GENSCAN 1.0	Date run:  3-Nov-116	Time: 22:36:36

Sequence gi568815591f:90312677_90513408 : 200732 bp : 38.91% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   1519   1414  106  0  1  105   76    73 0.351   7.10
 1.03 Intr -   8037   7905  133  1  1   50   89    96 0.874   4.68
 1.02 Intr -   8881   8578  304  1  1   37   89   197 0.804   9.94
 1.01 Init -  22096  22028   69  1  0   25   75    99 0.346   1.41
 1.00 Prom -  23622  23583   40                              -5.75

 2.04 PlyA -  23811  23806    6                               1.05
 2.03 Term -  34327  33930  398  2  2   55   44   359 0.429  22.45
 2.02 Intr -  36428  36271  158  1  2   65  -77   211 0.298   1.03
 2.01 Init -  36620  36487  134  2  2   62   98   109 0.778   8.96
 2.00 Prom -  37711  37672   40                              -3.65

 3.00 Prom +  37997  38036   40                              -9.45
 3.01 Init +  38196  38312  117  2  0   60   37    90 0.718   1.35
 3.02 Intr +  40140  40333  194  2  2   57  108   219 0.717  18.17
 3.03 Intr +  41782  41873   92  1  2   58   95    99 0.961   6.32
 3.04 Intr +  42410  42554  145  0  1   93  110    89 0.976  10.02
 3.05 Term +  43695  43767   73  0  1   73   41    69 0.601  -2.90
 3.06 PlyA +  45026  45031    6                               1.05

 4.02 PlyA -  45218  45213    6                               1.05
 4.01 Sngl -  47540  47100  441  2  0   71   33   223 0.877  11.10
 4.00 Prom -  47594  47555   40                              -5.65

 5.02 PlyA -  47711  47706    6                               1.05
 5.01 Sngl -  51198  50581  618  0  0   45   42   328 0.717  19.84
 5.00 Prom -  52010  51971   40                              -9.85

 6.05 PlyA -  53080  53075    6                               1.05
 6.04 Term -  53586  53172  415  2  1    1   48   291 0.894  10.15
 6.03 Intr -  53927  53696  232  0  1   40   72   111 0.490   0.61
 6.02 Intr -  55728  55514  215  2  2   -9  102   110 0.543   0.14
 6.01 Init -  56243  56098  146  2  2   88   81   117 0.963  10.64
 6.00 Prom -  57700  57661   40                              -6.45

 7.00 Prom +  58027  58066   40                              -9.05
 7.01 Init +  59303  59325   23  1  2   76   92   -19 0.448  -3.49
 7.02 Intr +  59479  59552   74  1  2   73  103    49 0.530   3.03
 7.03 Intr +  61626  61678   53  1  2  104   96    20 0.565   2.11
 7.04 Intr +  65458  65535   78  0  0  128   56    28 0.829   2.43
 7.05 Intr +  70280  70403  124  1  1   30   92   136 0.982   7.44
 7.06 Term +  72216  72478  263  1  2   90   36   163 0.986   6.00
 7.07 PlyA +  73855  73860    6                               1.05

 8.00 Prom +  84198  84237   40                              -5.05
 8.01 Init +  90661  90873  213  0  0   55   96   187 0.296  15.02
 8.02 Intr +  99980 100430  451  1  1   20   84   347 0.003  19.45
 8.03 Term + 106029 106153  125  1  2   77   48    43 0.181  -3.23
 8.04 PlyA + 106450 106455    6                               1.05

 9.06 PlyA - 108195 108190    6                               1.05
 9.05 Term - 109443 109309  135  0  0   86   48    59 0.478  -1.26
 9.04 Intr - 109860 109793   68  1  2   32  101    67 0.437   0.11
 9.03 Intr - 110217 110118  100  0  1   89  100    27 0.818   2.76
 9.02 Intr - 111851 111795   57  2  0   85   75    94 0.891   5.96
 9.01 Init - 128467 128369   99  1  0   51   48   173 0.128   9.91
 9.00 Prom - 133721 133682   40                              -4.95

10.00 Prom + 135659 135698   40                              -3.65
10.01 Init + 145512 145554   43  2  1   80   60    56 0.019   2.63
10.02 Intr + 153620 153837  218  0  2  118   99    72 0.044   8.60
10.03 Term + 162357 162464  108  2  0   30   43   126 0.385  -0.17
10.04 PlyA + 163378 163383    6                               1.05

11.06 PlyA - 163556 163551    6                               1.05
11.05 Term - 165747 165659   89  1  2   69   49    68 0.072  -2.16
11.04 Intr - 168738 168605  134  2  2   20   -1   156 0.235  -0.73
11.03 Intr - 172805 172662  144  1  0   49  106   102 0.313   6.58
11.02 Intr - 181365 181302   64  1  1   77   94    40 0.238   0.36
11.01 Init - 182036 181988   49  2  1   83   58    65 0.389   2.20
11.00 Prom - 190130 190091   40                              -3.55


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100430  430  1  1   83   84   340 0.812  27.96
S.002 Init - 113133 113125    9  0  0   72  106     0 0.837   0.78
S.003 Init + 157111 157255  145  0  1   53   96   137 0.933   9.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_1|204_aa
MGLGTVEQGAALVGRLGLRRSPQLRKKKEQSKKERAKKTLSLWHSKKVGGGQERREQRPK
QGRRAQRPPRSGGWEVGRGQGGASRARPPTICPLTQPLEKDRGPSGGSVSGTPRGRSRTG
SSTRGRWQTAVYGGKGESCVLDLFSSPYPSPLAVNVVKGTFPTAALNSRIPRYTELSCLL
RFLWVVTMSQTMFLMTLTILSTGQ

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_1|612_bp
atgggactgggcaccgtggagcagggggcggcgctggtcgggaggctcggtctgcgcagg
agcccacagctaagaaaaaagaaggaacaaagtaagaaggagagagcgaagaagaccctg
agcctttggcatagcaagaaagtcggaggagggcaggagaggcgagagcagcggccaaag
cagggccgcagggcgcagaggcccccgaggtctggaggctgggaagttgggcgaggtcag
ggaggggcctcgagagcgcggccacccacgatctgccccctcactcagcctctagaaaag
gatcgcggtcccagcggcgggtctgtctcgggaaccccgcgtggccgcagcagaaccggc
agctccacccgcgggaggtggcagacggctgtgtacggggggaaaggtgagtcctgtgtt
ctggatctgttctcctctccctatccctccccgttggctgtcaatgttgtaaaagggaca
tttccaacagcagccttgaatagcaggatcccacgttacaccgagttgtcatgtcttctg
aggttcctgtgggttgtgacaatgtctcagaccatgtttttgatgaccttgacaattttg
agtactggtcag

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_2|229_aa
MIFYEKDCQPWKRTLIEKTSGKSEVYIIEDAIIIEKAMKAISPKQIYKRANQGNHERGCE
YAKNGGKVGKGLQDMDLEETQELTATKPEELTEDSLMKLQTLPLPPNNRPNHARYTHHCH
RLLTKRHYRRGGEVYGKTKQGKGRHEDSSGETGEQRRTRAVSAKGTRLRGPARTFLNNTQ
LQCTMAATGQETFLRKRHKPQYSAAFLRHPLPPTRFLLRPHLRTGACVV

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_2|690_bp
atgattttctacgaaaaggattgtcaaccatggaaaagaacactaatagagaaaacttca
ggaaaatctgaagtttacataattgaagatgccattattattgaaaaagccatgaaagcc
ataagccccaaacagatttacaaaagagccaatcaaggaaatcatgaaagaggctgtgaa
tatgccaaaaacggcgggaaagtgggtaaaggacttcaagatatggatcttgaagaaact
caagagctaacagccaccaaaccagaggaattaacagaagacagcttgatgaaacttcaa
accctgcccctgcccccaaacaaccgtccaaaccacgccaggtacacacaccactgtcac
cgcttactgacaaagcgccactacaggaggggcggagaagtctatgggaaaaccaagcaa
ggaaaaggccgccacgaagacagtagtggagagacaggggagcaaagaagaaccagagct
gtcagcgctaaggggaccaggctgaggggacccgcacggacctttctgaacaacacgcaa
ctgcaatgcaccatggctgcaacaggccaggaaaccttcttgcggaagcggcacaagccg
cagtacagcgcggcctttttacgtcatcccctgccgccgacgcgatttctcctccgccca
cacctgcggactggcgcatgcgttgtgtga

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_3|206_aa
MTLLLGSTASITSGTLYGFHGGVQGLQCSAEHDEKCKRTYGNFIDKLRLFTRGGSGGMGY
PRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKGKDCEIPV
PVGISVTDENGKIIGELNKENDRILVAQGGLGGKLLTNFLPLKGQKRIIHLDLKLIADVG
LVGNIMGLIGSYGQDWQSSQSQLHFA

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_3|621_bp
atgactttacttcttgggagcactgccagcatcactagtggcactttgtatgggttccat
ggtggtgttcaaggtttacagtgtagcgctgaacatgatgaaaaatgcaagagaacttat
ggaaatttcatcgataagctaagactcttcaccaggggaggatccggtggaatgggttat
cctcgtttaggtggagaaggtggaaaaggtggtgatgtctgggttgtagcccagaacaga
atgactttaaaacaacttaaagacaggtatcctcggaaacggtttgtggctggagtagga
gcaaacagcaaaattagtgcactgaaaggctccaaaggaaaagactgtgaaatccctgtg
cctgtgggtatttcagtaactgatgaaaatggtaaaattataggagaactcaataaagaa
aatgacagaattttggtagctcaaggaggtcttggtggtaaattacttacaaatttctta
ccattgaaaggccagaaacgaataattcaccttgatctaaaacttatagctgatgtaggc
ctagtagggaacattatgggcttaatagggtcttatggacaagactggcagtccagccaa
tcacagttgcattttgcataa

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_4|146_aa
MGKDFMSKTPKAMATKDKIDKWDLIKLKSFCTAKETTIGVNRQPTEWEKMFAIYSSDKGL
ISRIYKVLKQIYKKKTNNPIKKWAKDMNRHFSKEDIYASNKHMKKCSSSLAVKCKSKPQG
DTISHQLEWRSLKSQETTGAGEDVEK

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_4|441_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagacaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcggagtg
aacaggcaacctacagaatgggagaaaatgtttgcaatctactcatctgataaagggcta
atatccagaatctacaaagtactcaagcaaatttacaagaaaaaaacaaacaaccccatc
aaaaagtgggcgaaggatatgaacagacacttctcaaaagaagacatttatgcatccaac
aaacatatgaaaaaatgctcatcatcactggccgtcaaatgcaaatcaaaaccacaagga
gataccatctcacaccagttagaatggcgatccttaaaaagtcaggaaacaacaggtgct
ggagaggatgtggagaaatag

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_5|205_aa
MKQEENFREKRVKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKSENTLQDIIQENFL
NLARQANIQIQEIQRPPQRYSSKRATQRHIIVRFTKVEMKEKMLRAAREKGRVTHKGKLI
TLTADLSAETLKARREWGPIFNILKEKNFQPRISYPAKLRFISEGEIKSFIDKQMLRDFV
NTSPALQELLKEALNMERNNRYQPL

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_5|618_bp
atgaagcaagaagagaattttagagaaaaaagagtaaaacgaaatgaacaaagcctccaa
gaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgat
ggggagaatggaaccaagtcagaaaacactctgcaggatattatccaggagaacttcctc
aacctagcaaggcaggccaacattcaaattcaggaaatacagagaccaccacaaaggtat
tcttcaaaaagagcaactcaaagacacataattgtcagattcaccaaagttgaaatgaag
gaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagctcatc
acactaacagctgatctctcggcagaaactctaaaagccagaagagagtgggggccaata
ttcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaactaaga
ttcataagtgaaggagaaataaaatcctttatagacaagcaaatgctgagagattttgtc
aacaccagccctgccctacaagagctcctgaaggaagcactaaacatggaaaggaacaac
cggtaccagccactgtaa

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_6|335_aa
MGRNQSRKAENSKNQSAYSPPKDCSSSPAMEQNWMENEFDKLTEVDFRSDWENGSKLENT
LQDIIEENFPNLAKTANIQIQEIRRTPQRYSSRRATARHIIVRFTKVEMKKKILRAAREK
EIQITIRQYYKQFYANKLENLEEMDKFLDTYMLPRLKQEEFESLNRPVTGPENEAIINCL
PTKKSPGRGGFTAQFYQSLAEIQQQQQQQKENSRPISLTNINAKILNKILANRTQQHIKK
LIHHDQVGFILGMQGWFNVHKSINLIHHINRSNDKNHMIISIDAEKAFEKIQQRFMLKTL
KTLGINRMYLKILRAIYDKPTANLIRNKKNWKHSL

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_6|1008_bp
atggggagaaaccagagcagaaaagctgaaaattccaaaaaccagagtgcctattctcct
ccaaaggactgcagctcctcgccagcaatggaacaaaactggatggagaatgagtttgac
aaattaacagaagtagacttcagaagtgactgggagaatggatccaagttagaaaacact
cttcaggatattattgaggagaacttccccaacctagcaaagacggccaacattcaaatt
caggaaatacggagaacaccacaaagatactcctcgagaagagcaaccgcaagacacata
attgtcagattcaccaaagttgaaatgaagaaaaaaatattaagggcagccagagagaaa
gaaatacaaattaccatcagacaatactataaacaattctatgcaaataaactagaaaat
ctagaagaaatggataaattcctggacacatacatgctcccaagactaaaacaggaagaa
tttgaatctctgaatagaccagtaacaggtcctgaaaatgaggcaataattaattgctta
ccaaccaaaaaaagtccaggacgaggtggattcacagctcaattctaccagagcctggca
gagatacaacaacaacaacaacaacaaaaagagaattctaggccaatatccctgacgaac
atcaatgcgaaaatcctcaataaaatactggcaaaccgaacccagcagcacatcaaaaag
cttatccaccatgatcaagttggcttcatccttgggatgcaaggctggttcaatgtacac
aaatcaataaacctaatccatcacataaacagaagcaacgacaaaaaccacatgattatc
tcaatagatgcagaaaaggccttcgagaaaattcaacagcgcttcatgctaaaaactctc
aaaacactaggtatcaacagaatgtatctcaaaatattaagggctatttatgacaaaccc
acagccaatctcatacggaataagaaaaactggaagcattccctttga

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_7|204_aa
MNLSLPFIFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQVDISGFQLSS
HTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFL
HLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLW
ISDTMSSTEPPSKHAVTTSKMDII

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_7|615_bp
atgaatttatctttaccttttatattcccaaatgctggaaaatcctctttgctaagttgt
gtttctcatgcaaaacctgcaattgcagattacgcatttacaacattaaagcctgaactt
ggaaagataatgtacagtgatttcaaacaggttgatatttctggatttcagctttcttct
cacactcaatacaggacagcttttgaaaccataatactgcttacaaaagagttggaattg
tacaaagaggaacttcagacaaaacctgcactcttggcagttaataaaatggacttgcca
gatgcccaagataagttccatgaattgatgagccagctccagaatcctaaagattttctg
catttatttgaaaaaaacatgattccagagaggactgtagagttccaacatatcatcccc
atatctgcagttactggagaaggaatcgaagaattaaagaattgtataagaaagtcactg
gatgaacaggccaaccaggaaaatgatgcacttcataagaaacagttgcttaatttgtgg
atttctgatacaatgtcttctactgagccaccatcaaagcatgctgttactacttccaaa
atggatataatttaa

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_8|262_aa
MLPAAGGPVDSGNCSPSHPGHCRSGPRENLTALPEASGVPRWERTSWDAERETLQEAPQC
GRVKCPACEKQYSTSLPAMGCRDVHAATVLSFLCGIASVAGLFAGTLLPNWRKLRLITFN
RNEKNLTVYTGLWVKCARYDGSSDCLMYDTTWYSSVDQLDLRVLQFALPLSMLIAMGALL
LCLIGMCNTAFRSSVPNIKLAKCLVNSAGCHLVAGLLFFLAELKGSSGVLEPSGTGPQEP
VCTSPPNCPTCDIILVAWNWPG

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_8|789_bp
atgttgcctgcggctggcggcccagtggattctgggaattgtagtcccagccatccaggg
cattgccgttcagggccacgggaaaacctgactgcgctcccagaagcctccggtgtacct
cgctgggaacgcacttcctgggacgctgagagggagacgctccaagaggctcctcagtgt
gggcgagtaaaatgccctgcgtgtgagaagcagtactccacaagcttgcctgccatgggc
tgtcgggatgtccacgcagccacagtcctttccttcctgtgtggaatcgcctcagtagca
ggcctctttgcagggactctgcttcccaactggagaaaattacgattgatcacattcaac
agaaacgagaagaacctgactgtttacacaggcctgtgggtgaaatgtgcccggtatgac
gggagcagtgactgcctgatgtacgacactacttggtactcatcagttgaccagctggac
ctgcgtgtcctccagtttgccctacccctcagcatgctgatcgccatgggtgccctgctg
ctctgcctgattggaatgtgcaacactgccttcaggtcctcggtgcccaacatcaaactg
gccaagtgtctggtcaatagtgcaggttgccacctggtggctgggctgctatttttcctg
gcagagctcaaaggtagcagtggagtgctggagccaagtggtactggcccacaagaacca
gtgtgtacatctcctcccaactgcccaacctgtgacatcatattggttgcttggaattgg
ccagggtga

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_9|152_aa
MPVIAPEELPAGQDVEVGGSDADDFDPVYAWANVLSGEIQPDIRRNSPLIFHGLLQPIKV
VLTVWFGFGKLVLQYHSTFRSNKQGISILAATAIRSHENPGKSDSRGNSTLTQDELRNLW
SPLKNENAGSLVQKLRISRHPPQNIKTRAGPF

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_9|459_bp
atgcctgttattgcccctgaagaacttccagcgggacaagatgtagaagttggaggcagt
gatgctgatgatttcgaccctgtgtatgcctgggctaatgtcttatcgggggaaattcag
ccagatatcaggcgaaattcacccctgatatttcacggactacttcagcccatcaaggta
gtacttacagtttggtttgggtttggtaaattggtgctccaatatcactctacctttaga
agtaataaacaaggaatctctattttggctgcaactgcaataagaagccatgagaatcct
ggcaaaagcgatagccgtggcaatagcaccctcacacaggatgagctacgtaatttgtgg
agcccactgaaaaatgaaaatgcaggatcccttgttcaaaaattacgaatttcaagacac
ccaccacagaatattaaaacaagagcagggcccttctga

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_10|122_aa
MVNWKPSEKDIKEDGPACPQLDLTLVIGLAAKRRGRGSPERTPIKIPLLCFPAERSAPRC
KFLDSWRICRVNIRSIHPFTKAIRNVLHSQQQERQYGSTKSPAPKSHGAMQCIQIVLMNA
AR

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_10|369_bp
atggtgaactggaagccaagtgaaaaagatatcaaggaagatggcccagcatgtccccag
ctggatttaaccctagttattggcctagcagccaagagaagaggtcggggttctcctgag
aggacacctattaagatacccttattgtgttttccagcggaaaggtcagccccccgctgc
aagttcttagattcctggaggatctgcagagtcaacattaggagtatccatccattcacc
aaggccatcaggaatgtgctgcacagccaacagcaggaacgtcagtatggcagcaccaaa
tctcctgcccccaagtcccatggagcaatgcaatgtatccagattgtgcttatgaatgca
gccagatga

>gi568815591f:90312677_90513408|GENSCAN_predicted_peptide_11|159_aa
MESRYIVRASLELLASGKKCGPRRALLPPILKNNCLHSGSLRVSLTDYIANLKECVELYS
NTIKSNAHLSEISDLELGAVADSDLGCIHADVDEICSSSNQLVMHSKRKYKPKDQSELRN
VGPVPLKIRGSESILEIPMGKLSERKGKVNGKDSAASAM

>gi568815591f:90312677_90513408|GENSCAN_predicted_CDS_11|480_bp
atggaatctcgctatattgtccgggctagtctcgaactcctggcctcaggaaagaagtgt
ggaccaagaagggcactattaccaccaatcctgaaaaataactgtcttcacagtgggtct
ttgagagttagtttaactgattatatagctaacttgaaggagtgtgtggagctgtattca
aacaccatcaagagtaatgcacatctctcagagatttcagacttagagctgggggcagta
gctgatagtgaccttggctgtattcatgcagatgttgatgaaatatgctcaagcagcaat
cagctagtaatgcacagcaaacgaaaatataaaccaaaggaccaatcagagttgcggaat
gtgggtccagtgccgttaaaaataagagggtccgaaagtatccttgaaatacccatggga
aagttgagtgaaagaaaaggcaaggtgaatggtaaagattctgctgcctcagctatgtga