Result of FASTA (ccds) for pF1KB6741
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6741, 98 aa
  1>>>pF1KB6741 98 - 98 aa - 98 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7449+/-0.000569; mu= 11.7055+/- 0.034
 mean_var=53.2502+/-10.424, 0's: 0 Z-trim(111.7): 49  B-trim: 0 in 0/51
 Lambda= 0.175757
 statistics sampled from 12563 (12612) to 12563 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.387), width:  16
 Scan time:  1.540

The best scores are:                                      opt bits E(32554)
CCDS11281.1 CCL13 gene_id:6357|Hs108|chr17         (  98)  652 172.3 4.3e-44
CCDS11277.1 CCL2 gene_id:6347|Hs108|chr17          (  99)  449 120.8 1.4e-28
CCDS11280.1 CCL8 gene_id:6355|Hs108|chr17          (  99)  431 116.2 3.2e-27
CCDS11278.1 CCL7 gene_id:6354|Hs108|chr17          (  99)  422 114.0 1.6e-26
CCDS11279.1 CCL11 gene_id:6356|Hs108|chr17         (  97)  406 109.9 2.6e-25
CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17      (  93)  272 75.9 4.2e-15
CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17          (  92)  265 74.1 1.4e-14
CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17          (  92)  240 67.8 1.2e-12
CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17         (  93)  236 66.8 2.4e-12
CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17        (  87)  233 66.0 3.8e-12
CCDS34670.1 CCL24 gene_id:6369|Hs108|chr7          ( 119)  222 63.3 3.4e-11
CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17         ( 109)  218 62.2 6.3e-11
CCDS5578.1 CCL26 gene_id:10344|Hs108|chr7          (  94)  216 61.7   8e-11
CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17          (  91)  215 61.4 9.3e-11


>>CCDS11281.1 CCL13 gene_id:6357|Hs108|chr17              (98 aa)
 initn: 652 init1: 652 opt: 652  Z-score: 905.0  bits: 172.3 E(32554): 4.3e-44
Smith-Waterman score: 652; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)

               10        20        30        40        50        60
pF1KB6 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQ
               10        20        30        40        50        60

               70        80        90        
pF1KB6 KAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
       ::::::::::::::::::::::::::::::::::::::
CCDS11 KAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
               70        80        90        

>>CCDS11277.1 CCL2 gene_id:6347|Hs108|chr17               (99 aa)
 initn: 267 init1: 259 opt: 449  Z-score: 626.8  bits: 120.8 E(32554): 1.4e-28
Smith-Waterman score: 449; 64.6% identity (89.9% similar) in 99 aa overlap (1-98:1-99)

               10        20        30        40        50          
pF1KB6 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYV-ITTSRCP
       :::::.::::::..:.: :::::::::.:.: :::..:...:::.::: ::  ::.:.::
CCDS11 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP
               10        20        30        40        50        60

      60        70        80        90        
pF1KB6 QKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
       ..::::.: ..::::::::.::::. : :: ....: ::
CCDS11 KEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPKT
               70        80        90         

>>CCDS11280.1 CCL8 gene_id:6355|Hs108|chr17               (99 aa)
 initn: 429 init1: 245 opt: 431  Z-score: 602.1  bits: 116.2 E(32554): 3.2e-27
Smith-Waterman score: 431; 62.2% identity (88.8% similar) in 98 aa overlap (1-97:1-98)

               10        20        30        40        50          
pF1KB6 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYV-ITTSRCP
       :::::.:::::::.:.:.::::::::....: ::::.  ..:: .:::.::. ::. .::
CCDS11 MKVSAALLCLLLMAATFSPQGLAQPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCP
               10        20        30        40        50        60

      60        70        80        90        
pF1KB6 QKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
       ..::::.:: :::.::::::.::.. :::: .  ..:: 
CCDS11 KEAVIFKTKRGKEVCADPKERWVRDSMKHLDQIFQNLKP
               70        80        90         

>>CCDS11278.1 CCL7 gene_id:6354|Hs108|chr17               (99 aa)
 initn: 420 init1: 231 opt: 422  Z-score: 589.8  bits: 114.0 E(32554): 1.6e-26
Smith-Waterman score: 422; 64.3% identity (85.7% similar) in 98 aa overlap (1-97:1-98)

               10        20        30        40        50          
pF1KB6 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTS-RCP
       ::.::.:::::: .:::.::::::: ..:. .:::. : .:::  :::.::  ::: .::
CCDS11 MKASAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCP
               10        20        30        40        50        60

      60        70        80        90        
pF1KB6 QKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
       ..::::.::: ::::::: .::::..:::: .:..: : 
CCDS11 REAVIFKTKLDKEICADPTQKWVQDFMKHLDKKTQTPKL
               70        80        90         

>>CCDS11279.1 CCL11 gene_id:6356|Hs108|chr17              (97 aa)
 initn: 411 init1: 214 opt: 406  Z-score: 568.0  bits: 109.9 E(32554): 2.6e-25
Smith-Waterman score: 406; 64.3% identity (87.8% similar) in 98 aa overlap (1-97:1-96)

               10        20        30        40        50          
pF1KB6 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYV-ITTSRCP
       :::::.:: :::..:::.::::: : .  ::.::::.....:: ::::.::  ::...::
CCDS11 MKVSAALLWLLLIAAAFSPQGLAGPAS--VPTTCCFNLANRKIPLQRLESYRRITSGKCP
               10        20          30        40        50        

      60        70        80        90        
pF1KB6 QKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
       ::::::.:::.:.::::::.::::. ::.: .:. : : 
CCDS11 QKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPKP
       60        70        80        90       

>>CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17           (93 aa)
 initn: 285 init1: 263 opt: 272  Z-score: 384.6  bits: 75.9 E(32554): 4.2e-15
Smith-Waterman score: 272; 42.7% identity (76.4% similar) in 89 aa overlap (1-89:1-89)

               10        20        30        40        50        60
pF1KB6 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQ
       :.::.. : .:: : :.  : :. : : ..:..:::...:..:  . . .:  :.:.: .
CCDS32 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
               10        20        30        40        50        60

               70        80        90        
pF1KB6 KAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
        .::: :: :...::::.:.:::.:.. :         
CCDS32 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA     
               70        80        90        

>>CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17               (92 aa)
 initn: 289 init1: 265 opt: 265  Z-score: 375.1  bits: 74.1 E(32554): 1.4e-14
Smith-Waterman score: 265; 40.4% identity (76.4% similar) in 89 aa overlap (1-89:1-89)

               10        20        30        40        50        60
pF1KB6 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQ
       ::. ...: ::...:::   .:. : . . :..:::.....:.  . . .:  :.: : :
CCDS11 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
               10        20        30        40        50        60

               70        80        90        
pF1KB6 KAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
        ::.:.:: .:..::::.:.:::.:.  :         
CCDS11 PAVVFQTKRSKQVCADPSESWVQEYVYDLELN      
               70        80        90        

>>CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17               (92 aa)
 initn: 244 init1: 196 opt: 240  Z-score: 340.8  bits: 67.8 E(32554): 1.2e-12
Smith-Waterman score: 240; 39.3% identity (75.3% similar) in 89 aa overlap (1-89:1-88)

               10        20        30        40        50        60
pF1KB6 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQ
       :.::.. : .:: : :.  : ..   : ..:..:::...:..:  . . .:  :.:.: .
CCDS11 MQVSTAALAVLLCTMALCNQ-FSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
               10        20         30        40        50         

               70        80        90        
pF1KB6 KAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
        .::: :: ....::::.:.:::.:.. :         
CCDS11 PGVIFLTKRSRQVCADPSEEWVQKYVSDLELSA     
      60        70        80        90       

>>CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17              (93 aa)
 initn: 238 init1: 224 opt: 236  Z-score: 335.3  bits: 66.8 E(32554): 2.4e-12
Smith-Waterman score: 236; 37.8% identity (72.2% similar) in 90 aa overlap (1-89:1-90)

                10        20        30        40        50         
pF1KB6 MKVS-AVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCP
       ::.: :..  .::.: :.. .  ..  .   :: ::::... ::  ::. .:  :.:.: 
CCDS32 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS
               10        20        30        40        50        60

      60        70        80        90        
pF1KB6 QKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
       . ...: :: :. .:..:..::::.:.: .         
CCDS32 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN      
               70        80        90         

>>CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17             (87 aa)
 initn: 249 init1: 153 opt: 233  Z-score: 331.6  bits: 66.0 E(32554): 3.8e-12
Smith-Waterman score: 233; 38.2% identity (71.9% similar) in 89 aa overlap (1-89:1-84)

               10        20        30        40        50        60
pF1KB6 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQ
       ::. ...: ::...:::   .:. : . . :..:::.....:.  . . .:  :.: : :
CCDS32 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
               10        20        30        40        50        60

               70        80        90        
pF1KB6 KAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT
        ::.     ::..::::.:.:::.:.  :         
CCDS32 PAVV-----GKQVCADPSESWVQEYVYDLELN      
                    70        80             




98 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:43:40 2016 done: Fri Nov  4 23:43:40 2016
 Total Scan time:  1.540 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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