GENSCAN 1.0	Date run:  5-Nov-116	Time: 01:50:00

Sequence gi568815591f:116399782_116606118 : 206337 bp : 38.91% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10071  10345  275  2  2   71   58   276 0.044  19.39
 1.02 Term +  11208  12921 1714  0  1   24   43   627 0.034  38.48
 1.03 PlyA +  13112  13117    6                               1.05

 2.00 Prom +  14612  14651   40                              -3.65
 2.01 Init +  17275  17346   72  0  0   95  111   -20 0.076   2.12
 2.02 Intr +  33092  33338  247  1  1   28  115   196 0.302  12.41
 2.03 Intr +  45467  45542   76  0  1   96   55    26 0.007  -2.25
 2.04 Term +  53476  53644  169  1  1  121   47    55 0.102   1.07
 2.05 PlyA +  54287  54292    6                               1.05

 3.00 Prom +  57621  57660   40                              -3.95
 3.01 Init +  73948  74036   89  0  2   81   39   145 0.618   9.06
 3.02 Intr +  75196  75349  154  1  1    0   68   114 0.063  -0.25
 3.03 Term +  76790  76948  159  1  0   27   49   194 0.996   6.36
 3.04 PlyA +  77854  77859    6                               1.05

 4.00 Prom +  80066  80105   40                              -5.25
 4.01 Init +  91269  91423  155  2  2  101   35    69 0.787   2.40
 4.02 Term +  91981  92092  112  1  1   88   43   104 0.862   2.95
 4.03 PlyA +  92241  92246    6                               1.05

 5.00 Prom +  97001  97040   40                              -5.95
 5.01 Init +  97110  97168   59  2  2   98  100    96 0.978  12.63
 5.02 Intr +  99889 100150  262  1  1   29   67   302 0.861  18.77
 5.03 Intr + 100479 100666  188  2  2   94   85   206 0.954  18.47
 5.04 Intr + 105706 105844  139  1  1   19   16   109 0.216  -3.65
 5.05 Term + 106190 106378  189  1  0  128   37   115 0.903   6.87
 5.06 PlyA + 106860 106865    6                               1.05

 6.00 Prom + 109642 109681   40                              -2.95
 6.01 Sngl + 112041 112244  204  2  0   76   41   185 0.941   7.54
 6.02 PlyA + 114143 114148    6                               1.05

 7.00 Prom + 119961 120000   40                              -6.75
 7.01 Init + 125620 125778  159  0  0   41   66   150 0.835   6.06
 7.02 Intr + 126744 126908  165  2  0  116  121   375 0.998  42.84
 7.03 Term + 159165 159506  342  2  0  102   36   340 0.418  23.73
 7.04 PlyA + 159627 159632    6                               1.05

 8.00 Prom + 171671 171710   40                              -3.65
 8.01 Init + 180348 180479  132  2  0   84   85    50 0.409   2.76
 8.02 Intr + 181708 181861  154  0  1   75   87    67 0.824   4.02
 8.03 Intr + 186083 186220  138  0  0   59   37    91 0.121   0.61
 8.04 Intr + 188189 188268   80  0  2   66   40    70 0.077  -1.65
 8.05 Intr + 193470 193600  131  2  2   79   85    38 0.092   1.17
 8.06 Term + 195361 195475  115  1  1   99   44    81 0.096   1.86
 8.07 PlyA + 196238 196243    6                               1.05

 9.02 PlyA - 197214 197209    6                               1.05
 9.01 Term - 197984 197794  191  0  2   49   50   174 0.519   6.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  11356  12921 1566  0  0   44   43   646 0.894  50.80
S.002 Intr +  75223  75349  127  1  1   25   68   121 0.881   3.56


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:116399782_116606118|GENSCAN_predicted_peptide_1|662_aa
MEQSWMENDFDELREEGFRRSNYSELREDIQTKGKEVENFEKSSEEYITRIANTQKCLKE
LMELKTKAPELREECRSLRSQCDQLEERASVIDTHSLKIKGWRKIYQANGKQKKAGVAIL
VSDKTDFKPTKIKRDKEGHYIMVKGSNQQEELTILNKYAPNTGAPRFIKQVLSDLQRDLD
SHTLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAP
HHTYFKTDHIVGSKVLLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNHSTTWKLNNLLL
NDYCVHNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTL
TSQLKKLEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERISKTDKPL
ARLIKKKREKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDIYT
LPRLNQEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQ
SIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDGKILNKILANRIQQHIKK
LIHHDQVGFIPGIQGWFNIRKSINVIQHINRTKDKHHMIISIDAEKAFDKIQQPFMQKLS
IN

>gi568815591f:116399782_116606118|GENSCAN_predicted_CDS_1|1989_bp
atggaacaaagctggatggagaatgactttgacgagctgagagaagaaggcttcagacga
tcaaattactctgagctacgggaggacattcaaaccaaaggcaaagaagttgaaaacttt
gaaaaaagttcagaagaatatataactagaatagccaatacacagaagtgcttaaaggag
ctgatggagctgaaaaccaaggctccagaactacgtgaagaatgcagaagcctcaggagc
caatgcgatcaactggaagaaagggcatcagtgatagacacacatagtctcaaaataaaa
ggatggaggaagatctaccaagcaaatggaaaacaaaaaaaggcaggggttgcaatccta
gtctctgataaaacagactttaaaccaacaaagatcaaaagagacaaagaaggccattac
ataatggtaaagggatcaaatcaacaagaagagctaactatcctaaataaatatgcaccc
aatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagac
tcccatacattaataatgggagactttaacaccccactgtcaacattagacagatcaaca
agacagaaagtcaacaaggatacccaggaattgaactcagctctgcaccaagcggaccta
atagacatctacagaactctccaccccaaatcaacagaatatacatttttttcagcacca
caccacacctatttcaaaactgaccacatagttggaagtaaagttctcctcagcaaatgt
aaaagaacagaaattataacaaactgtctctcagaccacagtgcaatcaaactagaactc
aggattaagaaactcactcaaaaccactcaactacatggaaactgaacaacttgctcctg
aatgactactgcgtacataacgaaatgaaggcagaaataaagatgttttttgaaaccaac
gagaacaaagacacaacataccagaatctctgggacgcattcaaagcagtgtgtagaggg
aaatttatagcactaaatgcccacaagagaaagcaggaaagatccaaaattgacacccta
acatcacaattaaaaaaactagaaaagcaagagcaaacacattcaaaagctagcagaagg
caagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaa
aaaattaatgaatccaggagctggttttttgaaaggatcagcaaaactgataaaccgcta
gcaagactaataaagaagaaaagagagaagaatcaaatagatgcaataaaaaatgataaa
ggggatatcaccaccgatcccacagaaatacaaactaccatcagagaatactacaaacac
ctctacgcaaataaactagaaaatctagaagaaatggataaattcctcgacatatacact
ctcccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggagctgaa
attgtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcaca
gccgaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaa
tcaatagaaaaagagggaatcctccctaactcattttatgaggccagcatcatcctgata
ccaaagccaggcagagacacaacaaaaaaagagaattttagaccaatatccttgatgaac
attgatggaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaag
cttatccaccatgatcaagtgggcttcatccctgggatacaaggctggttcaatatacgc
aaatcaatcaatgtaatccagcatataaacagaaccaaagacaaacaccacatgattatc
tcaatagatgcagaaaaggcctttgacaaaattcaacagcccttcatgcaaaaactctca
ataaattag

>gi568815591f:116399782_116606118|GENSCAN_predicted_peptide_2|187_aa
MVSVTNFMIFIKTSKGCGKDLLTPYEIHKEKLTASWPFAKEQVQKDTHILFGSGPTSNRY
GLVPRCLLTEEAKNTAPCSHQWTPPQQQGLPSPLPMREMVAVQQENGSWHQTMPGMELFL
KVEGLMALYHRRPFQVFPSPPGIKANFLSWLTRLYMIRLYLSPHYLSDFHGFPLDSILAT
LASSRLC

>gi568815591f:116399782_116606118|GENSCAN_predicted_CDS_2|564_bp
atggtctctgtcacaaatttcatgatttttattaagacctcaaaaggctgtggcaaagat
ttgcttaccccgtatgaaattcacaaagagaaacttactgcttcttggccttttgctaaa
gagcaagtgcagaaagacacacatattctctttggcagtgggcctacatcaaatcgttat
ggtctcgtaccaagatgtcttttgactgaggaagctaagaatacggctccttgttctcac
cagtggactcctcctcagcagcaggggctcccttccccactacccatgagggagatggtg
gcagttcaacaggaaaatggttcctggcatcagacaatgcctggaatggaactattccta
aaagtggaagggctgatggcattgtaccatcgtagacctttccaagtcttcccatctccc
cctggaataaaagcaaatttcttatcgtggcttacaagactttacatgattaggctgtac
ctgagtcctcattacctctctgatttccatggctttccccttgactccattctagccacg
ctggcctcctcacgactctgctga

>gi568815591f:116399782_116606118|GENSCAN_predicted_peptide_3|133_aa
MAKESLSKMNKSKGITLPDYEEAIVTKTACNPTIAYLPRGKEVIIRKRYLHVHVYSRTIC
DCKNVEPAKTPINQREDKENVWHPTSSPSLNLTEEPNACSTDGDTNPKAVPCMLNPEDLK
TITLWDSKAELDP

>gi568815591f:116399782_116606118|GENSCAN_predicted_CDS_3|402_bp
atggccaaagaaagcctaagcaaaatgaacaaatccaaaggcatcacattacccgactac
gaggaagccatagtcaccaaaacagcatgcaatcccactattgcgtatctacccagagga
aaagaagtcattatacgaaaaagatacctgcacgtgcatgtttacagcaggacaatttgc
gattgcaaaaatgtggaaccagccaaaacgcccatcaaccagcgagaggataaagaaaat
gtgtggcatccaacatcctctccttcattgaaccttactgaagaacctaacgcctgctcc
actgacggtgacaccaacccaaaagctgtgccatgcatgctgaatcctgaagatctcaaa
accattacactttgggattccaaagcagaactggacccatga

>gi568815591f:116399782_116606118|GENSCAN_predicted_peptide_4|88_aa
MEPVEVSQVRSEPRPGRRSEMGEGESTDFEGRTNRPHWRRSNEGNGGMKADTPSVTRYGN
SFREKENYKKYLETVTREKQLKEMELLS

>gi568815591f:116399782_116606118|GENSCAN_predicted_CDS_4|267_bp
atggagcctgtggaggtttctcaggtgagatctgaacccagaccagggaggagaagtgaa
atgggagagggtgaaagcactgattttgaaggtagaactaacaggcctcattggagaaga
agtaatgagggaaatggaggaatgaaagctgacacaccaagtgtcacaagatatgggaac
agcttcagagaaaaagaaaattacaagaaatatttggaaacagtgacacgtgaaaaacaa
ctgaaagaaatggagctgcttagctag

>gi568815591f:116399782_116606118|GENSCAN_predicted_peptide_5|278_aa
MAEGKQGVSPHVATEGAKERARRGEGGRGRALREGEAARTGSRTAPAGLQRPRTKAAMGL
ETEKADVQLFMDDDSYSHHSGLEYADPEKFADSDQDRDPHRLNSHLKLGFEDVIAEPVTT
HSFDKVWICSHALFEISKYVMYKFLTVFLAIPLAFIAGILFATLSCLHICSAGCTGSTVP
ASTLGKDLRKLPLIVEGEGGAGTSHGKKGSKRENVEDFNAFCKDLPNGSAFSADNMEECD
RCYHCSIVYERRTMLLFCQPATEPGLNTWTPGLEIGIL

>gi568815591f:116399782_116606118|GENSCAN_predicted_CDS_5|837_bp
atggcggaaggtaaacagggagtatcacctcacgtggccacagaaggagccaaagaaagg
gctaggcgaggcgagggggggcggggccgggcgctacgggaaggggaggccgcgcggacc
gggagccgcaccgcgccagccgggctgcagcggccgcgcaccaaggctgcgatggggctg
gagacggagaaggcggacgtacagctcttcatggacgacgactcctacagccaccacagc
ggcctcgagtacgccgaccccgagaagttcgcggactcggaccaggaccgggatccccac
cggctcaactcgcatctcaagctgggcttcgaggatgtgatcgcagagccggtgactacg
cactcctttgacaaagtgtggatctgcagccatgccctctttgaaatcagcaaatacgta
atgtacaagttcctgacggtgttcctggccattcccctggccttcattgcgggaattctc
tttgccaccctcagctgtctgcacatctgttctgcgggctgtacaggaagcacagtgcca
gcatctactttaggcaaggacctcaggaagcttccacttatagtggaaggagaaggagga
gcaggcacgtcacatggcaagaaagggagcaagagagagaatgtggaggattttaatgcc
ttttgtaaagacctgcctaatggttctgccttcagtgcagacaatatggaagagtgtgac
agatgttatcattgctccattgtgtacgagcgtaggacgatgcttctcttctgtcagcct
gcaactgagccaggattgaatacttggaccccaggtctggagattgggatactgtaa

>gi568815591f:116399782_116606118|GENSCAN_predicted_peptide_6|67_aa
MRALLEPCALKTMPKRATENENETVTCDHLSVSSFALPLCAVDCCGMSAAKKDHAAVREI
RGHHFNN

>gi568815591f:116399782_116606118|GENSCAN_predicted_CDS_6|204_bp
atgagggctctgctggaaccatgtgccctaaagacaatgccgaagcgtgcaactgaaaat
gaaaatgaaactgtaacttgtgaccatctatctgtgtcttctttcgccttgcctctctgt
gctgttgactgttgcggcatgtctgcggcaaagaaagaccatgctgcagtcagagaaatc
agaggacaccacttcaacaattaa

>gi568815591f:116399782_116606118|GENSCAN_predicted_peptide_7|221_aa
MLPCRGTPAVRPCLLGVRRGGVQGGGVIYPSPGDSPRDSPPGAQTGRSRRRRAGHLYTVP
IREQGNIYKPNNKAMADELSEKQVYDAHTKEIDLVNRDPKHLNDDVVKIDFEDVIAEPEG
THSFDGIWKASFTTFTVTKYWFYRLLSALFGIPMALIWGIYFAILSFLHIWAVVPCIKSF
LIEIQCISRVYSIYVHTVCDPLFEAVGKIFSNVRINLQKEI

>gi568815591f:116399782_116606118|GENSCAN_predicted_CDS_7|666_bp
atgctcccttgtcgcgggacccccgcggtccggccctgcctgctgggggttcgaagaggt
ggagtgcagggtggaggtgttatttacccgagtcctggggacagtccccgggactctccg
ccaggcgcccagaccggcaggtcccgcaggcggcgcgcgggacatctctacaccgttccc
atccgggaacagggcaacatctacaagcccaacaacaaggccatggcagacgagctgagc
gagaagcaagtgtacgacgcgcacaccaaggagatcgacctggtcaaccgcgaccctaaa
cacctcaacgatgacgtggtcaagattgactttgaagatgtgattgcagaaccagaaggg
acacacagttttgacggcatttggaaggccagcttcaccaccttcactgtgacgaaatac
tggttttaccgcttgctgtctgccctctttggcatcccgatggcactcatctggggcatt
tacttcgccattctctctttcctgcacatctgggcagttgtaccatgcattaagagcttc
ctgattgagattcagtgcatcagccgtgtctattccatctacgtccacaccgtctgtgac
ccactctttgaagctgttgggaaaatattcagcaatgtccgcatcaacttgcagaaagaa
atataa

>gi568815591f:116399782_116606118|GENSCAN_predicted_peptide_8|249_aa
MVSVNSLALLAYLLLGRARQRNFHCSAERKKTMGPTMQILKRTKDQNLFGPRSFGCDLPI
LQHCLVLPSNAQKTEPYSQCLCHWPLQTKETLLEAVALGMLWGQPSTPGCVVGTLARITL
ATEGPWTGLEGSNTEETLTEGVGHRATLPTEELSPPATIIVAVVPASFEPIQKSVDHIKF
PFLTSYPRILYNIPPNLTPSEHQVPSLTKKESPSYVSLFDCFHDMIPSPVNILVTLFRAG
CNLPVPVLL

>gi568815591f:116399782_116606118|GENSCAN_predicted_CDS_8|750_bp
atggtgagtgttaattctctggcacttctggcctacctgctcctgggcagagcaagacag
agaaattttcactgttctgcagagagaaaaaagactatgggccccaccatgcagatactg
aaaagaacaaaggatcagaacctgtttgggcccagatcatttggctgtgaccttcctatc
ctgcaacactgcctggttcttccaagtaatgcccagaagactgaaccctattctcaatgt
ctctgccactggcctcttcaaactaaagagactctcctagaagcagttgctctaggtatg
ctctggggacagcctagtactccaggctgtgtagttggcaccctggccaggatcaccctt
gccactgagggcccctggacaggacttgaagggtcaaacaccgaggaaacactgacagag
ggtgtgggacacagagccaccctccccacagaggagctctctcctcctgctaccattatc
gtggcagtagttcctgcctcttttgaacctatccaaaaatctgtggatcatataaagttt
ccttttcttacctcctacccccgaatactttacaacattccaccaaatcttactccctcg
gagcatcaggttcctagtctaaccaagaaagaaagcccaagctacgttagtttatttgac
tgttttcatgacatgataccaagccctgtcaacatcttagtcactctcttccgagctggc
tgcaacttgcctgtccctgtgcttctctga

>gi568815591f:116399782_116606118|GENSCAN_predicted_peptide_9|63_aa
XLEDGVYSCGRNITVDKTGLMLSSRGRAALPAARFLVVQWPATFEALPGALASSGAACFW
YQL

>gi568815591f:116399782_116606118|GENSCAN_predicted_CDS_9|192_bp
nagcttgaggatggggtgtatagttgtggcagaaatataactgtggataaaacagggctg
atgctctctagccgtggaagagcagctcttccagctgcccgctttctggttgttcagtgg
cctgccactttcgaggcactaccaggagcactggctagctctggagcagcatgcttctgg
tatcagttatga