Result of FASTA (ccds) for pF1KB6402
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6402, 333 aa
  1>>>pF1KB6402 333 - 333 aa - 333 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4280+/-0.000924; mu= 15.2131+/- 0.055
 mean_var=67.2782+/-13.301, 0's: 0 Z-trim(105.5): 25  B-trim: 0 in 0/50
 Lambda= 0.156364
 statistics sampled from 8463 (8481) to 8463 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.261), width:  16
 Scan time:  2.110

The best scores are:                                      opt bits E(32554)
CCDS6675.1 CTSL gene_id:1514|Hs108|chr9            ( 333) 2321 532.6 1.7e-151
CCDS6723.1 CTSV gene_id:1515|Hs108|chr9            ( 334) 1836 423.2 1.5e-118
CCDS969.1 CTSK gene_id:1513|Hs108|chr1             ( 329) 1131 264.1 1.1e-70
CCDS968.1 CTSS gene_id:1520|Hs108|chr1             ( 331) 1101 257.4 1.2e-68
CCDS55634.1 CTSS gene_id:1520|Hs108|chr1           ( 281)  796 188.5 5.4e-48
CCDS10308.1 CTSH gene_id:1512|Hs108|chr15          ( 335)  796 188.6 6.3e-48
CCDS8144.1 CTSF gene_id:8722|Hs108|chr11           ( 484)  664 158.9 7.9e-39
CCDS3794.1 CTSO gene_id:1519|Hs108|chr4            ( 321)  484 118.2 9.3e-27
CCDS8117.1 CTSW gene_id:1521|Hs108|chr11           ( 376)  395 98.1 1.2e-20
CCDS8282.1 CTSC gene_id:1075|Hs108|chr11           ( 463)  386 96.1 5.8e-20
CCDS13474.1 CTSZ gene_id:1522|Hs108|chr20          ( 303)  305 77.8 1.3e-14


>>CCDS6675.1 CTSL gene_id:1514|Hs108|chr9                 (333 aa)
 initn: 2321 init1: 2321 opt: 2321  Z-score: 2833.2  bits: 532.6 E(32554): 1.7e-151
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)

               10        20        30        40        50        60
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 GLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 TVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKN
              250       260       270       280       290       300

              310       320       330   
pF1KB6 SWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
       :::::::::::::::::::::::::::::::::
CCDS66 SWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
              310       320       330   

>>CCDS6723.1 CTSV gene_id:1515|Hs108|chr9                 (334 aa)
 initn: 1824 init1: 1251 opt: 1836  Z-score: 2241.9  bits: 423.2 E(32554): 1.5e-118
Smith-Waterman score: 1836; 77.2% identity (91.0% similar) in 334 aa overlap (1-333:1-334)

               10        20        30        40        50        60
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIE
       :: .:.:::::::::::.  ::..:...: .::: : :::: ::::::::::::::::::
CCDS67 MNLSLVLAAFCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDW
       ::: :: .:::.::::::::::::.:::::.:. :.:.: ::::::.:::: . :.::::
CCDS67 LHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLDLPKSVDW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNG
       :.:::::::::: :::::::::::::::::::::::.:.::::::::::: ::::.::::
CCDS67 RKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNG
              130       140       150       160       170       180

              190       200       210       220        230         
pF1KB6 GLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDI-PKQEKALMKAV
       :.:  :::::..:::::::::::: :..: ::: :. ::::::::. . : .::::::::
CCDS67 GFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAV
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB6 ATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVK
       :::::::::.:::: :: ::: ::::::::::...::::::::::::...:.:.::::::
CCDS67 ATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVK
              250       260       270       280       290       300

     300       310       320       330   
pF1KB6 NSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
       :::: ::: .::::.:::. ::::::.:::::.:
CCDS67 NSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV
              310       320       330    

>>CCDS969.1 CTSK gene_id:1513|Hs108|chr1                  (329 aa)
 initn: 887 init1: 321 opt: 1131  Z-score: 1382.5  bits: 264.1 E(32554): 1.1e-70
Smith-Waterman score: 1131; 50.9% identity (76.7% similar) in 330 aa overlap (7-331:4-327)

               10        20        30        40         50         
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMI
             : .. : ..: .:  .. :...:  ::  : . :. . .:  :: .::::.:.:
CCDS96    MWGLKVLLLPVVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYI
                  10        20        30        40        50       

      60        70        80        90         100       110       
pF1KB6 ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQN--RKPRKGKVFQEPLFY-EAPR
        .:: :   : :.. .::: .:::::::  : :.:..    . :.. ..  : .  .:: 
CCDS96 SIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPD
        60        70        80        90       100       110       

        120       130       140       150       160       170      
pF1KB6 SVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE
       :::.:.::::::::::::::::::::..::::::. .:::.:..:: :::::: .   :.
CCDS96 SVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--ND
       120       130       140       150       160       170       

        180       190       200       210       220       230      
pF1KB6 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKAL
       ::.:: :  :::::: : :.:::..::: . :::: :::  ..:.  :. .::. .::::
CCDS96 GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKAL
         180       190       200       210       220       230     

         240       250       260       270       280       290     
pF1KB6 MKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKY
        .::: :::.::::::.  :: ::..:.:.. .:.:....:.::.::::...    .::.
CCDS96 KRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK----GNKH
         240       250       260       270       280           290 

         300       310       320       330   
pF1KB6 WLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
       :..::::::.::  ::. ::... : ::::. ::.:  
CCDS96 WIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM
             300       310       320         

>>CCDS968.1 CTSS gene_id:1520|Hs108|chr1                  (331 aa)
 initn: 937 init1: 293 opt: 1101  Z-score: 1345.8  bits: 257.4 E(32554): 1.2e-68
Smith-Waterman score: 1101; 49.7% identity (75.6% similar) in 328 aa overlap (15-333:14-331)

               10        20        30        40         50         
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMI
                     : : :  : .:. .:  ::  ... :   :::. :: .::::.:..
CCDS96  MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFV
                10        20        30        40        50         

      60        70        80        90       100       110         
pF1KB6 ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEA-----
        ::: :.  : ::. ..:: .:::::::  ..:...  : : .   .:. . :..     
CCDS96 MLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSL--RVPSQ---WQRNITYKSNPNRI
      60        70        80        90         100          110    

           120       130       140       150       160       170   
pF1KB6 -PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ
        : :::::::: :: :: ::.::.::::::.::::.:.  :::.:.::: :::::::  .
CCDS96 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK
          120       130       140       150       160       170    

            180       190       200       210       220       230  
pF1KB6 -GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-Q
        ::.:::::.:  ::::. :: :.::. ::::.: ...:.:. :: .:. . ....:  .
CCDS96 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGR
          180       190       200       210       220       230    

             240       250       260       270       280       290 
pF1KB6 EKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESD
       : .: .:::. ::.::..:: : ::..:. :.:.::.:. ....:::::::::    . .
CCDS96 EDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT-QNVNHGVLVVGYG----DLN
          240       250       260       270        280             

             300       310       320       330   
pF1KB6 NNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
       ...:::::::::...:  ::..::... :::::::  ::: .
CCDS96 GKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
     290       300       310       320       330 

>>CCDS55634.1 CTSS gene_id:1520|Hs108|chr1                (281 aa)
 initn: 643 init1: 273 opt: 796  Z-score: 975.1  bits: 188.5 E(32554): 5.4e-48
Smith-Waterman score: 895; 43.5% identity (66.5% similar) in 322 aa overlap (15-333:14-281)

               10        20        30        40         50         
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMI
                     : : :  : .:. .:  ::  ... :   :::. :: .::::.:..
CCDS55  MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFV
                10        20        30        40        50         

      60        70        80        90       100       110         
pF1KB6 ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVD
        ::: :.  : ::. ..:: .:::                                    
CCDS55 MLHNLEHSMGMHSYDLGMNHLGDM------------------------------------
      60        70        80                                       

     120       130       140       150       160       170         
pF1KB6 WREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGC
                    :.::.::::::.::::.:.  :::.:.::: :::::::  . ::.::
CCDS55 -------------GSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGC
                         90       100       110       120       130

      180       190       200       210       220       230        
pF1KB6 NGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMK
       :::.:  ::::. :: :.::. ::::.: ...:.:. :: .:. . ....:  .: .: .
CCDS55 NGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKE
              140       150       160       170       180       190

       240       250       260       270       280       290       
pF1KB6 AVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWL
       :::. ::.::..:: : ::..:. :.:.::.:. ....:::::::::    . ....:::
CCDS55 AVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT-QNVNHGVLVVGYG----DLNGKEYWL
              200       210       220        230           240     

       300       310       320       330   
pF1KB6 VKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
       ::::::...:  ::..::... :::::::  ::: .
CCDS55 VKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
         250       260       270       280 

>>CCDS10308.1 CTSH gene_id:1512|Hs108|chr15               (335 aa)
 initn: 576 init1: 379 opt: 796  Z-score: 973.9  bits: 188.6 E(32554): 6.3e-48
Smith-Waterman score: 796; 39.4% identity (68.2% similar) in 343 aa overlap (3-331:6-331)

                  10           20         30        40        50   
pF1KB6    MNPTLILAAFCLGI---ASATLTFDHSLEA-QWTKWKAMHNRLYGMNEEGWRRAVWE
            : :  .:. ::.   ..: :  . :::  .. .: . : . :. .:   :  .. 
CCDS10 MWATLPLLCAGAWLLGVPVCGAAELCVN-SLEKFHFKSWMSKHRKTYSTEEYHHRLQTFA
               10        20         30        40        50         

            60        70        80        90         100       110 
pF1KB6 KNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQ--VMNGFQNRKPRKGKVFQEPLF
       .: . :. ::.    :.:.: ::.: :.::.  :...  . .  :: .  :.. ..    
CCDS10 SNWRKINAHNN----GNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGP
      60        70            80        90       100       110     

             120        130       140       150       160       170
pF1KB6 YEAPRSVDWREKG-YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCS
       :  : :::::.:: .:.:::::: :::::.::.:::::. .   ::...::.::.::::.
CCDS10 Y--PPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA
           120       130       140       150       160       170   

              180       190       200       210       220          
pF1KB6 GPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFV-DIP
          .:.::.::: . ::.:.  : :. .:..:::.. .  ::..:  ..    ::: :. 
CCDS10 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAI----GFVKDVA
           180       190       200       210       220             

     230           240       250       260         270       280   
pF1KB6 K----QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDC--SSEDMDHGVLVVGY
       .    .:.:...:::  .:.: :... .. :..:. :::   .:  . . ..:.::.:::
CCDS10 NITIYDEEAMVEAVALYNPVSFAFEVTQD-FMMYRTGIYSSTSCHKTPDKVNHAVLAVGY
     230       240       250        260       270       280        

           290       300       310       320       330     
pF1KB6 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV  
       :    :...  ::.:::::: .:::.::  . . . : ::.:. ::::    
CCDS10 G----EKNGIPYWIVKNSWGPQWGMNGYFLIERGK-NMCGLAACASYPIPLV
          290       300       310        320       330     

>>CCDS8144.1 CTSF gene_id:8722|Hs108|chr11                (484 aa)
 initn: 632 init1: 264 opt: 664  Z-score: 810.6  bits: 158.9 E(32554): 7.9e-39
Smith-Waterman score: 664; 38.4% identity (65.6% similar) in 302 aa overlap (36-333:194-483)

          10        20        30        40         50        60    
pF1KB6 ILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEG-WRRAVWEKNMKMIELHNQ
                                     .:: :  .::. :: .:. .::   . . :
CCDS81 SSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ-KIQ
           170       180       190       200       210        220  

           70        80        90       100       110        120   
pF1KB6 EYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYE-APRSVDWREK
          .:  ..  ... :.:.: :::: .. .   ::   .:. :     . ::   ::: :
CCDS81 ALDRGTAQY--GVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSK
            230         240       250       260       270       280

           130       140       150       160       170       180   
pF1KB6 GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLM
       : :: ::.::.::::::::.:: .::: : . : :.:::::.:.::.  . ...: ::: 
CCDS81 GAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD--KMDKACMGGLP
              290       300       310       320         330        

           190       200       210       220       230       240   
pF1KB6 DYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVG
       . :.. ... :::..:..: :..  .::... . . .  .  :.. ..:. :   .:  :
CCDS81 SNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRG
      340       350       360       370       380       390        

           250       260         270       280       290       300 
pF1KB6 PISVAIDAGHESFLFYKEGIY--FEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNS
       ::::::.:   .. ::..::   ..: ::   .::.::.:::: .:    .  .: .:::
CCDS81 PISVAINA--FGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRS----DVPFWAIKNS
      400         410       420       430       440           450  

             310       320       330    
pF1KB6 WGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 
       :: .::  ::  . .   . ::. . ::  .: 
CCDS81 WGTDWGEKGYYYLHRGS-GACGVNTMASSAVVD
            460        470       480    

>>CCDS3794.1 CTSO gene_id:1519|Hs108|chr4                 (321 aa)
 initn: 441 init1: 188 opt: 484  Z-score: 593.8  bits: 118.2 E(32554): 9.3e-27
Smith-Waterman score: 484; 35.4% identity (61.3% similar) in 274 aa overlap (68-329:61-317)

        40        50        60        70        80        90       
pF1KB6 RLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQN
                                     :.. .: ...: :. .  :::. .   .  
CCDS37 PTWPRSREREAAAFRESLNRHRYLNSLFPSENSTAF-YGINQFSYLFPEEFKAI---YLR
               40        50        60         70        80         

       100       110            120       130       140       150  
pF1KB6 RKPRKGKVFQEPLFYEAPR-----SVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMF
        :: :   ..  . .  :        :::.:  :: :.:: .::.:::::..::.:. . 
CCDS37 SKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYA
         90       100       110       120       130       140      

            160       170       180       190        200       210 
pF1KB6 RKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNG-GLDSEESYPYEATEESC
        :   : .:: :...:::   .: :::::    :.....     : ..  ::..: .  :
CCDS37 IKGKPLEDLSVQQVIDCS--YNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLC
        150       160         170       180       190       200    

                 220       230       240       250       260       
pF1KB6 KY----NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEP
       .:    .  .:. . ... :.  ::  . ::. : ::. : .::   :.  :  :: .. 
CCDS37 HYFSGSHSGFSIKGYSAY-DFSDQEDEMAKALLTFGPLVVIVDA--VSWQDYLGGI-IQH
          210       220        230       240         250        260

       270       280       290       300       310         320     
pF1KB6 DCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGY--VKMAKDRRNHCGIA
        ::: . .:.::..  ::..: :  . ::.:.::::  ::. ::  :::..   : ::::
CCDS37 HCSSGEANHAVLIT--GFDKTGS--TPYWIVRNSWGSSWGVDGYAHVKMGS---NVCGIA
              270         280         290       300          310   

         330   
pF1KB6 SAASYPTV
       ...:    
CCDS37 DSVSSIFV
           320 

>>CCDS8117.1 CTSW gene_id:1521|Hs108|chr11                (376 aa)
 initn: 367 init1: 174 opt: 395  Z-score: 484.3  bits: 98.1 E(32554): 1.2e-20
Smith-Waterman score: 477; 30.7% identity (59.8% similar) in 326 aa overlap (25-324:38-354)

                     10        20        30        40        50    
pF1KB6       MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRA-VWE
                                     :.  .  .. . :: :   ::  .:  .. 
CCDS81 SCLLALLVAGLAQGIRGPLRAQDLGPQPLELKEAFKLFQIQFNRSYLSPEEHAHRLDIFA
        10        20        30        40        50        60       

            60        70        80        90          100          
pF1KB6 KNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRK---PRKGK-VFQEP
       .:. . . . ::   :   :  ... :.:.: ::: : . :..      :  :. . .: 
CCDS81 HNLAQAQ-RLQEEDLGTAEF--GVTPFSDLTEEEFGQ-LYGYRRAAGGVPSMGREIRSEE
        70         80          90       100        110       120   

     110       120        130       140       150       160        
pF1KB6 LFYEAPRSVDWRE-KGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVD
           .: : :::.  . ..:.:.: .:. :::..:.: .:     .   ....: :.:.:
CCDS81 PEESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLD
           130       140       150       160       170       180   

      170       180       190       200       210         220      
pF1KB6 CSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPK--YSVANDTGFV
       : :  :. ::.::..  ::  : .:.:: ::..::...  .. . .::   .::    :.
CCDS81 C-GRCGD-GCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFI
             190       200       210       220       230       240 

        230       240       250       260         270       280    
pF1KB6 DIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIY-FEPD-CSSEDMDHGVLVVGYG
        . ..:. . . .:: :::.:.:.   . . .:..:.    :  :. . .::.::.::.:
CCDS81 MLQNNEHRIAQYLATYGPITVTINM--KPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFG
             250       260         270       280       290         

                  290               300       310       320        
pF1KB6 FESTE--------SDNNK--------YWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAA
         ..:        :....        ::..::::: .::  :: .. .   : :::    
CCDS81 SVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGS-NTCGITKFP
     300       310       320       330       340        350        

      330                
pF1KB6 SYPTV             
                         
CCDS81 LTARVQKPDMKPRVSCPP
      360       370      

>>CCDS8282.1 CTSC gene_id:1075|Hs108|chr11                (463 aa)
 initn: 341 init1: 165 opt: 386  Z-score: 471.9  bits: 96.1 E(32554): 5.8e-20
Smith-Waterman score: 436; 31.4% identity (59.0% similar) in 334 aa overlap (32-328:134-454)

              10        20        30        40        50        60 
pF1KB6 NPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIEL
                                     :  . ..  :   :.    . . . .. . 
CCDS82 FFKYKEEGSKVTTYCNETMTGWVHDVLGRNWACFTGKKVGTASENVYVNIAHLKNSQEKY
           110       120       130       140       150       160   

              70        80            90               100         
pF1KB6 HNQEYREGKHSFTMAMNAFGD----MTSEEFRQVM-------NGFQNRK-PRKGKV----
        :. :.   :.:. :.::.       :  :.. .        .: ..:: ::   .    
CCDS82 SNRLYKYD-HNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTA
           170        180       190       200       210       220  

          110       120          130       140       150           
pF1KB6 -FQEPLFYEAPRSVDWRE-KG--YVTPVKNQGQCGSCWAFSATGALEGQM--FRKTGRLI
        .:. ...  : : :::. .:  .:.::.::..::::..:.. : ::...  . ....  
CCDS82 EIQQKILH-LPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTP
            230        240       250       260       270       280 

     160       170       180        190       200       210        
pF1KB6 SLSEQNLVDCSGPQGNEGCNGGL-MDYAFQYVQDNGGLDSEESYPYEATEESCK------
        :: :..:.::  :  .::.::. .  : .:.:: : :  :  .:: .:.  ::      
CCDS82 ILSPQEVVSCS--QYAQGCEGGFPYLIAGKYAQDFG-LVEEACFPYTGTDSPCKMKEDCF
             290         300       310        320       330        

              220       230        240       250       260         
pF1KB6 --YNPKYSVANDTGFVDIPKQEKALMK-AVATVGPISVAIDAGHESFLFYKEGIYF----
         :. .:  ..  ::      ..::::  ..  ::..::... ...:: ::.:::     
CCDS82 RYYSSEYHYVG--GFYG--GCNEALMKLELVHHGPMAVAFEV-YDDFLHYKKGIYHHTGL
      340         350         360       370        380       390   

          270       280       290       300       310       320    
pF1KB6 -EPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI
        .:    :  .:.::.:::: .:  ...  ::.::::::  :: .:: .. .   ..:.:
CCDS82 RDPFNPFELTNHAVLLVGYGTDS--ASGMDYWIVKNSWGTGWGENGYFRIRRGT-DECAI
           400       410         420       430       440        450

          330       
pF1KB6 ASAASYPTV    
        : :         
CCDS82 ESIAVAATPIPKL
              460   




333 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 20:49:15 2016 done: Fri Nov  4 20:49:15 2016
 Total Scan time:  2.110 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com