Result of FASTA (omim) for pF1KB6496
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6496, 358 aa
  1>>>pF1KB6496 358 - 358 aa - 358 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4881+/-0.000363; mu= 15.7892+/- 0.022
 mean_var=72.1713+/-14.123, 0's: 0 Z-trim(114.0): 116  B-trim: 105 in 1/57
 Lambda= 0.150970
 statistics sampled from 23477 (23599) to 23477 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.277), width:  16
 Scan time:  5.550

The best scores are:                                      opt bits E(85289)
NP_057390 (OMIM: 611341) dnaJ homolog subfamily B  ( 358) 2424 537.1 2.2e-152
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316)  464 110.2 6.4e-24
XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ ( 350)  401 96.5 9.4e-20
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B  ( 340)  342 83.7 6.8e-16
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A  ( 412)  341 83.5 9.2e-16
NP_001258510 (OMIM: 607987) dnaJ homolog subfamily ( 747)  337 82.8 2.8e-15
NP_061854 (OMIM: 607987) dnaJ homolog subfamily C  ( 793)  337 82.8 2.9e-15
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453)  329 80.9 6.1e-15
NP_005138 (OMIM: 608382) dnaJ homolog subfamily A  ( 480)  329 80.9 6.4e-15
XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240)  325 79.9 6.6e-15
XP_011526258 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240)  325 79.9 6.6e-15
XP_006722797 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240)  325 79.9 6.6e-15
NP_001300893 (OMIM: 604572) dnaJ homolog subfamily ( 240)  325 79.9 6.6e-15
NP_001287843 (OMIM: 604572) dnaJ homolog subfamily ( 240)  325 79.9 6.6e-15
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211)  321 79.0 1.1e-14
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241)  321 79.0 1.2e-14
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257)  321 79.0 1.3e-14
NP_036460 (OMIM: 602634) dnaJ homolog subfamily B  ( 223)  320 78.8 1.3e-14
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326)  321 79.1 1.6e-14
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334)  321 79.1 1.6e-14
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334)  321 79.1 1.6e-14
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334)  321 79.1 1.6e-14
NP_001300968 (OMIM: 602837) dnaJ homolog subfamily ( 240)  310 76.6 6.4e-14
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A  ( 397)  310 76.7 9.7e-14
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B  ( 409)  307 76.1 1.6e-13
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409)  307 76.1 1.6e-13
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409)  307 76.1 1.6e-13
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411)  307 76.1 1.6e-13
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily (  77)  296 73.3 2.1e-13
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277)  300 74.5 3.2e-13
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324)  300 74.5 3.7e-13
XP_016873165 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  292 72.7   1e-12
XP_016873166 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  292 72.7   1e-12
XP_016873167 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  292 72.7   1e-12
XP_016873164 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  292 72.7   1e-12
XP_011543309 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  292 72.7   1e-12
XP_011543311 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258)  292 72.7   1e-12
NP_001304029 (OMIM: 611327) dnaJ homolog subfamily ( 297)  289 72.1 1.8e-12
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337)  289 72.1   2e-12
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B  ( 337)  289 72.1   2e-12
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B  ( 309)  287 71.7 2.5e-12
XP_011527351 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198)  284 70.9 2.8e-12
XP_011527350 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198)  284 70.9 2.8e-12
NP_079495 (OMIM: 611203) dnaJ homolog subfamily C  ( 198)  284 70.9 2.8e-12
XP_011515922 (OMIM: 613945) PREDICTED: dnaJ homolo ( 180)  279 69.8 5.4e-12
NP_001304030 (OMIM: 611327) dnaJ homolog subfamily ( 222)  280 70.1 5.5e-12
NP_001304031 (OMIM: 611327) dnaJ homolog subfamily ( 222)  280 70.1 5.5e-12
NP_149096 (OMIM: 613945) dnaJ homolog subfamily C  ( 199)  279 69.8 5.9e-12
XP_011515920 (OMIM: 613945) PREDICTED: dnaJ homolo ( 199)  279 69.8 5.9e-12
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B  ( 232)  272 68.3 1.9e-11


>>NP_057390 (OMIM: 611341) dnaJ homolog subfamily B memb  (358 aa)
 initn: 2424 init1: 2424 opt: 2424  Z-score: 2856.8  bits: 537.1 E(85289): 2.2e-152
Smith-Waterman score: 2424; 99.7% identity (100.0% similar) in 358 aa overlap (1-358:1-358)

               10        20        30        40        50        60
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 GPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FRIKVVKHPIFERRGDDLYTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLW
       :::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
NP_057 FRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLW
              250       260       270       280       290       300

              310       320       330       340       350        
pF1KB6 KKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
              310       320       330       340       350        

>>NP_705842 (OMIM: 610263,617091) dnaJ homolog subfamily  (316 aa)
 initn: 392 init1: 218 opt: 464  Z-score: 550.4  bits: 110.2 E(85289): 6.4e-24
Smith-Waterman score: 464; 29.5% identity (62.5% similar) in 325 aa overlap (23-343:2-314)

               10        20        30        40        50        60
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
                             :.:.:..::. :..   .::.:::.:::. :: .. ..
NP_705                      MGQDYYSVLGITRNSEDAQIKQAYRRLALKHHPLKS-NE
                                    10        20        30         

               70        80        90       100       110       120
pF1KB6 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGT
       :.. : :.... ::.::::  ::  :: .:::::: :     :   :.     :..: : 
NP_705 PSSAEIFRQIAEAYDVLSDPMKRGIYDKFGEEGLKGGIPLEFG---SQTPWTTGYVFHGK
       40        50        60        70        80           90     

              130        140       150       160       170         
pF1KB6 PRQQDRNIPRGSDIIVDL-EVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQ
       :..  ...  :.. . .. ..   ::   ::  . ... : .: :  .. .    ..   
NP_705 PEKVFHEFFGGNNPFSEFFDAEGSEVDL-NFGGL-QGRGVKKQDPQVER-DLYLSLEDLF
         100       110       120         130       140        150  

     180        190       200       210       220       230        
pF1KB6 LG-PGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGD
       .:   .......:. ..  .  .  ... : ....:: :.: .  :  ::.   .  :.:
NP_705 FGCTKKIKISRRVLNEDGYSSTI--KDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPAD
            160       170         180       190       200       210

      240       250       260       270       280       290        
pF1KB6 LRFRIKVVKHPIFERRGDDLYTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAK
       . : .:   :: :.:..:.:.    . : ..:.   ...  :: . ..:  . : .:  :
NP_705 IIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHP--K
              220       230       240       250       260          

      300         310       320       330       340       350      
pF1KB6 LWKK--GEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQ
        .::  :::.:  .. . ::.:.: ::..::  .:: . .. ..: :             
NP_705 YFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPT-RLTPQKKQMLRQALLT           
      270       280       290       300        310                 

         
pF1KB6 GY

>>XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ hom  (350 aa)
 initn: 355 init1: 218 opt: 401  Z-score: 475.6  bits: 96.5 E(85289): 9.4e-20
Smith-Waterman score: 401; 27.7% identity (60.2% similar) in 314 aa overlap (36-343:49-348)

          10        20        30        40        50        60     
pF1KB6 LSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQE
                                     .. .:  . ::.:::. :: .. ..:.. :
XP_011 QCPALGLELDAATPGPPSLLDRGVNIHLEHSTAEDKDQRYRRLALKHHPLKS-NEPSSAE
       20        30        40        50        60        70        

          70        80        90       100       110       120     
pF1KB6 KFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGTPRQQD
        :.... ::.::::  ::  :: .:::::: :     :   :.     :..: : :..  
XP_011 IFRQIAEAYDVLSDPMKRGIYDKFGEEGLKGGIPLEFG---SQTPWTTGYVFHGKPEKVF
        80        90       100       110          120       130    

         130          140       150       160       170       180  
pF1KB6 RNIPRGSDII---VDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLG-
       ...  :.. .    : : .  ..  :..    ... : .: :  .. .    ..   .: 
XP_011 HEFFGGNNPFSEFFDAEGSEVDLNFGGL----QGRGVKKQDPQVER-DLYLSLEDLFFGC
          140       150       160           170        180         

             190       200       210       220       230       240 
pF1KB6 PGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRF
         .......:. ..  .  .  ... : ....:: :.: .  :  ::.   .  :.:. :
XP_011 TKKIKISRRVLNEDGYSSTI--KDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIF
     190       200         210       220       230       240       

             250       260       270       280       290       300 
pF1KB6 RIKVVKHPIFERRGDDLYTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWK
        .:   :: :.:..:.:.    . : ..:.   ...  :: . ..:  . : .:  : .:
XP_011 IVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHP--KYFK
       250       260       270       280       290       300       

               310       320       330       340       350        
pF1KB6 K--GEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
       :  :::.:  .. . ::.:.: ::..::  .:: . .. ..: :               
XP_011 KVPGEGMPLPEDPTKKGDLFIFFDIQFPT-RLTPQKKQMLRQALLT             
         310       320       330        340       350             

>>NP_006136 (OMIM: 604572) dnaJ homolog subfamily B memb  (340 aa)
 initn: 587 init1: 271 opt: 342  Z-score: 406.3  bits: 83.7 E(85289): 6.8e-16
Smith-Waterman score: 587; 32.9% identity (62.7% similar) in 343 aa overlap (23-343:2-338)

               10        20        30        40        50        60
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
                             :.:.:. ::. :.:: ..::.:::. ::. :::.: . 
NP_006                      MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-
                                    10        20        30         

               70        80        90       100              110   
pF1KB6 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQS------SHGDIFSH-FFGD-
       : :.:::.... ::.:::: .::. .: ::::::: .  :      ..:  ::. : :: 
NP_006 PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDP
       40        50        60        70        80        90        

                120          130       140       150       160     
pF1KB6 ---FGFMFGG-TPRQQ---DRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPG
          :. .::: .: .    .::  .: ::  :   .   .  :.:..:  ..  . : :.
NP_006 HAMFAEFFGGRNPFDTFFGQRNGEEGMDI--DDPFSGFPMGMGGFTNVNFGRSRSAQEPA
      100       110       120         130       140       150      

         170           180          190       200       210        
pF1KB6 KRKCN--CRQEMRTT--QLGPG---RFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRD
       ..: .    ...:..  ..  :   ....... .  .  ...  ::.. : .:.. : ..
NP_006 RKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIR--NEDKILTIEVKKGWKE
        160       170       180       190         200       210    

      220       230       240       250       260       270        
pF1KB6 GMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTVSLVESLVGFEMDIT
       : .  :  ::.   .. :.:. : .:   : ::.: :.:.   . .:: :.: :  ... 
NP_006 GTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVP
          220       230       240       250       260       270    

      280       290       300       310       320       330        
pF1KB6 HLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREG
        :::. . .    . ::: .    :::::   . . .:.::: :.: :: :.. . .:  
NP_006 TLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFP-ERIPQTSRTV
          280       290       300       310       320        330   

      340       350        
pF1KB6 IKQLLKQGSVQKVYNGLQGY
       ..:.:               
NP_006 LEQVLPI             
           340             

>>NP_005871 (OMIM: 611322) dnaJ homolog subfamily A memb  (412 aa)
 initn: 602 init1: 206 opt: 341  Z-score: 403.9  bits: 83.5 E(85289): 9.2e-16
Smith-Waterman score: 715; 38.5% identity (65.0% similar) in 343 aa overlap (19-328:2-339)

               10        20        30        40        50        60
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
                         : .:   .: ::::: .:: ...:::::::: . :::.::. 
NP_005                  MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPN-
                                10        20        30        40   

               70        80        90       100         110        
pF1KB6 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHG--DIFSHFFGD--FGFM
         : .::.... ::::::. :::. :: :::.::..:  .. :  :::::.::   ::::
NP_005 --AGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFM
               50        60        70        80        90       100

        120       130       140       150       160                
pF1KB6 FGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQA----PGK----RK
        :.  :... .  :: :..  :.:.::..: :. ...  .: :  .:     ::    .:
NP_005 -GNQSRSRN-GRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQK
                110       120       130       140       150        

      170           180                 190            200         
pF1KB6 CN-CRQE---MRTTQLGPGRFQMTQ----------EVV-----CDECPNVKLVNEERTLE
       :. :: .   .   ::.::  :. :          ::.     : .: . :...: . ::
NP_005 CSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILE
      160       170       180       190       200       210        

     210       220       230       240       250       260         
pF1KB6 VEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTVSLVES
       :... :.. :..  : ::..     ::::. . ..  .: .:.: :.::. .  ..:::.
NP_005 VHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEA
      220       230       240       250       260       270        

     270       280       290         300       310       320       
pF1KB6 LVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFP
       : ::.. . ::::... ..    :. .::     .:::.:.. :   ::.: : :::.::
NP_005 LCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP
      280       290       300       310       320       330        

       330       340       350                                     
pF1KB6 KEQLTEEAREGIKQLLKQGSVQKVYNGLQGY                             
       .                                                           
NP_005 ENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDSTRGSGGGQRREAYNDSSDEE
      340       350       360       370       380       390        

>>NP_001258510 (OMIM: 607987) dnaJ homolog subfamily C m  (747 aa)
 initn: 290 init1: 290 opt: 337  Z-score: 395.4  bits: 82.8 E(85289): 2.8e-15
Smith-Waterman score: 337; 42.5% identity (78.8% similar) in 113 aa overlap (9-121:19-129)

                         10        20        30        40        50
pF1KB6           MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLAL
                         .:.:..:.   : . .:::..::: ..:: ..:..:..::::
NP_001 MGVWLNKDDYIRDLKRIILCFLIVYMAILVGTDQDFYSLLGVSKTASSREIRQAFKKLAL
               10        20        30        40        50        60

               60        70        80        90       100       110
pF1KB6 QLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFF
       .::::.::..:.:.  :  .. :::::.: . ::.:: :::.::.: .:... . .... 
NP_001 KLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED-NQGGQYESWNYYR
               70        80        90       100        110         

              120       130       140       150       160       170
pF1KB6 GDFGFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCN
        ::: ..   :                                                 
NP_001 YDFG-IYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGL
     120        130       140       150       160       170        

>>NP_061854 (OMIM: 607987) dnaJ homolog subfamily C memb  (793 aa)
 initn: 291 init1: 291 opt: 337  Z-score: 395.0  bits: 82.8 E(85289): 2.9e-15
Smith-Waterman score: 337; 42.5% identity (78.8% similar) in 113 aa overlap (9-121:19-129)

                         10        20        30        40        50
pF1KB6           MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLAL
                         .:.:..:.   : . .:::..::: ..:: ..:..:..::::
NP_061 MGVWLNKDDYIRDLKRIILCFLIVYMAILVGTDQDFYSLLGVSKTASSREIRQAFKKLAL
               10        20        30        40        50        60

               60        70        80        90       100       110
pF1KB6 QLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFF
       .::::.::..:.:.  :  .. :::::.: . ::.:: :::.::.: .:... . .... 
NP_061 KLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED-NQGGQYESWNYYR
               70        80        90       100        110         

              120       130       140       150       160       170
pF1KB6 GDFGFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCN
        ::: ..   :                                                 
NP_061 YDFG-IYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGL
     120        130       140       150       160       170        

>>NP_001128582 (OMIM: 608382) dnaJ homolog subfamily A m  (453 aa)
 initn: 347 init1: 300 opt: 329  Z-score: 389.2  bits: 80.9 E(85289): 6.1e-15
Smith-Waterman score: 434; 27.5% identity (56.9% similar) in 367 aa overlap (19-355:87-441)

                           10        20        30        40        
pF1KB6             MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKL
                                     : .: .:.:.::::::.:: :.::::: .:
NP_001 PRALLTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQL
         60        70        80        90       100       110      

       50        60        70        80        90       100        
pF1KB6 ALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSS-HG----
       : . ::: : :::.:.:::..:. :::::::  ::::::.::  :.  : ..: :.    
NP_001 AKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKG
        120       130       140       150       160       170      

                  110        120       130       140        150    
pF1KB6 -------DIFSHFFGDFGFM-FGGTPRQQDRNIPRGSDIIVDLEVT-LEEVYAGNFVEVV
              ..: ..::.:.   ::      :.      ..  .  .  ... .. :.... 
NP_001 GPTVDPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTC
        180       190       200       210       220       230      

          160       170           180       190                 200
pF1KB6 RNKPVARQAPGKRKCNCR----QEMRTTQLGPGRFQMTQE-------VV---CDECPNVK
       .      . :: .  .:.    . :.: . ::  .. : .       ..   :  : .. 
NP_001 ERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAG
        240       250       260       270       280       290      

              210         220       230       240       250        
pF1KB6 LVNEERTLEVEIEPGVRDG--MEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDL
        ..... . . .  ::.::  ...: .:. :  .        ::..  : :.:.: : :.
NP_001 QAKQKKRVMIPVPAGVEDGQTVRMP-VGKREIFIT-------FRVQ--KSPVFRRDGADI
        300       310       320        330                340      

      260       270       280       290       300       310        
pF1KB6 YTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSL
       .... .:....:.:       :  . ....    :.   :.   :.:.: . :.   :. 
NP_001 HSDLFISIAQALLGGTARAQGLY-ETINVTIPPGTQTDQKIRMGGKGIPRI-NSYGYGDH
        350       360        370       380       390        400    

      320       330       340       350                 
pF1KB6 IITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY         
        : . .  ::.  ...    ..    . .:. . ::.            
NP_001 YIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGKRSTGN
          410       420       430       440       450   

>>NP_005138 (OMIM: 608382) dnaJ homolog subfamily A memb  (480 aa)
 initn: 347 init1: 300 opt: 329  Z-score: 388.8  bits: 80.9 E(85289): 6.4e-15
Smith-Waterman score: 434; 27.5% identity (56.9% similar) in 367 aa overlap (19-355:87-441)

                           10        20        30        40        
pF1KB6             MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKL
                                     : .: .:.:.::::::.:: :.::::: .:
NP_005 PRALLTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQL
         60        70        80        90       100       110      

       50        60        70        80        90       100        
pF1KB6 ALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSS-HG----
       : . ::: : :::.:.:::..:. :::::::  ::::::.::  :.  : ..: :.    
NP_005 AKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKG
        120       130       140       150       160       170      

                  110        120       130       140        150    
pF1KB6 -------DIFSHFFGDFGFM-FGGTPRQQDRNIPRGSDIIVDLEVT-LEEVYAGNFVEVV
              ..: ..::.:.   ::      :.      ..  .  .  ... .. :.... 
NP_005 GPTVDPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTC
        180       190       200       210       220       230      

          160       170           180       190                 200
pF1KB6 RNKPVARQAPGKRKCNCR----QEMRTTQLGPGRFQMTQE-------VV---CDECPNVK
       .      . :: .  .:.    . :.: . ::  .. : .       ..   :  : .. 
NP_005 ERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAG
        240       250       260       270       280       290      

              210         220       230       240       250        
pF1KB6 LVNEERTLEVEIEPGVRDG--MEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDL
        ..... . . .  ::.::  ...: .:. :  .        ::..  : :.:.: : :.
NP_005 QAKQKKRVMIPVPAGVEDGQTVRMP-VGKREIFIT-------FRVQ--KSPVFRRDGADI
        300       310       320        330                340      

      260       270       280       290       300       310        
pF1KB6 YTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSL
       .... .:....:.:       :  . ....    :.   :.   :.:.: . :.   :. 
NP_005 HSDLFISIAQALLGGTARAQGLY-ETINVTIPPGTQTDQKIRMGGKGIPRI-NSYGYGDH
        350       360        370       380       390        400    

      320       330       340       350                            
pF1KB6 IITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY                    
        : . .  ::.  ...    ..    . .:. . ::.                       
NP_005 YIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAGSKARREAG
          410       420       430       440       450       460    

NP_005 EDEEGFLSKLKKMFTS
          470       480

>>XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolog su  (240 aa)
 initn: 360 init1: 271 opt: 325  Z-score: 388.6  bits: 79.9 E(85289): 6.6e-15
Smith-Waterman score: 325; 27.3% identity (58.2% similar) in 249 aa overlap (105-343:1-238)

           80        90       100       110          120       130 
pF1KB6 EVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGD---FGFMFGGTPRQQDRNIPRG
                                     .:..:::    :  .::      .::  .:
XP_006                               MFAEFFGGRNPFDTFFG------QRNGEEG
                                             10              20    

             140       150       160       170           180       
pF1KB6 SDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCN--CRQEMRTT--QLGPG---R
        ::  :   .   .  :.:..:  ..  . : :...: .    ...:..  ..  :   .
XP_006 MDI--DDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKK
             30        40        50        60        70        80  

          190       200       210       220       230       240    
pF1KB6 FQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIK
       ...... .  .  ...  ::.. : .:.. : ..: .  :  ::.   .. :.:. : .:
XP_006 MKISHKRLNPDGKSIR--NEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK
             90         100       110       120       130       140

          250       260       270       280       290       300    
pF1KB6 VVKHPIFERRGDDLYTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGE
          : ::.: :.:.   . .:: :.: :  ...  :::. . .    . ::: .    ::
XP_006 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGE
              150       160       170       180       190       200

          310       320       330       340       350        
pF1KB6 GLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
       :::   . . .:.::: :.: :: :.. . .:  ..:.:               
XP_006 GLPLPKTPEKRGDLIIEFEVIFP-ERIPQTSRTVLEQVLPI             
              210       220        230       240             




358 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:10:52 2016 done: Fri Nov  4 23:10:53 2016
 Total Scan time:  5.550 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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