GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:29:12

Sequence gi568815594f:102769085_102987427 : 218343 bp : 37.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4610   4742  133  2  1   59   59   124 0.117   6.33
 1.02 Intr +  10157  10261  105  1  0   35   87    62 0.007   0.29
 1.03 Intr +  57419  57963  545  1  2   71   86   157 0.144   4.56
 1.04 Intr +  58398  58563  166  0  1   63   48   108 0.164   3.34
 1.05 Intr +  91927  92124  198  0  0  122   45    30 0.274   0.73
 1.06 Intr +  95291  95410  120  1  0   52   47   117 0.419   3.77
 1.07 Intr +  99711  99815  105  2  0   54   56   193 0.759  12.19
 1.08 Intr +  99896 100103  208  1  1   78   89   217 0.399  18.53
 1.09 Intr + 116138 116346  209  0  2   46  107    94 0.605   4.97
 1.10 Term + 128963 129157  195  1  0   37   41   198 0.270   6.43
 1.11 PlyA + 129257 129262    6                               1.05

 2.00 Prom + 142317 142356   40                              -6.15
 2.01 Init + 144329 144385   57  1  0   56  103    38 0.581   3.46
 2.02 Term + 151427 151759  333  1  0   66   54   313 0.266  19.33
 2.03 PlyA + 152248 152253    6                               1.05

 3.00 Prom + 152782 152821   40                              -6.15
 3.01 Sngl + 154701 155609  909  2  0   60   32   283 0.760  15.91
 3.02 PlyA + 155628 155633    6                              -0.45

 4.00 Prom + 155999 156038   40                              -3.65
 4.01 Sngl + 156738 157670  933  2  0   43   39   336 0.955  20.40
 4.02 PlyA + 157931 157936    6                               1.05

 5.06 PlyA - 158702 158697    6                               1.05
 5.05 Term - 159448 159310  139  0  1   35   50   164 0.896   3.75
 5.04 Intr - 160175 160073  103  0  1   73   97    39 0.920   1.61
 5.03 Intr - 163204 163040  165  2  0   71   97   101 0.597   8.31
 5.02 Intr - 167027 166852  176  1  2   97   85    96 0.586   8.86
 5.01 Init - 169069 168990   80  1  2   45   65    21 0.643  -3.74
 5.00 Prom - 170476 170437   40                              -8.25

 6.00 Prom + 171923 171962   40                              -0.95
 6.01 Sngl + 172025 172357  333  1  0   45   50   155 0.843   3.17
 6.02 PlyA + 172745 172750    6                               1.05

 7.02 PlyA - 174304 174299    6                               1.05
 7.01 Sngl - 185325 183577 1749  0  0   37   39   655 0.952  49.98
 7.00 Prom - 189187 189148   40                              -7.75

 8.00 Prom + 190216 190255   40                              -4.95
 8.01 Sngl + 193387 193968  582  0  0   25   47   307 0.755  16.23
 8.02 PlyA + 194659 194664    6                               1.05

 9.00 Prom + 196134 196173   40                              -6.25
 9.01 Sngl + 200439 200741  303  2  0   88   54   330 0.985  25.18
 9.02 PlyA + 201325 201330    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  36923  36756  168  2  0   56   53   166 0.885   4.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:102769085_102987427|GENSCAN_predicted_peptide_1|661_aa
XKLTIKQSQAGPSGGIPEEGIVITGDDSSRCVIALEDLTVEQDVESPTFSCFSARCSATC
VALPAEVFYGHRIGAWQAKKRHSVCLSSGSSLSRCMLKGPAKTLDYPGGGAGLSRLTPAL
PDTGAFCKNGADQHSHRPRRAPDESRSLKTAAIRGGWGGVAKPPTASVPCFRPEVGARVT
GRAEVVATSLTSRPLERKRPGWERKRRRRKGWVRGRVRSPAEEEPGPSRRYTGVTRAKKG
KGGGGSIRLRTDAGLLSVSVQSWCLPGPTGLTRTTQPQDVRSDGTTASCHAPPLPLLLPL
HRRGSVRQRRRPEHKTDIFLDYSSVKSPSVFWIGKNRSEPFGRQHARLGKLGTHLTLTFL
PGRTHGPKGPLLALNSAALEEKDEWADRAEKDRVSKLNQRMFSGSKNVPECEIVVTSKIA
EFKHLQTLKAQEEGHLHTRFRGGPRYPPVPAPRQSAASAEAASARRPLPLPAQARQLGQS
GGGSGEEWTPLARMVLESVARIVKVQLPAYLKRLPVPESITGFARLTEWLRLLPFLGVLA
LLGYLAVRPFLPKKKQQKDSLINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTPCP
SRAGKIIGMLLEIGYLELLHMLESPEPRCTKVDKGIAVPQDHQAKEAAQKAVNGATGVPI
I

>gi568815594f:102769085_102987427|GENSCAN_predicted_CDS_1|1986_bp
nnaaagttaactataaaacagtctcaggcaggtccttcaggaggtattccagaagaaggc
attgttatcacaggagatgacagctccaggtgtgttattgcacttgaagaccttacagtg
gaacaagatgtggagtctccaacgttcagttgcttctctgctcgctgctcagccacttgt
gttgctctgccagctgaagtcttctatgggcacaggataggagcatggcaggccaaaaag
cgccatagtgtgtgcttgtcgtctggctcctcactctctcggtgtatgctcaaaggtccg
gccaaaactcttgattatcccggcggcggggcaggattgtctcgtctcacaccagctctg
ccagacacaggcgccttttgcaaaaacggagcagatcagcactcgcacaggccccgaaga
gcccctgatgaatccaggtcccttaagacagccgcgatccggggtgggtggggtggcgtg
gcaaagccaccaacagcctctgtaccgtgctttcggcccgaagtgggggcgagggtgacg
ggaagagcggaggtggtggctacaagtttaacttcccggcctctagaaaggaagagaccc
gggtgggagaggaagaggcgtaggagaaaggggtgggtgcggggcagggtccggagccca
gcagaggaggagccggggcctagtcggcgctataccggcgtcactagggcaaagaaaggc
aaggggggagggggaagcataagactccggacggacgccgggctgctttcggtttctgtc
caaagctggtgcctccccggccctacggggctcacgcgcacgacacagccacaagatgtc
cgctctgacggaactactgccagctgccacgctccgcccctccccctcctcctgcctctt
caccgccgcggatcagtccgccaacgccgccgtcccgagcacaagaccgatatattccta
gactattcatctgtgaagagtccctcagtattctggatagggaaaaacagaagtgagcct
tttgggcggcaacacgcaaggctagggaagctgggcactcacttgactcttactttcctt
cctgggagaactcatgggccaaaagggcctctcttggcactgaactctgctgccttggag
gagaaggatgaatgggctgacagagcagaaaaagacagggtttcaaaactaaatcaaagg
atgtttagtggcagtaaaaatgtaccagaatgtgagattgtggtcaccagtaaaattgct
gaatttaagcatctacagacgttaaaggcccaagaggagggccaccttcacacgagattc
cgaggagggcctcgctacccgccagttcccgcgcctcggcagtccgccgcgagcgccgag
gccgccagtgcccgccggccgcttccgctcccggcgcaggcgcggcagcttggccagagc
ggagggggctcgggagaggagtggacgccgctggccaggatggtgctggagagcgtggcc
cgtatcgtgaaggtgcagctccctgcatatctgaagcggctcccagtccctgaaagcatt
accgggttcgctaggctcacagaatggcttcggttattgcctttccttggtgtactcgca
cttcttggctaccttgcagttcgtccattcctcccgaagaagaaacaacagaaggatagc
ttgattaatcttaaaatacaaaaggaaaatccgaaagtagtgaatgaaataaacattgaa
gatttgtgtcttactaaagcagcttattgtaggtgttggcgttctaaaacgccatgccct
agtcgtgctggtaaaatcattggcatgttgttggagattggttatttagaacttcttcat
atgcttgaatctccagagcctcgctgtactaaggttgacaaaggtatagctgtaccacaa
gaccaccaagctaaagaggctgcccagaaagcagttaatggtgccactggtgttccaatt
atttaa

>gi568815594f:102769085_102987427|GENSCAN_predicted_peptide_2|129_aa
MHSQKRFERLLEPIAMLIQDRSSLSAMEQSWMENDFDELTEVGFRRLVITNFSELKEDVG
THRKEGKNLEKRLDEWLTRINSVEKTLSDLMELKTLARELCDTCTSFNSRFNQVEERVSV
IEDQINEIK

>gi568815594f:102769085_102987427|GENSCAN_predicted_CDS_2|390_bp
atgcattcccagaaaaggtttgagaggctgctagaacctatagccatgctgattcaggat
cgcagctccttgtcagcaatggaacaaagctggatggagaatgactttgacgagttgaca
gaagtaggcttcagaaggttggtaataacaaacttctccgagctaaaggaggatgttgga
acccatcgcaaggaaggtaaaaaccttgaaaaaagattagatgaatggcttacaagaata
aacagtgtagagaagaccttaagtgacctgatggagctgaaaaccttggcacgagaactt
tgtgacacatgcacaagcttcaatagccgattcaatcaagtggaagaaagggtatcagtg
attgaagatcaaataaatgaaataaagtga

>gi568815594f:102769085_102987427|GENSCAN_predicted_peptide_3|302_aa
MSELPFTIASKRIKYLGIQLTREMKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIV
KMAILPKVIYRFNAIPIKLPMTFFTELEKTTFKFIWNQKRTCIAKTVLSQKNKAGGITLP
DFKLHYKATVTKTAWYWCQSRDIDQWNRIEPSEIIRHIYNHLIFDKPDINEKWGKDSLFN
KWCWENGLAIRRKLKLDPFLTLYIKINSRWIKDLHVRPKTIKTLEEYLGNTIQAIGMGKE
LMTKTPIAMATKAKIDKWDLIKLESFCTAKETTIRVNRQPTEWEKIFTIYPSDKGLISRI
YK

>gi568815594f:102769085_102987427|GENSCAN_predicted_CDS_3|909_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggaaatgaaggacctcttcaaggagaactacaaaccacttctcaacgaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaatattgtg
aaaatggccatattgccaaaggtaatttatagattcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttcaagttcatatggaaccaaaaaaga
acctgcattgccaagacagtcttaagccaaaagaacaaagctggaggcatcacactacct
gacttcaaactacactacaaggctacagtaaccaaaacagcatggtactggtgccaaagc
agagatatagaccaatggaacagaatagagccctcagaaataatacgacacatctacaac
catctgatctttgacaaacctgacataaacgagaaatggggaaaggattccctatttaat
aaatggtgctgggaaaacgggctagcaatacgtagaaaactgaaactggatcccttcctt
acactttatataaaaattaattcaagatggattaaagacttacatgttagacctaaaacc
ataaaaaccctagaagaatacctaggcaataccattcaggccataggcatgggcaaagaa
ttaatgactaaaacaccaatagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactagagagcttctgcacagcaaaagaaactaccatcagagtgaacagacaacct
acagaatgggagaaaatttttacaatctacccatctgacaaagggctaatatccagaatc
tacaaataa

>gi568815594f:102769085_102987427|GENSCAN_predicted_peptide_4|310_aa
MNIDAKILNKILANRIQQHIKKLIHHDQVGFISGMQGWFNICNSINIIHYINRTKDKNHM
IISIDAEKAFDKIQHSFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFLLKT
GTRQGCPLSPLLFNMVLEVLTSAIRQEKEINGIQLGKEEVKLSLFADDMIVYLENPIISA
QNLLKLISNFSKVSGYKINVQKSQAFLYTINRQTESQIMSELPFTIATKRIKYLGIQLTR
VVKDLFKENYKPLLNEIKEDTNKLKNIPCSWIGRINIMEMAILPEVIYRFNTIPIKLLMT
FFTELEKKLL

>gi568815594f:102769085_102987427|GENSCAN_predicted_CDS_4|933_bp
atgaacatcgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccacgatcaagtcggcttcatctctgggatgcaaggctggttcaac
atatgtaactcaataaacataatccattacataaacagaaccaaagacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacactccttcatgctaaaa
actctcaataaactaggtattgatgggacgtatctcaaaataataagagctatttatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccttttgaaaacc
ggcacaagacaaggatgccctctctcaccactcctattcaacatggtgttggaagttctg
accagtgcaatcaggcaggagaaagaaataaatggtattcagttaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgattgtatatttagaaaaccccatcatctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcctatacaccattaatagacaaacagagagccaaatcatgagt
gaactcccattcacaattgctacaaagagaataaaatacctaggaatccaacttacaagg
gttgtgaaggacctcttcaaggagaactacaaaccactgctcaacgaaataaaagaggac
acaaacaaattgaagaatattccatgctcatggataggaagaatcaatatcatggaaatg
gccatactgcccgaagtaatttatagattcaatactatccccatcaagctactaatgact
ttcttcacagaattggaaaaaaaactgctttaa

>gi568815594f:102769085_102987427|GENSCAN_predicted_peptide_5|220_aa
MGIVAYELGLLTADTVGLCFFIQLAILAGTIPTDLLSGPSVLSTEVFPVHWQQHSDGVCQ
PECFIVVIVARSLLTHMCQQQQHTAGAVSPAVVVPYMMVLQENGYGVEEGIPTLLMAASS
MDDILAITGFNTCLSIVFSSENRETRSNGACSQGACILKKNYKWDEYYIVKINIKGWNSW
EDSEEDQKMWESLELPRDLLNGFDRTADSDLDSEVQAEEV

>gi568815594f:102769085_102987427|GENSCAN_predicted_CDS_5|663_bp
atgggtatcgttgcatatgagctgggtctcttgacagcagatacagttgggctttgcttc
tttatccaacttgccattctggctggtaccatacccacagatttgttgtctggcccttca
gtgttaagcactgaggtgttcccagtccactggcaacaacactctgatggggtgtgccag
ccagagtgcttcattgtagtgattgtagcaaggtccctactcacacatatgtgccagcag
cagcagcacacagcaggtgctgtctctcctgctgttgttgtcccttacatgatggtgctg
caagaaaatggatatggtgttgaggaaggcattccaaccttattaatggctgctagcagt
atggatgacattctggctatcactggattcaatacatgcttgagcatagtcttttcctca
gaaaacagagagacaagatcaaatggtgcatgttctcaaggagcttgtatattaaagaaa
aattacaaatgggatgaatattacattgtgaagattaatattaaagggtggaacagttgg
gaggactcagaagaagaccagaagatgtgggaaagtttggaactgcctagagacttgttg
aatggctttgaccgaactgctgatagtgacttggacagtgaagtccaggctgaggaggtc
tga

>gi568815594f:102769085_102987427|GENSCAN_predicted_peptide_6|110_aa
MKTPKTIATKTKIDKWDLIKLKGFCTAKEIINKPPMEWEKIFANHAFDKSLISRIQKELR
KINKQKPNNPIKWAKERTRHFSKEDKHVVNKYMEKYSTSLTLEKCKTKLQ

>gi568815594f:102769085_102987427|GENSCAN_predicted_CDS_6|333_bp
atgaagacgccaaaaacaattgcaacaaaaacaaaaattgacaaatgggatctaattaaa
ctaaagggcttctgcacagcaaaggaaatcatcaacaaaccacctatggaatgggagaaa
atatttgcaaaccatgcattcgacaaaagtctaatatccagaatccaaaaagaacttaga
aaaatcaacaagcaaaaacctaacaaccccattaaatgggcaaaggagaggaccagacac
ttctcaaaagaagacaaacacgtagtcaacaagtatatggaaaaatattcaacatcacta
acattagagaaatgcaaaacaaaactgcagtga

>gi568815594f:102769085_102987427|GENSCAN_predicted_peptide_7|582_aa
MNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHM
IISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLKT
STRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSA
QNLLKLISNFSKVSGYEINVQKSQAFLYTNNRQTESQIMGELPFTIASKRIKYLGIQLTR
DVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMT
FFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRD
IDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTP
YTKINSRWIKDLNVKPKTIKTLEENLGITIQDIGVGKDFMSKTPKAMATKDKIDKWDLIK
LKSFCTAKETTIRVNRQPTTWEKIFATYSSDKGLISRIYNELKQIYKKKTNNPIKKWAKD
MNRHFSKEDIYAAKKTHEEMLIITGHQRNANQNHYEISSHTS

>gi568815594f:102769085_102987427|GENSCAN_predicted_CDS_7|1749_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaat
atacgcaaatcaataaatgtaatccagcatataaacagagccaaagacaaaaaccacatg
attatctcaatagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaa
actctcaataaattaggtattgatgggacgtatttcaaaataataagagctatctatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaacc
agcacaagacagggatgccctctctcaccgctcctattcaacatagtgttggaagttctg
gccagggcaatcaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagacgacatgattgtttatctagaaaaccccatcgtctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacgaaatcaatgta
caaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatgggt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggac
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatg
gccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgc
attgccaagtcaatcctaagccaaaagaataaagctggaggcatcacactacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagat
atagatcaatggaacagaacagagccctcagaaataatgccgcatatctacaactatctg
atctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatgg
tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacacct
tatacaaaaatcaattcaagatggattaaagatttaaacgttaaacctaaaaccataaaa
accctagaagaaaacctaggcattaccattcaggacataggcgtgggcaaggacttcatg
tccaaaacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaattaaa
ctaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaca
tgggagaaaattttcgcaacctactcatctgacaaaggactaatatccagaatctacaat
gaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaaggac
atgaacagacacttctcaaaagaagacatttatgcagccaaaaaaacacatgaagaaatg
ctcatcatcactggccatcagagaaatgcaaatcaaaaccactatgagatatcatctcac
accagttag

>gi568815594f:102769085_102987427|GENSCAN_predicted_peptide_8|193_aa
MFELFNVPGFYIAVQEVLALAVSWTSQQVGECMLMSIVIDKGDGVTHVLPVVEGYVIGSC
INHILIVGDTVYFTQQLLREREVGIPLEQSLETTKAIKEKYCYICPDTVKEFAKHDVDSW
KWIKQYTGINVINQEKFIIDVGYKRFLQPEIFFYPEFANPDFMESILNVVDEYKTVPLMC
MVHCIRMLFFQGV

>gi568815594f:102769085_102987427|GENSCAN_predicted_CDS_8|582_bp
atgtttgaattatttaatgtaccaggattctacattgcagttcaggaggtactggccttg
gcagtatcttggacatctcaacaagtgggtgaatgtatgttaatgagtatagtcattgac
aaaggagatggagtcacccatgttctcccagttgtagaaggttatgtaattgggagctgc
atcaatcacatcctgattgtaggtgatactgtgtatttcactcaacagctgctaagggag
agggaggtaggaatccctcttgagcagtcactggagaccacaaaagccattaaggagaaa
tactgttacatttgccctgatacagtcaaggaatttgctaagcatgatgtggattcctgg
aagtggatcaaacaatacacaggtatcaatgtgatcaaccaggagaagttcataatagat
gttggttacaaaaggttcctgcaacctgaaatatttttttacccagagtttgccaaccca
gactttatggaatccatcttgaatgttgttgatgaatacaaaactgtcccattgatgtgc
atggtccactgtataagaatgttgttctttcaaggggtttga

>gi568815594f:102769085_102987427|GENSCAN_predicted_peptide_9|100_aa
MGGNKSRQAENSKNQSASSPPKDRSSSPAMEQSWMENDFDELTEVGFRRSVITNFSEPKE
DVRTHCKEAKNLEQRLDEWLTRINNIEKTFNDLMELKTMA

>gi568815594f:102769085_102987427|GENSCAN_predicted_CDS_9|303_bp
atggggggaaacaagagcagacaagctgaaaattcaaaaaaccagagtgcctcttctcct
ccaaaggatcggagctcctcgccagcaatggaacaaagctggatggagaatgactttgac
gagttgacagaagtaggctttagaaggtcagtaataacaaacttctccgagccaaaggag
gatgttcgaacccattgcaaggaagctaaaaaccttgaacaacgattagatgaatggcta
actagaataaacaacatagagaagacctttaatgacctgatggagctgaaaaccatggca
tga