMVTLPLQPSST
MGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIASSLFESGINWGRVVA
LLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAALNLGNGPILN
VLVVLGVVLLGQFVVRRFFKS

>gi568815578f:32680324_32907900|GENSCAN_predicted_CDS_1|1326_bp
atgggagatcgttgctgccatggaaatgttctgcgtcttgactgtatcaatgtcaatatc
ctggtgatgacactgtgggatctgtgcatcgagggaaaccgggtaaaggccacaaggaat
gtctctgtatcatttcttaaaactgtatcccagggcggccgggggaggagtgcgctgcga
cggccgtggcgaaagtgcggttgtggatgcgcggagaggccggcagcggtggcagcggca
gcggaggaggaagctgagcagggcggcggcggcggtggaacctgcggggctggggcgcgc
gccatgggccgcctgcactgcactgaggacccggtgccggaggccgtgggcggcgacatg
cagcagctgaaccagctgggcgcgcaggtggaaagatttctggctcagctctctgaattt
gccaccaccaatcagatcagtcttggctccctcagaagcatcgtgaaaagcctccttctg
gttccaaatggtgctttgaagaagagtctcacagccaagcaggtccaggcggatttcata
actctgggtcttagtgaggagaaagccacttacttttctgaaaagtggaagcagaatgct
cccacccttgctcgatgggccataggtcagactctgatgattaaccagctcatagatatg
gagtggaaatttggagtgacatctgggagcagcgaattggagaaagtgggaagtatattt
ttacaagagtgcggagagcctgccctgccctctgcttctgaggagcaggtagcccaggac
acagaggaggttttccgcagctacgttttttaccaccatcagcaggaacaggaggctgaa
ggggcggctgcccctgccgacccagagatggtcaccttacctctgcaacctagcagcacc
atggggcaggtgggacggcagctcgccatcattggggacgacatcaaccgacgctatgac
tcagagttccagaccatgttgcagcacctgcagcccacggcagagaatgcctatgagtac
ttcaccaagattgcctccagcctgtttgagagtggcatcaattggggccgtgtggtggct
cttctgggcttcagctaccgtctggccctacacatctaccagcgtggcctgactggcttc
ctgggccaggtgacccgctttgtggtggacttcatgctgcatcactgcattgcccggtgg
attgcacagaggggtggctgggtggcagccctgaacttgggcaatggtcccatcctgaac
gtgctggtggttctgggtgtggttctgttgggccagtttgtggtacgaagattcttcaaa
tcatga

>gi568815578f:32680324_32907900|GENSCAN_predicted_peptide_2|961_aa
MDRGDFRWSHREKPLHKVTFWEKTEGSCSRLRGRSPRGRSERPPTDGTGSLAVGRAGGNA
ARPAALGLSGPSKPSSAIGAGDSRAQRPARPPAGLPPASPDPRLRRPAAPQPALRQESMK
GDTRHLNGEEDAGGREDSILVNGACSDQSSDSPPILEAIRTPEIRGRRSSSRLSKREVSS
LLSYTQDLTGDGDGEDGDGSDTPVMPKLFRETRTRSESPAVRTRNNNSVSSRERHRPSPR
STRGRQGRNHVDESPVEFPATRSLRRRATASAGTPWPSPPSSYLTIDLTDDTEDTHGTPQ
SSSTPYARLAQDSQQGGMESPQVEADSGDGDSSEYQDGKEFGIGDLVWGKIKGFSWWPAM
VVSWKATSKRQAMSGMRWVQWFGDGKFSEVSADKLVALGLFSQHFNLATFNKLVSYRKAM
YHALETLPLQKARVRAGKTFPSSPGDSLEDQLKPMLEWAHGGFKPTGIEGLKPNNTQPEN
KTRRRTADDSATSDYCPAPKRLKTNCYNNGKDRGDEDQSREQMASDVANNKSSLEDGCLS
CGRKNPVSFHPLFEGGLCQTCRDRFLELFYMYDDDGYQSYCTVCCEGRELLLCSNTSCCR
CFCVECLEVLVGTGTAAEAKLQEPWSCYMCLPQRCHGVLRRRKDWNVRLQAFFTSDTGLE
YEAPKLYPAIPAARRRPIRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAVGTVK
HEGNIKYVNDVRNITKKNIEEWGPFDLVIGGSPCNDLSNVNPARKGLYGGHRLVGITLNC
QEAIGNLLVSGNKEGDDRPFFWMFENVVAMKVGDKRDISRFLECNPVMIDAIKVSAAHRA
RYFWGNLPGMNRPVIASKNDKLELQDCLEYNRIAKLKKVQTITTKSNSIKQGKNQLFPVV
MNGKEDVLWCTELERIFGFPVHYTDVSNMGRGARQKLLGRSWSVPVIRHLFAPLKDYFAC
E

>gi568815578f:32680324_32907900|GENSCAN_predicted_CDS_2|2886_bp
atggacaggggagacttcaggtggagtcatcgggaaaagcctctccataaagtgaccttc
tgggagaaaaccgagggcagctgctcccggctccgcggccgcagcccgcgtggacgctcc
gagcgccccccgacggacgggaccggctccctggcggtcgggcgagcgggcggcaacgct
gcccggccggcagcgctggggttaagtggcccaagtaaacctagctcggcgatcggcgcc
ggagattcgcgagcccagcgccctgcacggccgccagccggcctcccgccagccagcccc
gacccgcggctccgccgcccagccgcgccccagccagccctgcggcaggaaagcatgaag
ggagacaccaggcatctcaatggagaggaggacgccggcgggagggaagactcgatcctc
gtcaacggggcctgcagcgaccagtcctccgactcgcccccaatcctggaggctatccgc
accccggagatcagaggccgaagatcaagctcgcgactctccaagagggaggtgtccagt
ctgctaagctacacacaggacttgacaggcgatggcgacggggaagatggggatggctct
gacaccccagtcatgccaaagctcttccgggaaaccaggactcgttcagaaagcccagct
gtccgaactcgaaataacaacagtgtctccagccgggagaggcacaggccttccccacgt
tccacccgaggccggcagggccgcaaccatgtggacgagtcccccgtggagttcccggct
accaggtccctgagacggcgggcaacagcatcggcaggaacgccatggccgtcccctccc
agctcttaccttaccatcgacctcacagacgacacagaggacacacatgggacgccccag
agcagcagtaccccctacgcccgcctagcccaggacagccagcaggggggcatggagtcc
ccgcaggtggaggcagacagtggagatggagacagttcagagtatcaggatgggaaggag
tttggaataggggacctcgtgtggggaaagatcaagggcttctcctggtggcccgccatg
gtggtgtcttggaaggccacctccaagcgacaggctatgtctggcatgcggtgggtccag
tggtttggcgatggcaagttctccgaggtctctgcagacaaactggtggcactggggctg
ttcagccagcactttaatttggccaccttcaataagctcgtctcctatcgaaaagccatg
taccatgctctggagactctgcctttgcagaaagctagggtgcgagctggcaagaccttc
cccagcagccctggagactcattggaggaccagctgaagcccatgttggagtgggcccac
gggggcttcaagcccactgggatcgagggcctcaaacccaacaacacgcaaccagagaac
aagactcgaagacgcacagctgacgactcagccacctctgactactgccccgcacccaag
cgcctcaagacaaattgctataacaacggcaaagaccgaggggatgaagatcagagccga
gaacaaatggcttcagatgttgccaacaacaagagcagcctggaagatggctgtttgtct
tgtggcaggaaaaaccccgtgtccttccaccctctctttgagggggggctctgtcagaca
tgccgggatcgcttccttgagctgttttacatgtatgatgacgatggctatcagtcttac
tgcactgtgtgctgcgagggccgagagctgctgctttgcagcaacacgagctgctgccgg
tgtttctgtgtggagtgcctggaggtgctggtgggcacaggcacagcggccgaggccaag
cttcaggagccctggagctgttacatgtgtctcccgcagcgctgtcatggcgtcctgcgg
cgccggaaggactggaacgtgcgcctgcaggccttcttcaccagtgacacggggcttgaa
tatgaagcccccaagctgtaccctgccattcccgcagcccgaaggcggcccattcgagtc
ctgtcattgtttgatggcatcgcgacaggctacctagtcctcaaagagttgggcataaag
gtaggaaagtacgtcgcttctgaagtgtgtgaggagtccattgctgttggaaccgtgaag
cacgaggggaatatcaaatacgtgaacgacgtgaggaacatcacaaagaaaaatattgaa
gaatggggcccatttgacttggtgattggcggaagcccatgcaacgatctctcaaatgtg
aatccagccaggaaaggcctgtatggtggacatagactggtaggcatcaccctgaactgt
caggaggccattgggaacctgctggtctcagggaataaggagggtgatgaccggccgttc
ttctggatgtttgagaatgttgtagccatgaaggttggcgacaagagggacatctcacgg
ttcctggagtgtaatccagtgatgattgatgccatcaaagtttctgctgctcacagggcc
cgatacttctggggcaacctacccgggatgaacaggcccgtgatagcatcaaagaatgat
aaactcgagctgcaggactgcttggaatacaataggatagccaagttaaagaaagtacag
acaataaccaccaagtcgaactcgatcaaacaggggaaaaaccaacttttccctgttgtc
atgaatggcaaagaagatgttttgtggtgcactgagctcgaaaggatctttggctttcct
gtgcactacacagacgtgtccaacatgggccgtggtgcccgccagaagctgctgggaagg
tcctggagcgtgcctgtcatccgacacctcttcgcccctctgaaggactactttgcatgt
gaatag

>gi568815578f:32680324_32907900|GENSCAN_predicted_peptide_3|299_aa
MGKKKMAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGS
IALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFF
DANYDGKDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKA
GPGVVRKNPGVGNGDDEAAELMQQVGTPVFSTACDTCEPQVLCGEHERGDVNVLKLTVED
LEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVIPDEGGPQEEQEEY

>gi568815578f:32680324_32907900|GENSCAN_predicted_CDS_3|900_bp
atggggaagaagaagatggcagtgaacgtatactcaacgtcagtgaccagtgataaccta
agtcgacatgacatgctggcctggatcaatgagtctctgcagttgaatctgacaaagatc
gaacagttgtgctcaggggctgcgtattgtcagtttatggacatgctgttccctggctcc
attgccttgaagaaagtgaaattccaagctaagctagaacacgagtacatccagaacttc
aaaatactacaagcaggttttaagagaatgggtgttgacaaaataattcctgtggacaaa
ttagtaaaaggaaagtttcaggacaattttgaattcgttcagtggttcaagaagtttttc
gatgcaaactatgatggaaaagactatgaccctgtggctgccagacaaggtcaagaaact
gcagtggctccttcccttgttgctccagctctgaataaaccgaagaaacctctcacttct
agcagtgcagctccccagaggcccatctcaacacagagaaccgctgcggctcctaaggct
ggccctggtgtggtgcgaaagaaccctggtgtgggcaacggagacgacgaggcagctgag
ttgatgcagcaggtgggcacccctgtgtttagcacagcatgtgacacgtgtgagcctcag
gtgctgtgcggggagcatgaacgtggagatgtcaacgtattgaaacttactgttgaagac
ttggagaaagagagggatttctacttcggaaagctacggaacattgaattgatttgccag
gagaacgagggggaaaacgaccctgtattgcagaggattgtagacattctgtatgccaca
gatgaaggctttgtgatacctgatgaagggggcccacaggaggagcaagaagagtattaa

>gi568815578f:32680324_32907900|GENSCAN_predicted_peptide_4|540_aa
MDQDCSGCIKSRPALKSGFDNSSLSGEERLKCKLGKSFLLEKSLGKGMLIHCSLGVSMGK
GKPPSPLTLTSFPPFCDLAKSAFHVVLTTTGVKLTMIPYSRSRLMSSEDLAEIPQLQKLS
IPHGFQNKEAASSPTPSITLSQVPDLQPGSQLFTEIHLAKIEKMFEEDINSTGALGMDAF
IKAMKKVLSSVSDEMLKELFLKVDSDCEGFVTWQKYVDYMMREFQGKEDMRKSQYRLHFY
LPMTVVPLNHGCEVVKVVFLIHRFKKIGCFLTVTKDGILQFWSESFSLMSSFRLNQTQQL
YNQPMWVIDMVCLHNMNLVAVASTRQKIDFFDISDHKCVRAFTFVDLDSCALVMDYWSDY
HRGVFCYGDAKGNVIVFTSENMTSGLFNPRILPRASKWDHWIKVSLQKLLNEKSALHRSY
RLKALHPNWCEQVKFIPQMNVVVSCSAIEKSSLVLTILPAKASKKPRLSVLRLRKGILCF
DYCPDRNFLVTGGYDAFIRLWNPFVSKRPVWLMKGHQTSVTHILVDSRNNSILISVSKDK

>gi568815578f:32680324_32907900|GENSCAN_predicted_CDS_4|1620_bp
atggaccaagattgcagtggctgcatcaagtctaggcctgccctgaagtctggatttgac
aactcctctctatcaggggaagaaaggctcaagtgcaagcttggcaaaagctttttgctg
gagaaatctctgggaaaaggaatgctcatccactgctcgctgggagtgtccatgggcaag
gggaagccaccctctcccttgaccttgacttcttttccacctttctgtgacctggctaag
tcagccttccacgtggtccttacaacgactggagttaagttgactatgattccctattct
aggtcaaggctaatgtcttctgaagacttagcagagatccctcaactccaaaagctgtcc
atcccacatggcttccagaacaaggaggctgctagctccccaacaccatccatcaccctt
agccaggtgcctgacctccagcctgggtcccagctgtttactgagatacacctggccaag
atagagaaaatgtttgaggaggacatcaactcgactggagccctgggcatggacgccttc
atcaaggccatgaagaaggttctgagcagtgtgtcggacgagatgctaaaggagctgttt
ttgaaggtggactcggactgtgaaggctttgtcacctggcaaaagtatgtggattacatg
atgcgtgagttccagggaaaagaggacatgcgaaagagccagtaccgcctgcacttctac
cttcccatgacggtcgtccccctgaaccatggctgtgaggtggtgaaggtggtgttttta
atccaccggttcaagaagatcgggtgtttcctgactgtcaccaaagacgggatcctgcag
ttctggtctgagtccttctcgctgatgagctcctttaggcttaaccagacccagcagctc
tacaaccagccgatgtgggtcattgacatggtatgtctgcacaatatgaacctcgttgca
gttgcgtctaccaggcaaaagatagatttctttgatattagtgaccacaaatgtgtccgg
gccttcacctttgttgatctggacagctgtgctctggtcatggactactggtctgactat
cacagaggtgtgttctgctatggagacgccaaaggcaacgtcattgtcttcacctccgaa
aacatgaccagtgggctgttcaacccccgtatcctccccagggcctccaagtgggatcac
tggatcaaagtttccttgcagaaactcttaaatgagaagtctgctttgcatagaagctac
cggctgaaggctctccatcccaactggtgtgagcaggtcaagttcatcccccagatgaat
gtggtagtctcctgttcagccatcgagaagtcctctctggtgctgacaatattgccagcc
aaagcctctaagaaacccaggttgtcagtgctgcgtttaaggaaagggattctttgcttt
gattactgcccagacaggaacttcctggtgactggtggctacgatgccttcatccgcctg
tggaacccctttgtctcaaagaggcccgtgtggctgatgaagggacaccagacctcagtg
acgcacatccttgtggatagcaggaacaacagcatcctcatcagtgtctccaaggacaag