GENSCAN 1.0	Date run:  5-Nov-116	Time: 21:43:54

Sequence gi568815588f:72174217_72375185 : 200969 bp : 48.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -   1350   1345    6                               1.05
 1.07 Term -  15751  15632  120  1  0   86   42    42 0.228  -2.13
 1.06 Intr -  22773  22595  179  1  2  106  115   171 0.999  21.24
 1.05 Intr -  29308  29211   98  0  2   90   77     8 0.421  -0.45
 1.04 Intr -  36615  36516  100  1  1   55   78   123 0.555   7.17
 1.03 Intr -  39115  38971  145  1  1   34   84   152 0.043   9.26
 1.02 Intr -  49808  49632  177  2  0   32   44   117 0.006   1.82
 1.01 Init -  52415  52374   42  2  0   62   66    38 0.008  -2.58
 1.00 Prom -  52903  52864   40                              -4.76

 2.00 Prom +  52954  52993   40                              -5.16
 2.01 Init +  53897  53945   49  1  1   67   70    -3 0.180  -3.09
 2.02 Intr +  56150  56224   75  0  0  101  103    33 0.972   5.59
 2.03 Term +  58785  58900  116  1  2   96   43   175 0.966  12.53
 2.04 PlyA +  59508  59513    6                               1.05

 3.00 Prom +  63177  63216   40                              -2.96
 3.01 Init +  69524  69703  180  1  0   84   32    75 0.037   0.68
 3.02 Intr +  86591  86725  135  1  0  157   47    13 0.060   4.86
 3.03 Intr +  99941 100205  265  1  1  112  105   298 0.994  30.99
 3.04 Term + 100479 100972  494  1  2  112   43   799 0.999  72.57
 3.05 PlyA + 101799 101804    6                               1.05

 4.00 Prom + 104620 104659   40                              -4.76
 4.01 Init + 106467 106544   78  2  0   96   73   107 0.563  11.07
 4.02 Intr + 111518 111572   55  1  1   48  103    31 0.353  -0.85
 4.03 Intr + 117675 117743   69  1  0  101   94    60 0.707   7.05
 4.04 Intr + 120171 120208   38  1  2  118   53     3 0.421  -2.22
 4.05 Term + 121684 121974  291  0  0  115   47   156 0.891   9.54
 4.06 PlyA + 122782 122787    6                              -0.45

 5.02 PlyA - 122877 122872    6                               1.05
 5.01 Sngl - 126655 126140  516  1  0   88   43   235 0.934  13.11
 5.00 Prom - 129003 128964   40                              -6.76

 6.00 Prom + 133022 133061   40                              -4.16
 6.01 Init + 135059 135150   92  1  2   65  105    22 0.514   1.57
 6.02 Intr + 135628 135842  215  1  2   81   63    43 0.215  -0.54
 6.03 Intr + 145323 145375   53  1  2   98   47    42 0.126  -0.27
 6.04 Intr + 147555 147577   23  2  2  138   98    -2 0.538   2.14
 6.05 Intr + 147978 148078  101  0  2  110   83    26 0.557   4.05
 6.06 Intr + 149709 149820  112  1  1   85   69     4 0.161  -2.36
 6.07 Term + 151727 152237  511  2  1    6   33   338 0.481  13.95
 6.08 PlyA + 152540 152545    6                               1.05

 7.00 Prom + 153345 153384   40                              -7.86
 7.01 Init + 153863 154010  148  1  1   94   45   114 0.892   6.41
 7.02 Term + 154220 154368  149  0  2   91   45   131 0.994   7.16
 7.03 PlyA + 156323 156328    6                              -0.45

 8.11 PlyA - 157624 157619    6                              -0.45
 8.10 Term - 159411 159238  174  0  0   83   41    93 0.468   1.86
 8.09 Intr - 161323 161186  138  1  0   89   28    70 0.545   1.76
 8.08 Intr - 161715 161618   98  1  2   79   46    89 0.934   3.53
 8.07 Intr - 162480 162308  173  2  2   63   70   277 0.987  22.99
 8.06 Intr - 164095 163986  110  1  2   73   84    88 0.914   5.98
 8.05 Intr - 166652 166573   80  0  2  112   76   159 0.989  16.37
 8.04 Intr - 166954 166769  186  2  0  114   94   288 0.997  31.66
 8.03 Intr - 169295 169150  146  1  2   87  121   189 0.807  22.03
 8.02 Intr - 170911 170734  178  2  1   69   71   164 0.989  11.78
 8.01 Init - 180681 180549  133  0  1   89  101   299 0.492  31.60
 8.00 Prom - 188715 188676   40                              -4.86

 9.02 PlyA - 188769 188764    6                               1.05
 9.01 Term - 194139 193979  161  1  2   99   40   111 0.941   5.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  39082  38971  112  1  1   56   84   115 0.902   8.27
S.002 Sngl +  41426  41671  246  1  0   53   48   197 0.829   7.28
S.003 Term +  86591  86658   68  0  2  157   49    29 0.811   4.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:72174217_72375185|GENSCAN_predicted_peptide_1|286_aa
MRSQLTAASTSQAQVKRAFRGGARSETLKPDPVTELPLTPPAEEDDDEAAISSLAEFLLH
YRERKTAIGKFMEGIIGISFGESVMEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFY
QGSMECADEPCDAYEVEQTPQGFRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPK
PGQDGEIVITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEE
VLAKCSMLLDILVCTCLGLPDGCRQTERLYFLNLIVKTEIKAFGIK

>gi568815588f:72174217_72375185|GENSCAN_predicted_CDS_1|861_bp
atgcgatcacagctcactgcagcctccacctcccaggctcaggtgaaaagggctttccgt
ggtggggcaaggtctgagacactgaaaccagatccagtgacagaacttccactgacccca
ccagctgaggaggatgatgatgaagcagccatttcctctctagcagagttcttacttcac
tacagagaaagaaaaacagcaattggcaagtttatggaaggcataattggaatatcattt
ggagaaagtgtcatggaagttctgcgtccacagcttataagaattgatggccggaattac
aggaagaatccagtccaagaacagacctatcaacatgaagaagatgaagaggacttctat
caaggctccatggagtgtgctgatgagccctgtgatgcctacgaggtggagcagacccca
caaggattccggtctactttgagggcccccagcttgctctataagcatatagttggaaag
agaggggacactaggaagaaaatagaaatggagaccaaaacttctattagcattcctaaa
cctggacaagacggggaaattgtaatcactggccagcatcgaaatggtgtaatttcagcc
cgaacacggattgatgttcttttggacacttttcgaagaaagcagcccttcactcacttc
cttgcctttttcctcaatgaagttgaggttcaggaaggattcctgagattccaggaggaa
gtactggcgaagtgctccatgctcctggatatacttgtgtgcacttgtcttggcttacct
gatggctgccgccagacagaaaggctgtactttcttaatcttatagtgaagacagaaata
aaagcatttggaataaaatag

>gi568815588f:72174217_72375185|GENSCAN_predicted_peptide_2|79_aa
MDAVFNLKRFNLMLHPYGSERFLCESVFSYQVASTLKQVKHDQQVARMEKLAGLVEELEA
DEWRFKPIEQLLGFTPSSG

>gi568815588f:72174217_72375185|GENSCAN_predicted_CDS_2|240_bp
atggatgctgtttttaatctcaaaaggttcaacttgatgttacatccttatggctctgag
agattcctctgcgaatctgtttttagctatcaagtggcatccacgcttaaacaggtgaaa
catgatcagcaagttgctcggatggaaaaactagctggtttggtagaagagctggaggct
gacgagtggcggtttaagcccatcgagcagctgctgggattcaccccctcttcaggttga

>gi568815588f:72174217_72375185|GENSCAN_predicted_peptide_3|357_aa
MEAKRTWEWECRGDDKEPFLEKASLLLNMMMRDSAPHTKGKMPKKRSTHREQHVQSQELQ
GSHQKGANPAPCPHPAAGAPNAELSISVAWLPSSRAVGGASFLPRRLLRSGTLSSSANAL
ASVLTMPSLWDRFSSSSTSSSPSSLPRTPTPDRPPRSAWGSATREEGFDRSTSLESSDCE
SLDSSNSGFGPEEDTAYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLAQARLGSRRPA
RLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVGQLALDPSLVPTFQL
TLVLRLDSRLWPKIQGLFSSANSPFLPGFSQSLTLSTGFRVIKKKLYSSEQLLIEEC

>gi568815588f:72174217_72375185|GENSCAN_predicted_CDS_3|1074_bp
atggaagccaagaggacttgggagtgggaatgccgaggagatgacaaggagcctttccta
gagaaggcgagcctgctcttgaacatgatgatgagagacagcgcgccacacacaaaggga
aagatgccaaagaagcgttccacgcacagggaacagcatgtgcaaagtcaggaactccag
ggctctcaccagaaaggcgccaaccctgcgccctgcccccacccagccgccggggcccca
aatgctgagctcagcatctctgtggcctggctgccctcctcccgggcagtgggaggagcc
tccttcctcccgaggcggcttctacgctccggcactctgagttcatcagcaaacgccctg
gcgtctgtcctcaccatgcctagcctttgggaccgcttctcgtcgtcgtccacctcctct
tcgccctcgtccttgccccgaactcccaccccagatcggccgccgcgctcagcctggggg
tcggcgacccgggaggaggggtttgaccgctccacgagcctggagagctcggactgcgag
tccctggacagcagcaacagtggcttcgggccggaggaagacacggcttacctggatggg
gtgtcgttgcccgacttcgagctgctcagtgaccctgaggatgaacacttgtgtgccaac
ctgatgcagctgctgcaggagagcctggcccaggcgcggctgggctctcgacgccctgcg
cgcctgctgatgcctagccagttggtaagccaggtgggcaaagaactactgcgcctggcc
tacagcgagccgtgcggcctgcggggggcgctgctggacgtctgcgtggagcagggcaag
agctgccacagcgtgggccagctggcactcgaccccagcctggtgcccaccttccagctg
accctcgtgctgcgcctggactcacgactctggcccaagatccaggggctgtttagctcc
gccaactctcccttcctccctggcttcagccagtccctgacgctgagcactggcttccga
gtcatcaagaagaagctgtacagctcggaacagctgctcattgaggagtgttga

>gi568815588f:72174217_72375185|GENSCAN_predicted_peptide_4|176_aa
MGSFMETSGAADAACGYVELAALNVESHSKYLNRQVLLHPLLQGDLVNQQVGEGDLLLPE
AVGAGARGHQGTDSRLSSYQPIGAGEAAGVGPVNRFANQHRVIPALPLVSVWSHDPNCPV
TVKPGTCVTIPKDRASFYSTGTWDDVPLQLQQVLMEPKHFPRQQRQSTNKYKDSGK

>gi568815588f:72174217_72375185|GENSCAN_predicted_CDS_4|531_bp
atgggcagcttcatggaaacttctggggcagcagatgcagcctgtggctatgtggagctg
gcggctctgaatgtagagtcccactccaaatacctcaacaggcaagtcctgctgcaccca
ctcctacaaggtgacttggttaatcagcaggttggggagggggacctgctgctcccagag
gccgtaggtgctggagcacgaggacaccagggaactgactcaaggctctcctcttaccag
cccattggagcaggtgaggctgcaggtgtggggcctgtgaacagatttgccaatcaacac
agggttattcctgccttgcccctggtatctgtgtggtcacatgaccccaactgtccagtt
acagtgaaacccgggacatgtgtcacaattcccaaggacagagcctctttctactcaact
ggaacttgggatgatgtgcccctgcagctgcagcaggtgctcatggagcccaaacacttc
ccaagacagcaaaggcaaagtacaaacaagtacaaagactctgggaaatga

>gi568815588f:72174217_72375185|GENSCAN_predicted_peptide_5|171_aa
MAGCRSRALPRGEAAKARQEIERSGPALLGGPAVLEDRVHPPQPLARVLSPPLPEAAPNA
GPAEPTPTGNSRWPTSTARRPGCHRRLSLHTSLQAEGAGSGLGQPRKGLPQCSGRLKGSS
AAKVGAQAEEVPRASEGCEDCQHAVTSQNDSQCRASFSQRYTCGNNPCSYM

>gi568815588f:72174217_72375185|GENSCAN_predicted_CDS_5|516_bp
atggcgggatgcaggtcccgagccctgccccgcggggaggcagctaaggcccggcaagaa
atcgagcgcagtgggccggcactgctgggtgggccggcagtgctggaggaccgagtacac
cctccgcagccgctggcccgggtgctaagccccccattgcccgaggccgctcctaatgcg
gggcccgccgagcccacgcccaccgggaactcgcgctggcccacaagcaccgcgcgcaga
cccggttgccaccggcgcctctccctccacacctccctgcaagctgagggagccggctct
ggccttggccagcccagaaaggggctcccacagtgcagcggcaggctgaagggctcaagt
gccgccaaagtgggagcccaggcagaggaggtgccgagagcgagcgagggctgtgaggac
tgccagcatgctgtcacctctcagaatgactctcagtgtcgggcctcattctctcaacgt
tacacctgtgggaataatccatgcagttatatgtag

>gi568815588f:72174217_72375185|GENSCAN_predicted_peptide_6|368_aa
MRFGDRVPGNLIWGDSQVQMPLQACTVSARRPEHFAASRNTHGDGTATHTLPSTHSHVLF
AAVKALLTHTFSPAPASTAVPCCLEPGPSSRTTHMFSVGFSQYQTGQRAAIKGVWDEPGG
VGPGGMSQVWLKHTVGPQSTLLTREMSPGMREMTHEAGLGEAQGWGGGMVCVPGSSSDTA
ELGDLGKSLLFSGARFPQWEVWRERREREPGLRAALAGQLEFRVGVGLAAPHSEQPAGPA
APGNEGLSTRASGCGGCTGSPSSASPPALLSISHRVLAAFLRGRARDLQPAMPEPPTPSM
GSCAARASPMSAAPCSTAPSPIDHPRAEECGPTARDWQAAPPAAPVHDPLSEASWAPESG
GDVENLYV

>gi568815588f:72174217_72375185|GENSCAN_predicted_CDS_6|1107_bp
atgaggtttggggaccgagtcccaggaaatctcatatggggtgattcccaggtccagatg
cccttgcaggcttgcactgtgtctgccaggagaccagaacattttgctgccagcagaaac
acacatggtgatggcactgctacccacaccctgccgtcaacacactcccacgtgctgttt
gccgctgtcaaagccctgctcacacacacattctcacccgctcctgccagcacagctgtt
ccctgctgcctggaaccaggcccttcatcccgcacgacacacatgttctctgtgggtttt
tctcaataccagacggggcaaagggcagccatcaaaggtgtctgggacgagcccggcggg
gtggggccaggtggaatgtcacaggtgtggctcaagcacacagtgggtcctcagtccacc
ctgctgaccagggagatgagtcctggcatgagggagatgactcatgaagccgggctgggc
gaggcccagggttggggcggggggatggtctgtgtcccaggcagcagctccgacaccgct
gagctgggcgaccttggcaagtcacttctcttttctggggctcgatttcctcagtgggag
gtgtggagggagaggcgcgagcgggaacccgggctgcgcgcggcgcttgcgggccagcta
gagttccgggtgggcgtgggcttggcggccccgcactcggagcagcccgccggccctgcc
gccccggggaatgaggggcttagcacccgggccagcggctgcggagggtgtactgggtcc
cccagcagtgccagcccaccggcgctgctctcgatttctcaccgggtcttagctgccttc
ctgaggggcagggctcgggacctgcagcccgccatgcctgagcctcccaccccctccatg
ggctcctgtgcggcccgagcctccccgatgagcgccgccccctgctccacagcgcccagt
cccatcgaccacccaagggctgaggagtgcgggcccacagcgcgggactggcaggcagct
ccacctgcagccccggtgcacgatccactgagtgaagccagctgggctcctgagtctggt
ggggacgtggagaacctttatgtctag

>gi568815588f:72174217_72375185|GENSCAN_predicted_peptide_7|98_aa
MDTLAAHVAPAVVVAGLFDLWLEAKLGPTMPPSARRPWAGSQQMAEPARGRGDLGPFQQD
QQDSASPRRQEKEKAPAQCPSHERLLPPATVQLDAHRG

>gi568815588f:72174217_72375185|GENSCAN_predicted_CDS_7|297_bp
atggacacacttgctgcccatgtggcccctgcagtggtggtagctggcttgtttgacttg
tggctggaagcaaaattagggcccacgatgccaccttctgcacgcaggccatgggctggc
agccagcagatggcagagcctgccagagggagaggagacctggggccttttcagcaggat
cagcaggactctgcttccccccggaggcaggaaaaggaaaaagcccccgcccagtgcccg
tcccatgagcgactgctgcctccagccaccgtccagctggatgcacaccgtggctga

>gi568815588f:72174217_72375185|GENSCAN_predicted_peptide_8|471_aa
MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVRALIESLNQKPQTAGDQ
PPPTDTTHATHRKAGGTDAPSANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRG
ASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGDDKSQA
ARHGHGHGDFHRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYQQRQDRRDNQG
DGGLGVFVQLMPILILILVSALSQLMVSSPPYSLSPRPSVGHIHRRVTDHLGVVYYVGDT
FSEEYTGSSLKTVERNVEDDYIANLRNNCWKEKQQKEGLLYRARYFGDTDMYHRAQKMGT
PSCSRLSEGCGGPQNQAEWELETVAEGHPGLLGPLQPSVSTALSPAQQTIVRALVPQGTA
PSLPLVFPKSCTKDFRKFFLRVSQWCRDPRAASSTPEEKAVPVAASVFTRC

>gi568815588f:72174217_72375185|GENSCAN_predicted_CDS_8|1416_bp
atggaatccaacaaggatgaagctgagcgctgtatcagcatcgccctcaaggccatccag
agcaaccagcccgaccgggcgctccgcttcctggagaaggcacagcggctgtatccgacg
ccgcgagttcgcgccctgattgagtccctcaaccagaaaccacagactgccggtgaccaa
cccccacccacagacacaacccatgccacccacaggaaagcaggtgggaccgatgccccc
tcggccaacggtgaagctggaggagagagcaccaaaggctacactgcagaacaggttgca
gctgtgaaaagggtcaagcaatgtaaagattactatgagatcctgggggtgagcagaggg
gcctcggatgaggacctgaagaaggcctaccgcagactggccctcaaattccacccagac
aagaaccacgcacctggtgccactgaagccttcaaagccattggcacagcatatgcggta
ctcagcaacccggagaagaggaagcagtatgaccagttcggcgatgacaagagccaggcg
gcccggcacggccatgggcatggggatttccaccgtggctttgaggccgacatctcccct
gaagacctcttcaacatgttctttggcggcggcttcccttctagtaacgtccacgtctac
agcaacggccgcatgcgctatacctaccagcaaaggcaggaccgcagggacaaccagggt
gatggcgggctaggggtgtttgtgcagctgatgcctatcctcatcctgattctcgtgtca
gctctcagccagctcatggtctccagtccaccctacagtctgagtccaagaccgtccgtg
ggccacatccacaggcgagtcactgaccacctgggtgtcgtctactatgtgggagacact
ttctccgaagagtacacaggctccagcctcaaaacagtcgagcggaatgtggaagatgat
tatatcgccaacctccggaacaactgctggaaggagaagcagcagaaggaaggcttgctg
taccgggcacgctactttggcgacacagatatgtaccacagagcacagaagatgggcacc
cccagctgcagccgactgtcagaggggtgtgggggaccccagaaccaggcagagtgggaa
cttgaaactgttgctgagggccacccggggcttcttggtccactccagccatcagtcagc
acggccctttctccagcacagcagactattgtccgtgccctggtgccacagggcacagct
ccatcattgccactggtttttcctaagtcatgcaccaaggacttcagaaagttcttcctc
cgagtcagtcagtggtgccgggaccccagggcagcctcctcgactcctgaagaaaaggca
gtgcccgtggctgcctctgtcttcactcgctgttga

>gi568815588f:72174217_72375185|GENSCAN_predicted_peptide_9|53_aa
XNGELSNKEFVSIMKQRLMRGLEKPKDMGFTRLMQAMWKCAQETAWDFALPKQ

>gi568815588f:72174217_72375185|GENSCAN_predicted_CDS_9|162_bp
ngcaatggcgaactgagcaataaggaatttgtttccatcatgaagcaacggctgatgaga
ggcctggaaaagcccaaagacatgggtttcactcgcctcatgcaggccatgtggaaatgt
gcacaggaaactgcctgggacttcgctttacccaaacagtaa