Result of GENSCAN for pF1KB7626
GENSCAN 1.0	Date run:  7-Nov-116	Time: 04:09:20

Sequence gi568815586r:10601291_10823069 : 221779 bp : 37.79% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1125   1120    6                               1.05
 1.05 Term -   3363   3252  112  2  1   55   42    73 0.151  -3.55
 1.04 Intr -   6646   6564   83  1  2   77  106    56 0.460   3.82
 1.03 Intr -   8651   8541  111  2  0   60   72   134 0.926   8.66
 1.02 Intr -   9390   9332   59  1  2  117  107    29 0.996   5.38
 1.01 Init -  12242  12149   94  2  1   82   93    54 0.975   5.89
 1.00 Prom -  13040  13001   40                              -7.25

 2.10 PlyA -  15373  15368    6                               1.05
 2.09 Term -  19058  18854  205  1  1  106   49   274 0.970  21.16
 2.08 Intr -  23569  23361  209  1  2   85    9    80 0.187  -3.25
 2.07 Intr -  26434  26351   84  1  0  107   99    82 0.977  10.30
 2.06 Intr -  28384  28203  182  2  2  128   88   131 0.991  15.77
 2.05 Intr -  30018  29755  264  1  0   90   93   214 0.999  18.66
 2.04 Intr -  32834  32700  135  0  0   58   98    97 0.983   7.32
 2.03 Intr -  33396  33277  120  1  0   40  103    77 0.159   3.95
 2.02 Intr -  40767  40695   73  0  1   94   61     5 0.028  -3.54
 2.01 Init -  41036  40959   78  2  0   84  110    14 0.412   4.31
 2.00 Prom -  49970  49931   40                              -4.05

 3.03 PlyA -  49992  49987    6                               1.05
 3.02 Term -  60261  60058  204  0  0   49   32   159 0.212   2.79
 3.01 Init -  72957  72664  294  0  0   42   39   228 0.569  10.53
 3.00 Prom -  74524  74485   40                              -5.05

 4.03 PlyA -  75873  75868    6                               1.05
 4.02 Term -  78809  78729   81  2  0   90   34   116 0.375   3.11
 4.01 Init -  94954  94769  186  1  0   65   60   127 0.129   6.71
 4.00 Prom -  98832  98793   40                              -3.95

 5.17 PlyA -  99593  99588    6                               1.05
 5.16 Term - 100063  99998   66  1  0  104   41    37 0.650  -2.44
 5.15 Intr - 100844 100670  175  1  1   94   84   186 0.927  17.82
 5.14 Intr - 102858 102761   98  0  2  109   77   166 0.578  15.49
 5.13 Intr - 104958 104887   72  0  0   56  102    41 0.174   0.98
 5.12 Intr - 108824 108618  207  2  0   59   98   300 0.924  26.45
 5.11 Intr - 112043 111921  123  2  0  103   63   295 0.999  28.36
 5.10 Intr - 114493 114404   90  1  0   99  100   135 0.998  15.07
 5.09 Intr - 116418 116353   66  0  0   61   55    90 0.691   1.18
 5.08 Intr - 121271 120777  495  2  0   56   43   406 0.669  25.16
 5.07 Intr - 121413 121365   49  2  1   49   99    42 0.390  -0.84
 5.06 Intr - 121661 121560  102  1  0   60  109    94 0.104   7.07
 5.05 Intr - 129869 129728  142  0  1  100   91    34 0.018   3.39
 5.04 Intr - 131782 131681  102  2  0  112   58    64 0.122   5.03
 5.03 Intr - 138980 138941   40  2  1   57   87    23 0.036  -4.02
 5.02 Intr - 140034 139891  144  0  0   73   69    82 0.081   4.36
 5.01 Init - 144037 143558  480  1  0   78   86   147 0.055   8.91
 5.00 Prom - 145685 145646   40                              -6.15

 6.12 PlyA - 147231 147226    6                               1.05
 6.11 Term - 148873 148697  177  1  0   41   32   167 0.008   3.10
 6.10 Intr - 154416 153891  526  2  1   43   39   280 0.000  10.62
 6.09 Intr - 162988 162847  142  2  1   85   77    53 0.100   2.39
 6.08 Intr - 163429 163141  289  1  1   21   31   215 0.020   5.00
 6.07 Intr - 173117 173004  114  2  0   79   89    89 0.013   7.82
 6.06 Intr - 190605 190075  531  0  0   51   39   218 0.010   5.40
 6.05 Intr - 191159 190997  163  1  1    2   38   198 0.001   5.26
 6.04 Intr - 196947 196833  115  1  1   33   31   101 0.002  -2.51
 6.03 Intr - 208169 207987  183  0  0  108  -11   164 0.020   7.34
 6.02 Intr - 214857 214704  154  0  1   74   24   115 0.583   2.42
 6.01 Intr - 215656 215550  107  2  2   72   81    65 0.248   3.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 154382 153729  654  2  0   91   36   293 0.876  20.32
S.002 Term + 176028 176123   96  2  0  108   38   113 0.970   5.29
S.003 Sngl - 191131 190838  294  1  0   51   38   265 0.835  13.25
S.004 Term - 208169 207847  323  0  2  108   44   161 0.812   7.70


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10601291_10823069|GENSCAN_predicted_peptide_1|152_aa
MAVASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVME
ELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKCQPQ
KQEQSSFELPVGPQLLVVPQNRLWLLLNKMIH

>gi568815586r:10601291_10823069|GENSCAN_predicted_CDS_1|459_bp
atggctgtggctagcgatttctacctgcgctactacgtagggcacaagggcaagtttggg
cacgagtttctggagttcgaatttcggccggacggaaagcttagatatgccaacaacagc
aattacaaaaatgatgtcatgatcagaaaagaggcttatgtgcacaagagtgtaatggaa
gaactgaagagaattattgatgacagtgaaattacaaaagaagatgatgctttgtggcct
ccccctgatagggttggccgacaggagcttgaaattgtaattggagatgagcacatatct
tttaccacatcaaaaataggttctcttattgatgtaaatcagtcaaaatgtcaacctcag
aaacaggaacaatcgtcttttgaacttccagtaggcccacagttgttggttgttcctcaa
aacaggttgtggctcctgttgaataagatgatccattaa

>gi568815586r:10601291_10823069|GENSCAN_predicted_peptide_2|449_aa
MNDRNEIQMEAKLQSLTIIAQEILCRFFITLRRHARFLLTKLGRQGMARSGITHSCAVCI
LCGPSREGDSPVAMGMTRMLLECSLSDKLCVIQEKQYEVIIVPTLLVTIFLILLGVILWL
FIREQRTQQQRSGPQGIAPVPPPRDLSWEAGHGGNVALPLKETSVENFLGATTPALAKLQ
VPREQLSEVLEQICSGSCGPIFRANMNTGDPSKPKSVILKALKEPAGLHEVQDFLGRIQF
HQYLGKHKNLVQLEGCCTEKLPLYMVLEDVAQGDLLSFLWTCRRDVMTMDGLLYDLTEKQ
VYHIGKQVLLALEFLQEKHLFHGDVAARNILMQSDLTAKLCGLGLAYEVYTRGAISSTQT
IPLKWLAPERLLLRPASIRADVYSIMKSCWRWREADRPSPRELRLRLEAAIKTADDEAVL
QVPELVVPELYAAVAGIRVESLFYNYSML

>gi568815586r:10601291_10823069|GENSCAN_predicted_CDS_2|1350_bp
atgaatgataggaatgagattcaaatggaagccaaactccaaagtcttaccattatagca
caggaaattctatgcaggttctttattacccttaggagacatgcacgtttcctgctcact
aaactaggaaggcaaggaatggcaaggtcaggaattactcacagctgtgctgtgtgcatt
ctctgtgggcctagcagggaaggggacagccctgtggcaatgggcatgacacggatgctc
ctggaatgcagtctcagtgacaagttgtgtgtcatccaggagaagcagtatgaagtgatt
atcgtcccaactttgttggttactatcttcctcatccttcttggggtcatcctgtggctt
tttatcagagaacaaagaactcaacagcagcgttctggacctcaaggcattgcccctgtt
cctccacctagggacctaagctgggaagcaggacatggaggaaatgtggctttgccactt
aaggagacatccgtggaaaactttctgggagctaccacacctgccctggctaagctgcag
gtgccgcgggagcaactctctgaagttctggagcagatttgcagtggtagctgtgggccc
atctttcgagccaatatgaacactggggacccttctaagcccaagagtgttattctcaag
gctttaaaagaaccagctgggctccatgaggtacaagatttcttagggcgaatccaattc
catcaatacctggggaaacacaaaaacctggtgcagctggaaggctgctgcactgaaaag
ctgccactctatatggtgttggaggatgtggcccagggggacctgctcagctttctctgg
acctgtcggcgggatgtgatgactatggatggtcttctctatgatctcacagaaaaacaa
gtatatcacatcggaaagcaggtccttttggcgctggaattcctgcaggagaagcatttg
ttccatggggatgtggcagccaggaatattctgatgcaaagtgatctcactgctaagctc
tgtggattaggcctggcttatgaagtttacacccgaggggccatctcctctactcaaacc
atacctctcaagtggcttgccccagaacggcttctcctgagacctgctagcatcagagca
gatgtgtacagtatcatgaagtcctgctggcgctggcgtgaggctgaccgcccctcacct
agagagctgcgcttgcgcctagaagctgccattaaaactgcagatgacgaggctgtgtta
caagtaccagagttggtggtacctgaactgtatgcagctgtggccggcatcagagtggag
agcctcttctacaactatagcatgctttga

>gi568815586r:10601291_10823069|GENSCAN_predicted_peptide_3|165_aa
MSIDQQQVQPLQLQQRFPVARVWRVPETSEPADFPSREPARTPSFAGSHAPQWEGGTEKH
FLEAGTPCPTQPCHYFPSDWAGAIGNRSDQRRDTVVNGVIVGIKTSIKEVCVKDKYQLRN
SRAGWIPKQIASLGLLAGLCSMQMCEESGFCARGGRDDTDQEYNI

>gi568815586r:10601291_10823069|GENSCAN_predicted_CDS_3|498_bp
atgagtatagatcagcaacaagtccagcctttacagttgcagcagaggtttcctgtggct
cgagtgtggcgagtcccggaaacctcggagcccgcagacttcccttcgcgggagcccgcc
cgaactccatcctttgccggcagccacgccccgcagtgggaaggagggactgaaaagcat
ttccttgaggctggcacaccttgccctacccaaccctgtcattatttcccctccgactgg
gccggtgccatcggaaaccggagtgaccagaggagggacacggtagtgaacggggtaata
gtgggaatcaaaaccagtatcaaggaagtttgtgttaaagacaaatatcagttaaggaat
agcagagcagggtggattccaaagcagattgcttcacttggtttattggctggactgtgc
tccatgcagatgtgtgaagagtctgggttttgtgcaagaggaggaagagatgacacggat
caagaatataacatctaa

>gi568815586r:10601291_10823069|GENSCAN_predicted_peptide_4|88_aa
MTGVLVRSNTRDMRAQGGGHLKKLQEEGRPSASHGEASVNQTCQHLDLGLPTSRPEKRNF
CRGEYSLLEETDKETTNEKRSGTEKKEG

>gi568815586r:10601291_10823069|GENSCAN_predicted_CDS_4|267_bp
atgactggtgttcttgtgaggagcaacaccagagacatgcgtgcacaggggggtggccat
ttgaagaagttgcaagaggaaggaaggccatctgcaagccacggagaggcctcagtgaac
caaacctgccagcaccttgatcttggacttccaacctccagacctgagaaaaggaatttc
tgtcgtggagaatatagcctattagaagaaacagacaaggaaactacaaatgagaaacgc
tctggtaccgagaagaaagaaggatag

>gi568815586r:10601291_10823069|GENSCAN_predicted_peptide_5|816_aa
MPSLTTPIKIVLEVLARAIRQEKEIKSIQLGKEEVKLSLFTDGMIIYLENPTVSAQNLLK
LISNFGKVSGYKINVQKSQALLYTSNRQTESQITSKLPFTIATKRIKYLGIQLTRDVKDL
FKENYKPMLNKIKEDTNKWKNIPDSWIGRINIVKMHILPKLGPLQVLQRLVRNQKFTISN
VKRSFEKLGEAVEKRYSVNTVLKKESSQRSDNKQAKLTRVVVPSNDWTQLEARAKKPVEA
VQSGSFSGAQSREKNGNERDPLITKFTLNRRWSPCGAKGISNPNPAFSRQTSNSNSTVAY
FCRKPRWGRGPRSHGHRGRRLFSHRRRQRRRGEKSSRGLRVPSAGRLPCRRSQTGTVADS
RGGKCLRLEKKGEAVWERGPWVGMDVGEGPTRGPGALGSLLGIWERRAFPLGKRRALEGD
GEGKIEKLLARKGQVSVPDALPTWAWERRHAPVGHMPAKRCCNRLRETWVLVPRLPPPLC
AHGCKQPFSVHQWLHASLFPDCGNARGVAAEKTLSEVGVLVKAPLSEQLSIEVNSAEKQI
TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
YYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPY
HVGQTFDRRSRVLPHPNRIQSYPWSLPYPLPHQQLLKPLNGQIKAGEIGEMKDGVPEGAQ
LQGPVHRNPTYRPRYRSRGPPRPRPAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYR
RRPRPPNAPSQDGKEAKAGEAPTENPAPPTQQSSAE

>gi568815586r:10601291_10823069|GENSCAN_predicted_CDS_5|2451_bp
atgccctctctcaccactcctattaaaatagtgttggaagttctggccagggcaatcagg
caagagaaagaaataaagagtattcaattaggaaaagaggaagtcaaattgtccctgttt
acagatggcatgattatatacttagaaaaccccactgtctcagcccaaaatctccttaag
ctgataagcaacttcggcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagca
ttactatacaccagtaacagacaaacagagagccaaatcacgagtaaactcccattcaca
attgctacaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctc
ttcaaggagaactacaaaccaatgctcaacaaaataaaagaggacacaaacaaatggaag
aacattccagattcatggataggaagaatcaatattgtgaaaatgcacatactgcccaag
ttgggccctcttcaggtgctgcagagattggtgagaaaccagaagttcacaatcagtaat
gtcaaaagaagctttgagaagctgggagaggctgtggaaaaaaggtacagtgtgaacaca
gtcttgaaaaaagaaagctctcagaggagtgataacaaacaagccaagttaactagagtt
gtagtgccctccaatgattggacccagctggaagccagagcaaagaagcctgtagaagct
gttcaaagtggttcattctctggggcacagagcagggagaaaaatggaaatgagagggat
cctctgattaccaaatttactctcaacaggcgttggtccccatgtggagcaaaaggcatc
agtaaccccaatccagctttttctcgacagacttctaactcaaacagcactgtggcctat
ttctgcaggaaaccccggtggggacgcggcccccgcagccacgggcaccgcggccgccgc
ctctttagccaccgccgccggcagcgaagacgcggagaaaaaagttctcggggtctccgg
gtccccagcgctggccgcctcccttgccggcgctcccagacgggcactgttgcggattcg
cgtggtggaaaatgcctgcgtttggagaagaaaggagaggcagtctgggagaggggacct
tgggtagggatggatgtaggggaaggaccgacacgtgggcctggcgctttggggtccttg
cttgggatctgggaaaggagagcatttcctttggggaagaggagggcgctagaaggagac
ggggagggaaagatagaaaagcttcttgccaggaagggtcaggtgtctgtccctgacgcc
cttcccacatgggcatgggaaagacgccatgctcctgttggccacatgccagcaaagaga
tgttgcaatcgtctccgggaaacttgggtcttagtcccacgtcttcctccccctctctgt
gcccacggctgcaaacagccattcagtgtccaccaatggctacacgcttccctcttcccg
gactgtgggaacgcacgtggtgtagcagctgaaaaaactttgtcggaagtgggggtattg
gttaaagctcctctgtcagagcagctctcaattgaagtaaatagcgcagagaagcagata
actgccatcaagaagaataacccacggaaatatctgcgcagtgtaggagatggagaaact
gtagagtttgatgtggttgaaggagagaagggtgcagaagctgccaatgtgactggcccg
gatggagttcctgtggaagggagtcgttacgctgcagatcggcgccgttacagacgtggc
tactatggaaggcgccgtggccctccccggaattacgctggggaggaggaggaggaaggg
agcggcagcagtgaaggatttgacccccctgccactgataggcagttctctggggcccgg
aatcagctgcgccgcccccagtatcgccctcagtaccggcagcggcggttcccgccttac
cacgtgggacagacctttgaccgtcgctcacgggtcttaccccatcccaacagaatacag
agttacccctggtctctcccttacccgttacctcaccaacaacttctaaagccattaaat
gggcagatcaaggctggtgagattggagagatgaaggatggagtcccagagggagcacaa
cttcagggaccggttcatcgaaatccaacttaccgcccaaggtaccgtagcaggggacct
cctcgcccacgacctgccccagcagttggagaggctgaagataaagaaaatcagcaagcc
accagtggtccaaaccagccgtctgttcgccgtggataccggcgtccctacaattaccgg
cgtcgcccgcgtcctcctaacgctccttcacaagatggcaaagaggccaaggcaggtgaa
gcaccaactgagaaccctgctccacccacccagcagagcagtgctgagtaa

>gi568815586r:10601291_10823069|GENSCAN_predicted_peptide_6|833_aa
XLEPEPTELGVVALGQIWMQPKVQPGVIMTPREAPKETGCSQGAACPSCIPQVLRILHFQ
AEEAGLEHPSISSAFSSHQTLLTRAWDFRHTKQIRLHATGFRDPSTEAHMRAIKAVIIFL
LLLIVYYPVFLVMTSSALIPQGKLVLMIELRVTKAFESRTSSTLMEAMVSISLDAVRTSD
TVLYGLRGLEYSEDKKMWESLELPRDWLNGFDQNADSDMNNKVRVEVVSDEDEELLGTEV
KPRDLVPCIPAAPAMAKRGQGTAQVMASGGTSPKFWQLPCGVESAGAQKSIIEVWEPPPR
FQRMCGNAWMSRQRCAAGAGPSWRTSAKAVWKGNVGLETSHRVPTWALPSGAVRRGSPSS
TPQNGRSTNNLHHVPGKTADTQHQPVKAVKREVVPCKPTEAELPRAVAAHLLHQHNLDNP
DFVQGNNVPSGSQVGAFRNSLLADLTVTALELPNYSVRSHGPGSRLAHIDSDSRSAQLQT
GSHDTSVQASPWNPTLQIYLNKPRVQNCYSTSQYQADLMDPSSRTTATDPGSRTDFVDPG
PKTQAYYYIMDPGARPAQILIQTPNQSLQRFCYMAHTESLDELTGEGFSLLKPVYKEWKR
DLVPCIPATPAMTKRGHGTARAIASEGGSPKPWQLPCGIEPAGPQKSIIKVWEPPPRFQR
MYGNSWMSRQKLAAGSGPSWRTSARAVWKGNVRLEPPHRVPTGTPPSGAVRIGPPSSRPQ
NGRSTDSLLHVPGKVTDTQHQPMKAARNGTIPCKATGAELPKAMGAHFLHQHDLDKLAKR
VKAVHKAMTVMAMIPTGEPTVIQTFGNPHSNAKETLPFSSSFYRKRTRKGEIK

>gi568815586r:10601291_10823069|GENSCAN_predicted_CDS_6|2502_bp
ntcttagagccagagcccacagagctgggggtggtggcattggggcagatctggatgcag
cccaaggtacagccaggagtgattatgactcctagagaagctcctaaggagactggatgt
tctcaaggagcagcctgtccatcttgcatcccccaggttctccggattctccatttccaa
gcagaagaagcaggactggagcacccttccatatcatcagccttctcctcgcaccagacc
ttactcaccagggcctgggactttagacacaccaagcagattcgactgcatgctacaggg
ttcagagaccccagtacagaggcccacatgagggccataaaggcagtgatcatctttctg
ctcctcctcatcgtgtactacccagtctttcttgttatgacctctagcgctctgattcct
cagggaaaattagtgttgatgattgagctcagggtcaccaaagcctttgagagcaggact
agcagcaccttgatggaagccatggtatccatctcccttgatgctgtaagaacctcagac
acagtcctttatgggttgagaggtttggagtactcagaagacaaaaagatgtgggagagt
ttggaacttcctagagactggttgaatggctttgaccaaaatgctgatagcgatatgaac
aataaggtccgggttgaggtggtctcagatgaagatgaggaacttttgggaactgaagta
aagcctagggacttagtgccctgcatcccagctgctccagccatggctaaaaggggccaa
ggtacagctcaggtcatggcttcagggggtacaagccccaagttttggcagcttccatgt
ggtgttgagtctgcaggtgcacagaagtcaataattgaggtttgggaacctccacctaga
tttcagagaatgtgtggaaatgcgtggatgtccaggcagaggtgtgctgcaggggctggg
ccctcatggagaacttctgctaaggcagtgtggaagggaaatgtggggttggagacctca
cacagagtccccacttgggcactgcctagtggagctgtgagaagagggtcaccatcctct
acaccccaaaatggtagatccaccaacaacttgcaccatgtacctggaaaaactgcagac
actcaacaccagcctgtgaaagcagtcaagagggaggttgtaccttgcaaacccacagag
gcggagctgcccagggctgtggcagcccaccttttgcatcagcataacctagataaccct
gattttgttcaggggaataatgtgcccagtggatctcaagtgggagcatttcggaactct
ttgctggctgatctgactgtcacagcactggagctccctaactattcagttagatcccat
ggcccaggatccaggctggcccacatagactcagactccaggtctgcccagctccagact
ggttcccatgacaccagtgtccaggccagcccctggaaccccacactacagatttacttg
aacaaacccagggtccagaactgctacagtacatcccaataccaggctgacctcatggac
ccaagctccaggaccactgctacagatccaggatccaggacagactttgtggatccagga
ccaaagacccaagcctactattatatcatggacccaggtgccagacctgctcaaatatta
atccagacaccaaaccagtctctccagagattctgttacatggcccacacagaatctcta
gatgaactgactggtgaagggttttccctgctgaagccagtctataaagaatggaaaagg
gacttggtgccctgcatcccagctactccagccatgactaaaaggggccatggtacagct
cgggctattgcttcagagggtggaagtcccaagccttggcagcttccatgtggtattgag
cctgcaggtccacagaaatctataattaaggtttgggaacctccacctagatttcagagg
atgtatggaaactcctggatgtccaggcagaagttagctgcagggtctgggccctcatgg
agaacttctgctagggcagtgtggaagggaaatgtgagattggagcccccacacagagtc
cctactgggacaccacctagtggagctgtgagaatagggccaccatcctccagaccccag
aatggtagatctaccgacagcttgctccatgtgcctggaaaagtcacagacactcaacac
cagcccatgaaagcagccaggaatgggactataccctgcaaagccacaggggcggagctg
cccaaggccatgggagcccactttttgcatcagcatgacctggataagctggcgaaacgc
gtgaaggccgtacacaaggcaatgacggtgatggcaatgattcccacgggagaaccaact
gtgatccagacctttggcaatcctcacagtaatgcaaaggagactttaccattctcttcc
tcattttacagaaaaagaactagaaagggagaaatcaagtaa
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