Result of FASTA (ccds) for pF1KB6723
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6723, 91 aa
  1>>>pF1KB6723 91 - 91 aa - 91 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7513+/-0.00057; mu= 11.5955+/- 0.034
 mean_var=55.4319+/-10.994, 0's: 0 Z-trim(112.4): 46  B-trim: 297 in 2/48
 Lambda= 0.172264
 statistics sampled from 13143 (13191) to 13143 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.405), width:  16
 Scan time:  1.450

The best scores are:                                      opt bits E(32554)
CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17          (  91)  609 158.3   6e-40
CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17      (  93)  338 91.0 1.2e-19
CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17          (  92)  332 89.5 3.2e-19
CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17          (  92)  325 87.7 1.1e-18
CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17        (  87)  272 74.5 9.4e-15
CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17         (  93)  248 68.6 6.2e-13
CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17         (  89)  246 68.1 8.5e-13
CCDS11279.1 CCL11 gene_id:6356|Hs108|chr17         (  97)  238 66.1 3.6e-12
CCDS5578.1 CCL26 gene_id:10344|Hs108|chr7          (  94)  231 64.4 1.2e-11
CCDS11278.1 CCL7 gene_id:6354|Hs108|chr17          (  99)  225 62.9 3.4e-11
CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17         ( 109)  222 62.2 6.3e-11


>>CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17               (91 aa)
 initn: 609 init1: 609 opt: 609  Z-score: 830.7  bits: 158.3 E(32554): 6e-40
Smith-Waterman score: 609; 100.0% identity (100.0% similar) in 91 aa overlap (1-91:1-91)

               10        20        30        40        50        60
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP
               10        20        30        40        50        60

               70        80        90 
pF1KB6 AVVFVTRKNRQVCANPEKKWVREYINSLEMS
       :::::::::::::::::::::::::::::::
CCDS11 AVVFVTRKNRQVCANPEKKWVREYINSLEMS
               70        80        90 

>>CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17           (93 aa)
 initn: 339 init1: 260 opt: 338  Z-score: 466.5  bits: 91.0 E(32554): 1.2e-19
Smith-Waterman score: 338; 48.9% identity (83.7% similar) in 92 aa overlap (1-91:1-92)

               10        20        30         40        50         
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN
       :.::.:::::.: . :::  . ..: ..:: : :::.: .: .:.  : .:: ::..::.
CCDS32 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
               10        20        30        40        50        60

      60        70        80        90  
pF1KB6 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS 
       :.:.:.:...:::::.: ..::..:...::.: 
CCDS32 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
               70        80        90   

>>CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17               (92 aa)
 initn: 344 init1: 323 opt: 332  Z-score: 458.5  bits: 89.5 E(32554): 3.2e-19
Smith-Waterman score: 332; 49.5% identity (81.3% similar) in 91 aa overlap (1-91:1-91)

               10        20        30        40        50        60
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP
       :.::.:::::.: . :::   :::  ..  : :::.: .: .:.  : .:: ::..::.:
CCDS11 MQVSTAALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKP
               10        20        30        40        50        60

               70        80        90  
pF1KB6 AVVFVTRKNRQVCANPEKKWVREYINSLEMS 
       .:.:.:...:::::.: ..::..:...::.: 
CCDS11 GVIFLTKRSRQVCADPSEEWVQKYVSDLELSA
               70        80        90  

>>CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17               (92 aa)
 initn: 359 init1: 260 opt: 325  Z-score: 449.1  bits: 87.7 E(32554): 1.1e-18
Smith-Waterman score: 325; 45.7% identity (83.7% similar) in 92 aa overlap (1-91:1-92)

               10        20        30         40        50         
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN
       ::. ...:.......:.:.:: ..:..::  : :::.: :: :::  . .:. ::. ::.
CCDS11 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
               10        20        30        40        50        60

      60        70        80        90 
pF1KB6 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS
       ::::: :....::::.: ..::.::. .::..
CCDS11 PAVVFQTKRSKQVCADPSESWVQEYVYDLELN
               70        80        90  

>>CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17             (87 aa)
 initn: 226 init1: 146 opt: 272  Z-score: 378.3  bits: 74.5 E(32554): 9.4e-15
Smith-Waterman score: 272; 42.4% identity (78.3% similar) in 92 aa overlap (1-91:1-87)

               10        20        30         40        50         
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN
       ::. ...:.......:.:. : ..:..::  : :::.: :: :::  . .:. ::. ::.
CCDS32 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
               10        20        30        40        50        60

      60        70        80        90 
pF1KB6 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS
       ::::     ..::::.: ..::.::. .::..
CCDS32 PAVV-----GKQVCADPSESWVQEYVYDLELN
                    70        80       

>>CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17              (93 aa)
 initn: 256 init1: 219 opt: 248  Z-score: 345.6  bits: 68.6 E(32554): 6.2e-13
Smith-Waterman score: 248; 36.3% identity (72.5% similar) in 91 aa overlap (1-89:1-91)

               10        20        30          40        50        
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDTTP--CCFAYIARPLPRAHIKEYFYTSGKCS
       ::.:.::.  .:. :   .  . :   .   :  :::.: .  .:: .: .:. :...::
CCDS32 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS
               10        20        30        40        50        60

       60        70        80        90 
pF1KB6 NPAVVFVTRKNRQVCANPEKKWVREYINSLEMS
       .:..::.:.....::.::  :::..::....  
CCDS32 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN
               70        80        90   

>>CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17              (89 aa)
 initn: 249 init1: 209 opt: 246  Z-score: 343.2  bits: 68.1 E(32554): 8.5e-13
Smith-Waterman score: 246; 38.5% identity (73.6% similar) in 91 aa overlap (1-91:1-88)

               10        20        30        40        50        60
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP
       ::  :::: :.. . :::   : .  ...   ::..: .  .:.  : .:  :: .: .:
CCDS11 MKGLAAALLVLVCTMALC---SCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPKP
               10           20        30        40        50       

               70        80        90  
pF1KB6 AVVFVTRKNRQVCANPEKKWVREYINSLEMS 
       .:...:...::.::.:.::::..::..:... 
CCDS11 GVILLTKRGRQICADPNKKWVQKYISDLKLNA
        60        70        80         

>>CCDS11279.1 CCL11 gene_id:6356|Hs108|chr17              (97 aa)
 initn: 252 init1: 183 opt: 238  Z-score: 331.9  bits: 66.1 E(32554): 3.6e-12
Smith-Waterman score: 238; 43.3% identity (68.9% similar) in 90 aa overlap (1-89:1-89)

               10        20        30        40        50          
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFY-TSGKCSN
       :::::: : ..:::.:.   . :.: :  :: :::    : .:  ... :   ::::: .
CCDS11 MKVSAALLWLLLIAAAFSPQGLAGPASVPTT-CCFNLANRKIPLQRLESYRRITSGKCPQ
               10        20        30         40        50         

      60        70        80        90       
pF1KB6 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS      
        ::.: :.  ...::.:.::::.. .. :.        
CCDS11 KAVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPKP
      60        70        80        90       

>>CCDS5578.1 CCL26 gene_id:10344|Hs108|chr7               (94 aa)
 initn: 256 init1: 216 opt: 231  Z-score: 322.7  bits: 64.4 E(32554): 1.2e-11
Smith-Waterman score: 231; 37.8% identity (76.8% similar) in 82 aa overlap (9-89:8-89)

               10        20        30         40        50         
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDTTP-CCFAYIARPLPRAHIKEYFYTSGKCSN
               ...:.:. :    ...  .:: .  ::: :  .::: . .. : .::..::.
CCDS55  MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQ
                10        20        30        40        50         

      60        70        80        90    
pF1KB6 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS   
        ::.:.:.....::..:.::::..::. :.     
CCDS55 RAVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL
      60        70        80        90    

>>CCDS11278.1 CCL7 gene_id:6354|Hs108|chr17               (99 aa)
 initn: 231 init1: 127 opt: 225  Z-score: 314.4  bits: 62.9 E(32554): 3.4e-11
Smith-Waterman score: 225; 35.2% identity (71.4% similar) in 91 aa overlap (1-89:1-91)

               10        20        30         40        50         
pF1KB6 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYT-SGKCS
       ::.::: : ..: :.:.   . :.: . .: : ::. .: . .:. ... :  : :..: 
CCDS11 MKASAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCP
               10        20        30        40        50        60

       60        70        80        90       
pF1KB6 NPAVVFVTRKNRQVCANPEKKWVREYINSLEMS      
         ::.: :. ....::.: .:::..... :.        
CCDS11 REAVIFKTKLDKEICADPTQKWVQDFMKHLDKKTQTPKL
               70        80        90         




91 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:35:43 2016 done: Fri Nov  4 23:35:44 2016
 Total Scan time:  1.450 Total Display time: -0.050

Function used was FASTA [36.3.4 Apr, 2011]
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