Result of FASTA (ccds) for pF1KE0137
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0137, 172 aa
  1>>>pF1KE0137 172 - 172 aa - 172 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.2514+/-0.000944; mu= 9.4718+/- 0.057
 mean_var=120.6108+/-24.312, 0's: 0 Z-trim(109.2): 120  B-trim: 4 in 1/50
 Lambda= 0.116783
 statistics sampled from 10587 (10714) to 10587 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.329), width:  16
 Scan time:  1.920

The best scores are:                                      opt bits E(32554)
CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX          ( 172) 1087 193.4 5.8e-50
CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18         ( 172)  961 172.2 1.4e-43
CCDS4066.1 CETN3 gene_id:1070|Hs108|chr5           ( 167)  601 111.5 2.5e-25
CCDS75274.1 CETN3 gene_id:1070|Hs108|chr5          ( 191)  570 106.3   1e-23
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14           ( 149)  496 93.8 4.9e-20
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2            ( 149)  496 93.8 4.9e-20
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19          ( 149)  496 93.8 4.9e-20
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10          ( 149)  478 90.8   4e-19
CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20         ( 160)  402 78.0   3e-15
CCDS78036.1 CETN3 gene_id:1070|Hs108|chr5          ( 153)  375 73.4 6.8e-14
CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3           ( 161)  365 71.7 2.3e-13
CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10        ( 146)  352 69.5 9.7e-13
CCDS81255.1 CALML6 gene_id:163688|Hs108|chr1       ( 164)  314 63.2 8.9e-11


>>CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX               (172 aa)
 initn: 1087 init1: 1087 opt: 1087  Z-score: 1010.5  bits: 193.4 E(32554): 5.8e-50
Smith-Waterman score: 1087; 100.0% identity (100.0% similar) in 172 aa overlap (1-172:1-172)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
               70        80        90       100       110       120

              130       140       150       160       170  
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
              130       140       150       160       170  

>>CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18              (172 aa)
 initn: 961 init1: 961 opt: 961  Z-score: 895.8  bits: 172.2 E(32554): 1.4e-43
Smith-Waterman score: 961; 83.7% identity (98.8% similar) in 172 aa overlap (1-172:1-172)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
       :::.::: . ::..:.....:::::::.::::.::::::::.::.::::.::::::::::
CCDS11 MASGFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
       ::::.:::.::::::.:.:::::..:.:::.:::::::::::::::::::.:::::::::
CCDS11 GFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGK
               70        80        90       100       110       120

              130       140       150       160       170  
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
       ::::::::::.::::::::::::::::::::::::::.:.::::::::::::
CCDS11 ISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY
              130       140       150       160       170  

>>CCDS4066.1 CETN3 gene_id:1070|Hs108|chr5                (167 aa)
 initn: 595 init1: 595 opt: 601  Z-score: 568.2  bits: 111.5 E(32554): 2.5e-25
Smith-Waterman score: 601; 54.2% identity (84.9% similar) in 166 aa overlap (1-166:1-163)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
       :.  ...  ......::.   . ::.:::::::..::.:::.:   .:: .:::::::::
CCDS40 MSLALRSELVVDKTKRKK---RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRAL
               10           20        30        40        50       

               70        80        90       100       110       120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
       ::. :: .. :.... :.:.:::..: ::  :.:. . :.: .:::::::::::::..::
CCDS40 GFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGK
        60        70        80        90       100       110       

              130       140       150       160       170  
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
       ::..::.:::.:::::..::::. ::.: :.:::::....::. ::      
CCDS40 ISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTGDI  
       120       130       140       150       160         

>>CCDS75274.1 CETN3 gene_id:1070|Hs108|chr5               (191 aa)
 initn: 667 init1: 562 opt: 570  Z-score: 539.2  bits: 106.3 E(32554): 1e-23
Smith-Waterman score: 570; 54.8% identity (84.7% similar) in 157 aa overlap (1-157:1-154)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
       :.  ...  ......::.   . ::.:::::::..::.:::.:   .:: .:::::::::
CCDS75 MSLALRSELVVDKTKRKK---RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRAL
               10           20        30        40        50       

               70        80        90       100       110       120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
       ::. :: .. :.... :.:.:::..: ::  :.:. . :.: .:::::::::::::..::
CCDS75 GFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGK
        60        70        80        90       100       110       

              130       140       150       160       170          
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY        
       ::..::.:::.:::::..::::. ::.: :.:::::.                       
CCDS75 ISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEILKNILLLPIWSRCLSLNREFFSE
       120       130       140       150       160       170       

CCDS75 VNQEEFIAIMTGDI
       180       190 

>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14                (149 aa)
 initn: 797 init1: 494 opt: 496  Z-score: 473.2  bits: 93.8 E(32554): 4.9e-20
Smith-Waterman score: 496; 52.4% identity (82.5% similar) in 143 aa overlap (24-166:4-146)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
                              .:::::  :..:::.::: :: ::: .::: ..::.:
CCDS98                     MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
                                   10        20        30        40

               70        80        90       100       110       120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
       : .: . :.. ::.:.: .:.: ..: .:::.:..::.. :..::: .::..:: : .: 
CCDS98 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
               50        60        70        80        90       100

              130       140       150       160       170  
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
       ::  .:..:  .:::.:::::..::: ::: ::::.:. .::...:      
CCDS98 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK   
              110       120       130       140            

>>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2                 (149 aa)
 initn: 797 init1: 494 opt: 496  Z-score: 473.2  bits: 93.8 E(32554): 4.9e-20
Smith-Waterman score: 496; 52.4% identity (82.5% similar) in 143 aa overlap (24-166:4-146)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
                              .:::::  :..:::.::: :: ::: .::: ..::.:
CCDS18                     MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
                                   10        20        30        40

               70        80        90       100       110       120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
       : .: . :.. ::.:.: .:.: ..: .:::.:..::.. :..::: .::..:: : .: 
CCDS18 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
               50        60        70        80        90       100

              130       140       150       160       170  
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
       ::  .:..:  .:::.:::::..::: ::: ::::.:. .::...:      
CCDS18 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK   
              110       120       130       140            

>>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19               (149 aa)
 initn: 797 init1: 494 opt: 496  Z-score: 473.2  bits: 93.8 E(32554): 4.9e-20
Smith-Waterman score: 496; 52.4% identity (82.5% similar) in 143 aa overlap (24-166:4-146)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
                              .:::::  :..:::.::: :: ::: .::: ..::.:
CCDS33                     MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
                                   10        20        30        40

               70        80        90       100       110       120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
       : .: . :.. ::.:.: .:.: ..: .:::.:..::.. :..::: .::..:: : .: 
CCDS33 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
               50        60        70        80        90       100

              130       140       150       160       170  
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
       ::  .:..:  .:::.:::::..::: ::: ::::.:. .::...:      
CCDS33 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK   
              110       120       130       140            

>>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10               (149 aa)
 initn: 738 init1: 476 opt: 478  Z-score: 456.8  bits: 90.8 E(32554): 4e-19
Smith-Waterman score: 478; 49.0% identity (81.1% similar) in 143 aa overlap (24-166:4-146)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
                              .:::::  :..:::.::: :: : : ..:: ..::.:
CCDS70                     MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSL
                                   10        20        30        40

               70        80        90       100       110       120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
       : .: . :.. :.::::..:.: ..: .:: .:..::.. :..::: .::..:: : .: 
CCDS70 GQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGF
               50        60        70        80        90       100

              130       140       150       160       170  
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
       .:  .:..:  .:::.:.:::..:::  :: ::::.:. .::.:..      
CCDS70 VSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK   
              110       120       130       140            

>>CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20              (160 aa)
 initn: 552 init1: 247 opt: 402  Z-score: 387.2  bits: 78.0 E(32554): 3e-15
Smith-Waterman score: 402; 39.7% identity (76.7% similar) in 146 aa overlap (25-167:12-157)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
                               :.::.  :.. :::.::::: : :.:::: ..:: :
CCDS13              MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRML
                            10        20        30        40       

               70        80        90       100          110       
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEK---DTKEEILKAFKLFDDDE
       :  : :::.  .: :.:..:.: ..: .::..:...:.:     ..::. . :..:: . 
CCDS13 GQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNA
        50        60        70        80        90       100       

       120       130       140       150       160       170  
pF1KE0 TGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
        : :. ..: .. .  ::..::::.. .. ..:...::... .:::..:.     
CCDS13 DGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ  
       110       120       130       140       150       160  

>>CCDS78036.1 CETN3 gene_id:1070|Hs108|chr5               (153 aa)
 initn: 395 init1: 367 opt: 375  Z-score: 362.9  bits: 73.4 E(32554): 6.8e-14
Smith-Waterman score: 375; 50.0% identity (81.4% similar) in 118 aa overlap (1-118:1-115)

               10        20        30        40        50        60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
       :.  ...  ......::.   . ::.:::::::..::.:::.:   .:: .:::::::::
CCDS78 MSLALRSELVVDKTKRKK---RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRAL
               10           20        30        40        50       

               70        80        90       100       110       120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
       ::. :: .. :.... :.:.:::..: ::  :.:. . :.: .:::::::::::::..  
CCDS78 GFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSVL
        60        70        80        90       100       110       

              130       140       150       160       170  
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
                                                           
CCDS78 KNILLLPIWSRCLSLNREFFSEVNQEEFIAIMTGDI                
       120       130       140       150                   




172 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 01:03:23 2016 done: Fri Nov  4 01:03:23 2016
 Total Scan time:  1.920 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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