GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:16:21

Sequence gi568815591r:21802978_22016897 : 213920 bp : 40.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4730   4831  102  1  0   59   86    89 0.540   6.09
 1.02 Intr +   4902   5072  171  2  0   49  115   200 0.927  18.02
 1.03 Intr +  13490  13725  236  1  2   23   75   250 0.633  12.76
 1.04 Intr +  15240  15362  123  0  0   19  106   146 0.843   8.28
 1.05 Intr +  32520  32786  267  0  0   39  108    82 0.130   1.02
 1.06 Intr +  39567  39771  205  0  1   82   93   268 0.979  24.98
 1.07 Intr +  49490  49654  165  1  0   48   97   100 0.966   6.14
 1.08 Intr +  51338  51478  141  1  0   80   90    74 0.973   6.43
 1.09 Intr +  58876  59046  171  0  0   47  110   189 0.823  16.22
 1.10 Intr +  61558  61680  123  0  0   65   95    37 0.794   1.96
 1.11 Intr +  63493  63686  194  0  2   63   75   278 0.941  21.37
 1.12 Intr +  64882  65030  149  1  2   81   97   145 0.999  13.66
 1.13 Intr +  65887  66014  128  2  2  109   89    95 0.995  11.18
 1.14 Intr +  70297  70524  228  0  0   61  110   149 0.414  11.54
 1.15 Intr +  77725  77916  192  0  0  116  106    21 0.964   5.47
 1.16 Intr +  81314  81433  120  1  0  108   99   146 0.999  17.47
 1.17 Intr +  89448  89690  243  2  0   61   75   284 0.932  21.17
 1.18 Intr +  91646  91828  183  1  0   23  121   124 0.977   8.26
 1.19 Intr +  91907  92022  116  1  2   35   91    95 0.995   2.83
 1.20 Intr +  96359  96471  113  2  2   51   95   180 0.980  14.10
 1.21 Intr +  96871  97143  273  2  0   57   90   156 0.469   9.29
 1.22 Term +  98030  98277  248  0  2   60   45   225 0.975  10.37
 1.23 PlyA +  98835  98840    6                               1.05

 2.12 PlyA -  98864  98859    6                              -1.75
 2.11 Term -  99375  99345   31  2  1   80   48    43 0.732  -4.15
 2.10 Intr - 100137 100001  137  0  2   62  107    89 0.725   6.65
 2.09 Intr - 101282 101133  150  2  0  112   74   209 0.935  21.34
 2.08 Intr - 102654 102529  126  0  0   67   63   167 0.990  12.06
 2.07 Intr - 103479 103312  168  0  0   72   20   107 0.740   1.52
 2.06 Intr - 105530 105153  378  2  0   86   77   445 0.883  37.44
 2.05 Intr - 108774 108571  204  0  0   71   63   164 0.696  10.67
 2.04 Intr - 108929 108829  101  0  2   26   51    78 0.453  -3.19
 2.03 Intr - 112208 112079  130  2  1  101   65    50 0.514   3.35
 2.02 Intr - 113917 113777  141  1  0   62   80   204 0.601  16.63
 2.01 Init - 118034 117954   81  2  0   48   81     7 0.303  -2.98
 2.00 Prom - 120635 120596   40                              -7.75

 3.00 Prom + 121001 121040   40                              -5.05
 3.01 Sngl + 125364 125831  468  2  0   78   48   363 0.879  27.18
 3.02 PlyA + 126249 126254    6                               1.05

 4.00 Prom + 126800 126839   40                              -7.05
 4.01 Init + 127176 127244   69  2  0   70   55    81 0.057   4.10
 4.02 Intr + 142648 142767  120  0  0   54   65   110 0.138   5.07
 4.03 Term + 146025 146150  126  2  0   85   43    88 0.192   1.30
 4.04 PlyA + 146697 146702    6                               1.05

 5.06 PlyA - 147066 147061    6                               1.05
 5.05 Term - 160800 160553  248  1  2   63   40   133 0.191   0.97
 5.04 Intr - 165972 165816  157  0  1   43   64   123 0.438   4.06
 5.03 Intr - 183291 183160  132  0  0   18   36   137 0.021   1.42
 5.02 Intr - 185681 185508  174  2  0    6   91   135 0.047   4.81
 5.01 Init - 206939 206871   69  2  0   11   93   102 0.443   4.10

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:21802978_22016897|GENSCAN_predicted_peptide_1|1296_aa
MMDFKHMKDYNSHTNPLHSVPYSDCVEGRKPCHKSEKIRWGQSIKSFEAQEKTLCGDVLL
TAAFVSYVGPFTRQYRQELVHCKWVPFLQQKVSIPLTEGLDLISMLTDDATIAAWNNEGL
PSDRMSTENAAILTHCERWPLVIDPQQQGIKWIKNKYGMDLKVTHLGQKGFLNAIETALA
FGDVILIENLEETIDPVLDPLLGRNTIKKGKIKGKKHTIISINTENSFDKIQDPFMRKIL
NKLCIEGTYLKTIKAIYDKPTANILNREKLKAFPVKSETRQGFSLPPLLFSTILEVLGSK
YIRIGDKECEFNKNFRLILHTKLANPHYKPELQAQTTLLNFTVTEDGLEAQLLAEVVSIE
RPDLEKLKLVLTKHQNDFKIELKYLEDDLLLRLSAAEGSFLDDTKLVERLEATKTTVAEI
EHKVIEAKENERKINEARECYRPVAARASLLYFVINDLQKINPLYQFSLKAFNVLFHRAI
EQADKVEDMQGRISILMESITHAVFLYTSQALFEKDKLTFLSQMAFQILLRKKEIDPLEL
DFLLRFTVEHTHLSPVDFLTSQSWSAIKAIAVMEEFRGIDRDVEGSAKQWRKWVESECPE
KEKLPQEWKKKSLIQKLILLRAMRPDRMTYALRNFVEEKLGAKYVERTRLDLVKAFEESS
PATPIFFILSPGVDALKDLEILGKRLGFTIDSGKFHNVSLGQGQETVAEVALEKASKGGH
WVILQNVHLVAKWLGTLEKLLERFSQGSHRDYRVFMSAESAPTPDEHIIPQGLLENSIKI
TNEPPTGMLANLHAALYNFDQDTLEICSKEQEFKSILFSLCYFHACVAGRLRFGPQGWSR
SYPFNPGDLTICASVLYNYLEANSKVPWEDLRYLFGEIMYGGHITDDWDRKLCRVYLEEF
MNPSLTEDELMLAPGFAAPPYLDYAGYHQYIEEMLPPESPALYGLHPNAEIEFLTVTSNT
LFRTLLEMQPRNALSGDELGQSTEEKVKNVLDDILEKLPEEFNMAEIMQKNSNRSPYVLV
CFQECERMNILIREIRISLEQLDLSLKGELALSPAVEAQQFALSYDTVPDTWSKLAYPST
YGLAQWFNDLLLRCRELDTWTQDLTLPAVVWLSGFFNPQSFLTAQPCANAQEPKTPYGTK
GCLNLLVAPGNLTCNTFILFNFCYISKAIMQTMARKNEWPLDKTRLTADVTKKTKEDYGH
PPREGAYLHGLFMEGARWDTQAGTIVEARLKELACPMPVIFAKATPVDRQETKQTYECPV
YRTKLRGPSYIWTFRLKSEEKTAKWVLAGVALLLEA

>gi568815591r:21802978_22016897|GENSCAN_predicted_CDS_1|3891_bp
atgatggatttcaaacacatgaaagattataacagtcacaccaacccgttacactctgtt
ccttatagtgactgtgtggaaggacgtaaaccttgccataagtcagagaagattcgctgg
ggtcaatccattaagtcctttgaagctcaagagaagacactctgtggagatgttcttctc
acggcggcatttgtgtcttacgtcggacccttcacaaggcagtatcgccaggagctggtg
cactgcaagtgggttccctttcttcaacagaaggtttccattccactaaccgaaggcctg
gacttgatatccatgttgacggatgatgctacaattgccgcctggaataacgaaggactg
cccagtgacagaatgtccaccgaaaatgccgctatcctaacacactgtgagcgctggcct
ctggtgatagatccccagcaacagggaattaagtggatcaagaataagtatggaatggac
ctgaaagtcacacatttgggccagaaagggtttttgaatgccattgaaactgctttggcc
tttggtgatgtcatcttaattgaaaatctcgaggaaacgatagatccagtcctggatcca
ctacttggcaggaacacaattaaaaaaggaaaaatcaaggggaaaaaacatacaattatt
tcaatcaacacagaaaacagcttcgataaaattcaagatcctttcatgaggaaaattctc
aacaaattgtgtatagaaggaacatacctcaaaacaataaaggccatatatgacaaaccc
acagctaacatattaaacagggaaaaactgaaagcctttcctgtaaaatctgaaacaaga
caaggattctcacttccaccacttctattcagcacaatactggaagttctaggcagcaag
tatatcaggattggagataaagaatgtgaatttaacaagaactttcgccttatccttcac
acaaaattggcaaatcctcactataagccggaattacaagctcagacaactctcctcaat
ttcacagtcacagaagatggtctagaagcccagctgctggcagaggttgtcagtattgaa
aggccagatttggagaaacttaagttggtattgacaaagcaccaaaatgattttaaaatt
gagctcaagtatctggaagacgatctccttttgcgcctttctgcggcagagggaagcttt
ctggatgacaccaaactggtagagagattggaggcaacaaagaccaccgtggcagagata
gagcacaaggtgattgaagccaaagaaaatgaaagaaaaatcaacgaggcccgagaatgt
tacagaccagtggcagcaagagcatctcttctttattttgttattaatgacctccaaaaa
atcaaccccctctaccaattctctttgaaggcttttaacgtgctgttccacagagcgatc
gagcaggctgacaaggtggaagacatgcagggacgcatctctatcctgatggagagcatc
acccatgctgtcttcctctacaccagccaggcgctgtttgagaaggacaagctcaccttc
ctgtcccagatggcttttcagattttgttgagaaagaaagagatagaccctcttgaattg
gatttcctgcttcgattcacagttgaacacactcatctgagtcccgttgacttcctaact
tctcagtcatggagtgctatcaaggcaattgccgtcatggaagaatttcgaggcatagac
cgagatgtggaaggatctgccaagcagtggaggaagtgggtagaatccgagtgtccagaa
aaagaaaaattacctcaagaatggaagaagaaaagtttaatacagaagctgattcttctg
agagcaatgcgccctgacagaatgacgtatgctctcagaaattttgtagaggaaaaactg
ggtgcgaagtatgtggagaggaccagattggacttagttaaagcattcgaagaaagcagc
ccagccacccccatattcttcatcctgtctccgggggtagatgcccttaaagacctggag
attcttggcaaaagacttggctttacaattgactctggaaaattccacaatgtgtcttta
ggacaaggtcaggagacggtggcagaagtggccctggagaaagcttccaaaggaggacac
tgggtcatcctccaaaatgttcatttggtagccaagtggctaggaaccttggagaagctc
cttgaaagattcagccaaggaagccacagagattacagggttttcatgagtgctgagtct
gcacctacaccagatgagcatatcatccctcaaggactcctggaaaattccattaagatc
actaatgaacccccaacagggatgctggccaatttgcatgccgccctgtacaactttgat
caggatacacttgaaatatgctccaaggagcaggagtttaaaagcatccttttttctctc
tgctacttccacgcctgtgttgctgggagactgaggtttggcccccagggctggagccga
agctatccttttaatcctggagacctcaccatttgtgccagtgtcctctacaactactta
gaggcaaactctaaagtcccatgggaagatctccgttatctctttggtgagatcatgtat
ggaggccacatcacagatgactgggatcgcaaactgtgtcgggtgtatttagaagaattc
atgaatccatctctgactgaagatgaactgatgctggcaccaggttttgctgccccaccc
tacctagattatgcaggctaccaccagtacatagaggagatgcttcctccagaaagcccg
gcactgtatggcctccacccaaatgctgaaatagaattcctgacagtgacatccaacact
ctcttcagaactttgctggagatgcagcccaggaatgcactcagtggtgatgaactgggg
cagtctacagaagaaaaggttaagaatgtcttggatgacattttggagaaacttccagaa
gagttcaacatggcagagataatgcaaaaaaattcaaatagaagcccatatgttcttgtt
tgcttccaagaatgtgagaggatgaatattctcattcgggaaatacgtatatcacttgaa
caactggaccttagtttgaagggggaattggcattatctcctgctgtggaagcccagcag
tttgcattgagttatgacacggtaccagacacttggagcaaactggcttatccttctact
tatggcctagcccagtggttcaatgacctcctcctgcgatgccgagaactcgatacttgg
acacaagaccttacccttccggctgtcgtgtggctctccggcttcttcaaccctcagtcc
ttcttaactgcgcagccatgtgccaatgcccaagaacctaaaacaccctatgggactaaa
ggatgcctcaatttactggtagctcccgggaaccttacatgcaacacttttatcctattc
aatttttgttatatttccaaagcaatcatgcagacgatggctcgaaaaaatgagtggccc
ctggataaaacgcgcttgactgctgatgttaccaaaaaaacaaaggaagattatggacac
ccgccaagggaaggtgcatacctccacggactcttcatggagggcgcccgctgggacacc
caagcaggaaccattgttgaagcccgtctcaaggagctggcatgccctatgccggtcatc
tttgcaaaagccacccccgtggacagacaagaaaccaaacagacctacgagtgccctgtg
tatagaaccaaactgagaggccccagctacatctggaccttcaggctgaagagcgaagag
aagactgcaaaatgggttctggctggagtggctctgcttctagaagcgtaa

>gi568815591r:21802978_22016897|GENSCAN_predicted_peptide_2|548_aa
MGCSSSFKPFMLKEASGPAGLFEFCRMIPKEVADIFNAPSDDEEFVGFRDDVPMETLSSE
ESCDSFDSLESGKQELMKLLLCSWCPSFPSLCSCRSPRSSYPNAHPFLLGSVIGLTSVQC
IKYIHIVVHPFSSSPSEALYPFSSSSFYPSLDVRFHSKYFTEELRRIFIEDTDSETEDFA
GFTQSDLNGKTNPEVMVIITTGRDVGGNVFNPVSERVLLVVESDLSDDGKASLVSEEEED
EEEDKATPRRSRSRRSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILER
KKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMRKKTVRRAFSEGQIT
RRMNPTRSARPPEKFALENFTVSAAKFAEEFYSFRRRKTIGGKCREYRRRHRISSFRPVE
DITEEDLENVAITVRDKIYDKVLGNTCHQCRQKTIDTKTVCRNQGCCGVRGQFCGPCLRN
RYGEDVRSALLDPDWVCPPCRGICNCSYCRKRDGRCATGILIHLAKFYGYDNVKEYLESL
QKELVEDN

>gi568815591r:21802978_22016897|GENSCAN_predicted_CDS_2|1647_bp
atggggtgctcctcctcctttaaaccatttatgttaaaagaagcttctgggccagcaggg
ctgtttgaattttgtagaatgatccctaaagaagtggctgacatctttaacgcccccagt
gatgatgaagagtttgttggcttccgagatgatgttcccatggaaaccctctcgtcagag
gagagctgcgatagttttgactcactagagtcagggaaacaggagttgatgaaacttctg
ctgtgttcctggtgtccatccttcccttccctctgcagctgccgtagccctcgtagctct
tacccgaatgctcatcccttcctactaggatctgttataggattgacctccgttcagtgc
attaagtacattcacattgttgtccatccattttcgtcatctccatcagaagctctgtac
ccgttcagtagctcctcattctacccttccctggatgtgcgctttcattccaaatacttc
acagaagagctaagaagaatttttatagaggacactgactcagagactgaggattttgca
ggatttacgcagagtgatctgaatggaaagactaacccagaagtaatggtaataattaca
acaggaagggatgtgggtggtaacgtttttaatcctgtttctgaaagagttttacttgtc
gtggagtcagatttgagtgatgatggcaaagcatctttggtgagcgaggaagaggaagat
gaagaagaagataaggctacccctagaagaagcaggtctagaagaagtagtattggtctt
cgagtagcctttcagttccccaccaagaagctggccaacaaaccagataaaaacagttct
tccgagcagttgttttctagcgcacgcttacagaatgagaaaaaaacaattcttgaaaga
aagaaagactgtagacaggtgatacaaagggaagattctacctctgagtctgaggatgac
tctcgggatgagagccaggagagttcagatgctttgctgaaaaggaccatgaacatcaag
gagaacaaagccatgaggaagaagacagtgaggcgggccttctcggagggacagatcacg
cggcgtatgaacccaacccggagtgcgcggcctcctgagaagtttgctctagagaacttc
actgtctcagccgctaaatttgcggaagagttttacagcttccgaagaaggaagacaatt
ggggggaaatgccgggagtacagacgacgtcaccgtatatcttcttttcggccagtggag
gatatcaccgaagaggacttagaaaatgttgccataactgttcgagataaaatctatgat
aaagttctgggtaacacgtgccatcagtgtcgacaaaagaccatcgacaccaagacagtg
tgtcggaaccagggttgctgtggtgtgcgaggacagttctgtggaccatgcctgcggaac
cgctatggggaggatgtcagatcggcattgctggacccggattgggtgtgtcccccctgt
cgtgggatctgcaattgcagctactgtcggaagcgtgacggccgctgtgccacaggaatc
ctcattcatctggccaagttttatggttatgacaatgttaaggaatatctggagagctta
caaaaggagctggtagaagacaattaa

>gi568815591r:21802978_22016897|GENSCAN_predicted_peptide_3|155_aa
MRKNQHKKAENSKNQNASSPPKDHNSLPAREQNWMENEFDELTEVRFRRWVINSSELKKH
VLTQYKETKNLEKRLEELLTRITRLEKNINDLMELKNTARKLHEAYTSINSQIDQAEERI
SETEDQLNEIKHEEKIREKKSEKGTKKASKKYGTM

>gi568815591r:21802978_22016897|GENSCAN_predicted_CDS_3|468_bp
atgaggaaaaaccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcct
ccaaaggatcacaactccttaccagcaagggaacaaaactggatggagaatgagtttgat
gaattgacagaagtacgcttcagaaggtgggtaataaactcctccgagctaaagaagcat
gttctaactcaatacaaggaaactaagaaccttgaaaaaaggttagaggaattgctaacg
agaataaccaggttagaaaagaacataaatgacctgatggagctgaaaaacacagcacga
aaacttcatgaagcatacacaagtatcaatagccaaatcgatcaagcagaagaaaggata
tcagagactgaagatcaacttaatgaaataaagcatgaagagaagattagagaaaaaaag
agtgaaaaaggaacaaaaaaagcctccaagaaatatgggactatgtga

>gi568815591r:21802978_22016897|GENSCAN_predicted_peptide_4|104_aa
MKKLTQNRTTTLKLNNLLLNDYRGAPTPALNRLGAPDPQCRSQGPRFQPKASRTGWQREV
KLWSLVVGKLPSPPHITENRAGLVLWTTHQRICLLQRAGSSMSL

>gi568815591r:21802978_22016897|GENSCAN_predicted_CDS_4|315_bp
atgaagaaactcactcaaaaccgcacaactacattgaaactgaacaacctgctcctgaat
gactacaggggcgcgcccactccggcactcaaccggctgggcgcgccagatccccagtgc
cgcagccaagggccacgtttccagcccaaggccagcaggaccgggtggcaaagggaagtc
aaactgtggagcttagttgtgggcaaactccctagtcctccccacataacagaaaatcgt
gctggtttggtgctctggacaactcaccagagaatctgccttctgcagagagctggaagc
agcatgagtctatag

>gi568815591r:21802978_22016897|GENSCAN_predicted_peptide_5|259_aa
MNLQFGYVIDEESQSNLTGGITKKLRVTLPSETFKSQYTIYNTPFSPTSVIEEVSVEMVP
CHPGSLMATMSDVSLLTRARQLSDSSSEVDLECGGTGQKTSYRSNCEVGPAGIRCDRDSS
GNGERYSSCHGLLGIPYSSFYSVPQAISQSSFQPGGQDPKQSMIMGYNFAKILMALPGSS
SYFPKRQRNLAWVFPTLVKPAVLGPPQRHQHQLSSMALRGVCVSFLQALFTAPVDNGNLF
PSFYPSPRVAGCFLQLSSL

>gi568815591r:21802978_22016897|GENSCAN_predicted_CDS_5|780_bp
atgaacctgcagtttggttatgttatcgatgaagagtcacagtcaaacctgacgggtgga
atcacaaagaaattacgcgtgacacttccaagcgaaacctttaaaagccagtacacaatt
tacaacactcccttttctcctacttccgtaattgaggaagtcagtgttgagatggtcccc
tgtcatcctggatccctgatggctacaatgagtgacgtttccctgctgacccgtgccagg
cagctctctgacagcagttcagaggtggatttggaatgtgggggcacagggcagaaaacc
agttacaggagcaattgtgaagtaggcccagcagggataaggtgtgaccgagacagtagc
ggcaatggagagaggtacagctcctgtcatggccttttgggaataccctacagcagcttc
tactcagttccccaagcaatcagtcagtcttctttccaacctggaggacaggacccaaaa
caatccatgatcatgggatacaactttgccaaaatcttaatggccttaccaggcagcagc
agttacttcccaaagaggcagcggaatctagcttgggtttttcccacccttgtaaaacca
gctgtattgggcccacctcagagacatcagcatcagctgagcagcatggcccttcggggt
gtgtgtgtttcatttctgcaggccctcttcacagcacctgtggataatggtaacctcttc
ccctccttctaccccagccctagggttgctggctgcttcctgcagttgtcctctctgtga