GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:44:10

Sequence gi568815581f:34256527_34458128 : 201602 bp : 43.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    196    301  106  1  1  105   47   127 0.629   8.18
 1.02 PlyA +    655    660    6                               1.05

 2.00 Prom +  13659  13698   40                              -1.46
 2.01 Init +  13765  13840   76  0  1   79  110   113 0.972  11.87
 2.02 Intr +  14620  14737  118  2  1  109   48    63 0.981   3.92
 2.03 Term +  15171  15276  106  0  1  120   47   102 0.980   7.18
 2.04 PlyA +  15750  15755    6                               1.05

 3.00 Prom +  25535  25574   40                              -4.46
 3.01 Init +  29283  29358   76  2  1   94  115   102 0.771  12.86
 3.02 Intr +  30570  30681  112  1  1   44   95    57 0.761   1.44
 3.03 Term +  31059  31164  106  0  1   64   36   145 0.958   4.78
 3.04 PlyA +  31302  31307    6                              -0.45

 4.05 PlyA -  31331  31326    6                               1.05
 4.04 Term -  34298  34133  166  1  1   78   42    83 0.137   0.09
 4.03 Intr -  34865  34785   81  1  0   80   81    40 0.160   1.25
 4.02 Intr -  38754  36585 2170  1  1   43   53   710 0.050  50.34
 4.01 Init -  42082  42034   49  1  1   62   53    44 0.048  -0.59
 4.00 Prom -  44565  44526   40                              -4.36

 5.00 Prom +  47095  47134   40                              -3.46
 5.01 Init +  62976  63051   76  2  1   84  110   109 0.977  12.00
 5.02 Intr +  63743  63860  118  0  1   77   76    63 0.931   3.52
 5.03 Term +  64276  64381  106  1  1  118   52    36 0.846   0.88
 5.04 PlyA +  65843  65848    6                               1.05

 6.03 PlyA -  66942  66937    6                               1.05
 6.02 Term -  68755  68321  435  1  0   68   42   118 0.382   0.49
 6.01 Init -  80656  80252  405  1  0   45    8   286 0.163  12.89
 6.00 Prom -  81868  81829   40                              -1.46

 7.00 Prom +  90016  90055   40                              -2.36
 7.01 Init + 100001 100076   76  1  1   69  111    98 0.956   9.81
 7.02 Intr + 100949 101063  115  0  1   73   34    86 0.569   1.21
 7.03 Term + 101500 101605  106  1  1  107   43    80 0.921   3.28
 7.04 PlyA + 102060 102065    6                              -3.74

 8.04 PlyA - 102072 102067    6                               1.05
 8.03 Term - 104135 104033  103  1  1  122   53    26 0.484   0.25
 8.02 Intr - 105370 105259  112  2  1   96  101   -19 0.687  -0.36
 8.01 Init - 106635 106560   76  0  1   83   73   127 0.941  10.29
 8.00 Prom - 109334 109295   40                              -4.46

 9.00 Prom + 109914 109953   40                              -7.66
 9.01 Init + 110822 110888   67  1  1   46  103    67 0.493   5.23
 9.02 Intr + 119172 119292  121  1  1   33   91    96 0.127   3.95
 9.03 Intr + 129185 129360  176  2  2   38   37   101 0.045  -0.42
 9.04 Intr + 132511 132659  149  2  2   49   94    91 0.075   5.75
 9.05 Term + 132825 132881   57  2  0   72   40    90 0.714   0.29
 9.06 PlyA + 136038 136043    6                               1.05

10.10 PlyA - 136755 136750    6                               1.05
10.09 Term - 144500 144208  293  0  2   71   43   166 0.407   5.91
10.08 Intr - 151682 151632   51  0  0   42   95    52 0.074   0.18
10.07 Intr - 166652 166524  129  0  0   86   70    14 0.333   0.07
10.06 Intr - 168219 168097  123  1  0   87  109    19 0.585   4.46
10.05 Intr - 178475 178313  163  2  1   88   49    25 0.013  -1.85
10.04 Intr - 192357 192289   69  0  0   77  111    67 0.637   7.28
10.03 Intr - 193084 192927  158  2  2   65   60    18 0.406  -3.57
10.02 Intr - 197713 197426  288  2  0   94   92    73 0.579   5.52
10.01 Init - 200865 200826   40  0  1   97   39    70 0.747   3.35

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  26299  26427  129  0  0   78   99   105 0.831  10.75
S.002 Term +  26787  26891  105  2  0   38   50    83 0.868  -2.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_1|35_aa
XFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPKT

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_1|108_bp
nncttcaagaccattgtggccaaggagatctgtgctgaccccaagcagaagtgggttcag
gattccatggaccacctggacaagcaaacccaaactccgaagacttga

>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_2|99_aa
MKASAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCP
REAVIFKTKLDKEICADPTQKWVQDFMKHLDKKTQTPKL

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_2|300_bp
atgaaagcctctgcagcacttctgtgtctgctgctcacagcagctgctttcagcccccag
gggcttgctcagccagttgggattaatacttcaactacctgctgctacagatttatcaat
aagaaaatccctaagcagaggctggagagctacagaaggaccaccagtagccactgtccc
cgggaagctgtaatcttcaagaccaaactggacaaggagatctgtgctgaccccacacag
aagtgggtccaggactttatgaagcacctggacaagaaaacccaaactccaaagctttga

>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_3|97_aa
MKVSAALLWLLLIAAAFSPQGLAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQK
AVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPKP

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_3|294_bp
atgaaggtctccgcagcacttctgtggctgctgctcatagcagctgccttcagcccccag
gggctcgctgggccagcttctgtcccaaccacctgctgctttaacctggccaataggaag
ataccccttcagcgactagagagctacaggagaatcaccagtggcaaatgtccccagaaa
gctgtgatcttcaagaccaaactggccaaggatatctgtgccgaccccaagaagaagtgg
gtgcaggattccatgaagtatctggaccaaaaatctccaactccaaagccataa

>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_4|821_aa
MTIALQINSGMALKGRKIQTTIGEYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESL
NRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSF
DEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG
MQGWFNIHKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYLKI
IRAIYDKPIANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQ
LGKEEVKLSLFADDMIIYLENPIVSAQNLLKLISNFSKVSEYKINVQKSQAFLYTNNRQT
ESQIMSELPFTIASKRIKYLGIQLTRDMKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGR
INIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGG
ITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHTYNYLIFDKPEKNKQWGKD
SLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRRKTIKTLEENLGITIQDIG
MGKDFMSKTPKAMATKDKIDKWDLIKIKSFCTAKETTVRVNRQPTKWEKIFATYSSDKGL
ISRIYNELQQIYKKKTNNPIKKWVKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTT
MRYHLTPVRMAIIKKSGNNRLAGQETNRQGEEEVTIRARVMGPGHQKSKVLLPQLLEVLA
ANASQRNFLYEARRQLKTAALPRVVSSSRSILQPGLVQMGV

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_4|2466_bp
atgacaattgctctacagatcaactcagggatggccttgaaagggagaaaaatacaaact
accatcggagaatactacaaacacctctacgcaaataaactagaaaatctagaagaaatg
gataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatctctg
aatagaccaataacaggagctgaaattgtggcaataatcaatagtttaccaaccaaaaag
agtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactggta
ccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattt
gatgaggccagcatcattctgataccaaagccgggcagagacacaaccaaaaaagagaat
tttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaac
cgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctggg
atgcaaggctggttcaatatacacaaatcaataaatgtaatccagcatataaacagagcc
aaagacaaaaaccacatgattatctcaatagatgcagaaaaagcctttgacaaaattcaa
caacccttcatgctaaaaactctcaataaattaggtattgatgggacgtatctcaaaata
ataagagctatctatgacaaacccatagccaatatcatactgaatgggcaaaaactggaa
gcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaac
atagtgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggtattcaa
ttaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattatatatctagaa
aaccccattgtctctgcccaaaatctccttaagctgataagcaacttcagcaaagtctca
gaatacaaaatcaatgtgcaaaaatcacaagcattcttatacaccaacaacagacaaaca
gagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaataccta
ggaatccaacttacaagggacatgaaggacctcttcaaggagaactacaaaccactgctc
aaagaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaaga
atcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatcccc
atcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcatatgg
aaccaaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggc
atcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtac
tggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataacgccg
catacctacaactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggat
tccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactg
gatcccttccttacaccttatacaaaaatcaattcaagatggattaaagatttaaacgtt
agacgtaaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacataggc
atgggcaaggacttcatgtccaaaacaccaaaagcaatggcaacaaaagacaaaattgac
aaatgggatctaattaaaataaagagcttctgcacagcaaaagaaactaccgtcagagtg
aacaggcaacctacaaaatgggagaaaattttcgcaacctactcatctgacaaagggcta
atatccagaatctacaatgaactccaacaaatttacaagaaaaaaacaaacaaccccatc
aaaaagtgggtgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaa
aaacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccact
atgagataccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaga
cttgcaggccaagaaactaacaggcaaggagaggaagaggtcactatccgggccagggta
atgggccctggtcatcagaagtctaaagtgcttcttccccagctgctagaagtgttggca
gccaatgcttctcagcggaatttcctctatgaggcccgccgtcagctaaaaacagctgcc
ttgcccagagttgtgtcctcttccaggagcatcctgcagccagggctggttcagatgggg
gtataa

>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_5|99_aa
MKVSAALLCLLLMAATFSPQGLAQPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCP
KEAVIFKTKRGKEVCADPKERWVRDSMKHLDQIFQNLKP

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_5|300_bp
atgaaggtttctgcagcgcttctgtgcctgctgctcatggcagccactttcagccctcag
ggacttgctcagccagattcagtttccattccaatcacctgctgctttaacgtgatcaat
aggaaaattcctatccagaggctggagagctacacaagaatcaccaacatccaatgtccc
aaggaagctgtgatcttcaagaccaaacggggcaaggaggtctgtgctgaccccaaggag
agatgggtcagggattccatgaagcatctggaccaaatatttcaaaatctgaagccatga

>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_6|279_aa
MCKFLDTYTLPRLNQEDVECLNRPITSSEIEAVIKSLPTKKSPRTNGFTAKFYQMYKEEL
VTFLLKLFQTIEKGGFLPNSFYEASIILIPKCVKDTPKEENLRAISLMNVNVKILHKIPA
NQIQQHIKKLIHHDQPTQMRRNQKNSSGNMTKQGSSTPPKDHTSSPAMDPNQDEISELPE
KEFIRSIIKLIKEAPEKGEVLLKEIKKKIQHMNGKISSEIDSINKSQSQLLEMKDTVREM
QNVLESLSSRIKQAEERTSELEDKAFELNQSNKGEEKRI

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_6|840_bp
atgtgtaaattcctggacacatacaccctcccaagactaaaccaggaagatgttgaatgc
ctgaatagaccaataacaagttctgaaattgaggcagtaattaagagcctaccaaccaaa
aaaagcccaagaacaaatggattcacagccaaattctaccagatgtacaaggaggagctg
gtaacattccttctgaaactattccaaacaatagaaaaagggggattcctccctaactca
ttttatgaggccagcatcatccttataccaaaatgcgtcaaagacacaccaaaagaagaa
aatttaagggcaatatccctgatgaatgtcaacgtgaaaatcctccataaaataccggca
aaccaaatccagcagcacatcaaaaagcttatccaccacgatcaacctacccaaatgaga
aggaaccagaaaaacagttctggtaatatgacaaaacaaggctcttcaacacccccaaaa
gatcacactagctcaccagcaatggatccaaaccaagatgaaatctctgaattgccagaa
aaagaattcataaggtcaattattaagctaatcaaggaggcaccagagaaaggtgaagtc
ctacttaaagaaataaaaaaaaagatacagcatatgaatggaaaaatctccagtgaaata
gatagcataaataaatcacaatcacaacttctggaaatgaaggacacagttagagaaatg
caaaatgtgctggaaagtctcagcagtagaatcaaacaagcagaagaaagaacttcagag
cttgaagacaaggcttttgaattaaaccaatccaacaaaggtgaagaaaaaagaatttaa

>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_7|98_aa
MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQ
KAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_7|297_bp
atgaaagtctctgcagtgcttctgtgcctgctgctcatgacagcagctttcaacccccag
ggacttgctcagccagatgcactcaacgtcccatctacttgctgcttcacatttagcagt
aagaagatctccttgcagaggctgaagagctatgtgatcaccaccagcaggtgtccccag
aaggctgtcatcttcagaaccaaactgggcaaggagatctgtgctgacccaaaggagaag
tgggtccagaattatatgaaacacctgggccggaaagctcacaccctgaagacttga

>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_8|96_aa
MQIITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNE
GLIFKLKRGKEACALDTVGWVQRHRKMLRHCPSKRK

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_8|291_bp
atgcagatcatcaccacagccctggtgtgcttgctgctagctgggatgtggccggaagat
gtggacagcaagagcatgcaggtacccttctccagatgttgcttctcatttgcggagcaa
gagattcccctgagggcaatcctgtgttacagaaataccagctccatctgctccaatgag
ggcttaatattcaagctgaagagaggcaaagaggcctgcgccttggacacagttggatgg
gttcagaggcacagaaaaatgctgaggcactgcccgtcaaaaagaaaatga

>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_9|189_aa
MYQTLGIPQRDKTNMGPGIGNCAVWRTDFQDNKNQSRGNSKKPGKGGQWLRLARGQRKVD
GSSSLSAEGAQKPRPPIGKGAFLKSLKETMKAHNLKGCQKSLQNSALTSAKASHTIAEYV
QWTDPLVASDRERGRSMGEDADTQKDPNLYRKVKVDISPAPGSEPDMHGAKETVILAKLL
CGQDENEEE

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_9|570_bp
atgtaccagacactggggataccgcagcgggacaagacaaacatgggccctggtattggg
aattgtgctgtatggagaacagattttcaggacaataagaaccagtcaagaggcaatagc
aagaagccaggcaagggagggcaatggctccggctggcccggggacagcgcaaagtggat
ggatccagctccttgtccgcagaaggtgctcagaagccacggcctcctataggaaaggga
gcctttcttaagtccctgaaagagacaatgaaggctcataatcttaagggttgccaaaag
tctttgcaaaattctgccttgaccagcgctaaagcctcacacaccattgctgagtacgtg
cagtggactgatccactggtggccagtgacagggagaggggaaggagcatgggagaagat
gcagatacccagaaagatccaaacctctaccgcaaagtcaaggtagacatttccccagcc
ccggggagtgagcctgatatgcatggagcaaaggagacagtgattctcgccaagctcctg
tgtgggcaggatgagaacgaggaggaataa

>gi568815581f:34256527_34458128|GENSCAN_predicted_peptide_10|437_aa
MGATDHMLIDDRICNCLELSIPIAPSSPNLLLCLGGSRSSSAECGTWKTGSNPAPSFLRP
GMKVQRQRASSPESELAQQVMGSTRHKGPGSCMCLHGNGQPAQNLCALTEPFIEHLLYAR
SLNNLHSGETDTVISCKSVSVSYIQLHIKCCGHTEDFIGALGMHGGSGRGPDPNLLEPFA
TQMNNVVVTQEVHGIRTTLVLNVESLRCQLVTLGQFQTSLLLSVCSVDDGNICPAGAPVS
HLCRIRGVAALGLGAWWDEQQRECGLRCRKGLGSGATEKPVQGLECQSWPLTLLHVQFWL
CGVCEVQGDMTRVTVCVSSPPSKVLAIKKLSTAVERDEASGPGTGKSLLLQKRTRFAMFI
SHIFSGTIMFLYSKFPLTSVIRYRSQTTEFVATVTSPPQMCDGQHVEGDLCASSGSPCCR
GAVRGNLEILVSLPIFP

>gi568815581f:34256527_34458128|GENSCAN_predicted_CDS_10|1314_bp
atgggggccaccgaccacatgctgattgatgacagaatctgcaactgcctggagctgagt
ataccaattgctccttcttccccaaatctcttgctttgtctaggggggtctagaagcagc
tcagcagaatgtggaacctggaagacaggctctaatccagccccctcgtttttgagacca
ggaatgaaggttcagaggcagagggcaagttccccagagtcagagcttgcacagcaggtc
atgggcagcaccaggcacaagggtccaggcagctgcatgtgcctccatggcaatgggcag
cctgctcagaacctctgtgcactcacagaacccttcattgagcatctgctgtatgctagg
tccttaaataacttacattctggggagacagacacagtaattagttgtaaaagtgtatca
gtgtcatacatacagttacatatcaaatgctgtggacatacagaagactttattggtgct
ttggggatgcatgggggtagtggaagaggtcctgaccccaacttgctggagccttttgct
acccagatgaacaacgtggtggtgacacaggaagtgcatgggataaggacaaccctggtt
ttgaatgtggagtctctcaggtgtcagctggtgactttgggccaattccagacctctctg
ctcctctctgtatgcagtgtggatgatggtaacatctgccctgcaggagcccctgtgtct
cacttgtgtagaattcgaggggttgcagctttgggtttgggggcttggtgggacgagcag
cagagggaatgtggcctgcggtgtaggaagggcttaggctcaggtgctactgagaagcca
gtgcaggggctggagtgtcagagctggcccctcaccctactgcatgtgcagttctggtta
tgtggggtctgtgaggtccagggagacatgaccagagtgacggtgtgtgtcagctccccc
ccctccaaagtacttgccattaagaagctgagtacagctgtggagagggatgaggcatca
ggtcctggcacaggcaagagcctgctcctgcagaagaggacccgctttgccatgtttatt
tctcatatcttctctggcacgatcatgttcctttattcaaaatttccactcacatcagtc
atccgttatcgatcacagacgacggagtttgtggccacagtgacatctcccccacagatg
tgtgatggccagcatgtggaaggggacctttgtgctagctcaggctctccgtgttgcagg
ggagcagtcagaggaaacttggaaattcttgtctctttgcccatctttccctag