GENSCAN 1.0	Date run:  5-Nov-116	Time: 01:49:31

Sequence gi568815591f:116426523_116659284 : 232762 bp : 38.92% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6351   6597  247  2  1   28  115   196 0.565  12.41
 1.02 Intr +  18726  18801   76  1  1   96   55    26 0.009  -2.25
 1.03 Term +  26735  26903  169  2  1  121   47    55 0.103   1.07
 1.04 PlyA +  27546  27551    6                               1.05

 2.00 Prom +  30880  30919   40                              -3.95
 2.01 Init +  47207  47295   89  1  2   81   39   145 0.618   9.06
 2.02 Intr +  48455  48608  154  2  1    0   68   114 0.063  -0.25
 2.03 Term +  50049  50207  159  2  0   27   49   194 0.996   6.36
 2.04 PlyA +  51113  51118    6                               1.05

 3.00 Prom +  53325  53364   40                              -5.25
 3.01 Init +  64528  64682  155  0  2  101   35    69 0.787   2.40
 3.02 Term +  65240  65351  112  2  1   88   43   104 0.862   2.95
 3.03 PlyA +  65500  65505    6                               1.05

 4.00 Prom +  70260  70299   40                              -5.95
 4.01 Init +  70369  70427   59  0  2   98  100    96 0.978  12.63
 4.02 Intr +  73148  73409  262  2  1   29   67   302 0.861  18.77
 4.03 Intr +  73738  73925  188  0  2   94   85   206 0.954  18.47
 4.04 Intr +  78965  79103  139  2  1   19   16   109 0.216  -3.65
 4.05 Term +  79449  79637  189  2  0  128   37   115 0.903   6.87
 4.06 PlyA +  80119  80124    6                               1.05

 5.00 Prom +  82901  82940   40                              -2.95
 5.01 Sngl +  85300  85503  204  0  0   76   41   185 0.941   7.54
 5.02 PlyA +  87402  87407    6                               1.05

 6.00 Prom +  93220  93259   40                              -6.75
 6.01 Init +  98879  99037  159  1  0   41   66   150 0.835   6.06
 6.02 Intr + 100003 100167  165  0  0  116  121   375 0.998  42.84
 6.03 Term + 132424 132765  342  0  0  102   36   340 0.418  23.73
 6.04 PlyA + 132886 132891    6                               1.05

 7.00 Prom + 144930 144969   40                              -3.65
 7.01 Init + 153607 153738  132  0  0   84   85    50 0.409   2.76
 7.02 Intr + 154967 155120  154  1  1   75   87    67 0.824   4.02
 7.03 Intr + 159342 159479  138  1  0   59   37    91 0.121   0.61
 7.04 Intr + 161448 161527   80  1  2   66   40    70 0.080  -1.65
 7.05 Intr + 166729 166859  131  0  2   79   85    38 0.098   1.17
 7.06 Term + 168620 168734  115  2  1   99   44    81 0.097   1.86
 7.07 PlyA + 169497 169502    6                               1.05

 8.03 PlyA - 170473 170468    6                               1.05
 8.02 Term - 171243 171053  191  1  2   49   50   174 0.389   6.33
 8.01 Init - 192821 192671  151  2  1   78   75    57 0.835   3.65
 8.00 Prom - 193646 193607   40                              -3.35

 9.05 PlyA - 194419 194414    6                               1.05
 9.04 Term - 196582 196466  117  1  0   18   49   130 0.692  -0.34
 9.03 Intr - 198103 198002  102  1  0  113   71    49 0.590   5.15
 9.02 Intr - 209239 209137  103  0  1  110   66    75 0.651   6.76
 9.01 Init - 218475 218342  134  0  2   65   73    89 0.680   4.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  48482  48608  127  2  1   25   68   121 0.881   3.56


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:116426523_116659284|GENSCAN_predicted_peptide_1|163_aa
YEIHKEKLTASWPFAKEQVQKDTHILFGSGPTSNRYGLVPRCLLTEEAKNTAPCSHQWTP
PQQQGLPSPLPMREMVAVQQENGSWHQTMPGMELFLKVEGLMALYHRRPFQVFPSPPGIK
ANFLSWLTRLYMIRLYLSPHYLSDFHGFPLDSILATLASSRLC

>gi568815591f:116426523_116659284|GENSCAN_predicted_CDS_1|492_bp
tatgaaattcacaaagagaaacttactgcttcttggccttttgctaaagagcaagtgcag
aaagacacacatattctctttggcagtgggcctacatcaaatcgttatggtctcgtacca
agatgtcttttgactgaggaagctaagaatacggctccttgttctcaccagtggactcct
cctcagcagcaggggctcccttccccactacccatgagggagatggtggcagttcaacag
gaaaatggttcctggcatcagacaatgcctggaatggaactattcctaaaagtggaaggg
ctgatggcattgtaccatcgtagacctttccaagtcttcccatctccccctggaataaaa
gcaaatttcttatcgtggcttacaagactttacatgattaggctgtacctgagtcctcat
tacctctctgatttccatggctttccccttgactccattctagccacgctggcctcctca
cgactctgctga

>gi568815591f:116426523_116659284|GENSCAN_predicted_peptide_2|133_aa
MAKESLSKMNKSKGITLPDYEEAIVTKTACNPTIAYLPRGKEVIIRKRYLHVHVYSRTIC
DCKNVEPAKTPINQREDKENVWHPTSSPSLNLTEEPNACSTDGDTNPKAVPCMLNPEDLK
TITLWDSKAELDP

>gi568815591f:116426523_116659284|GENSCAN_predicted_CDS_2|402_bp
atggccaaagaaagcctaagcaaaatgaacaaatccaaaggcatcacattacccgactac
gaggaagccatagtcaccaaaacagcatgcaatcccactattgcgtatctacccagagga
aaagaagtcattatacgaaaaagatacctgcacgtgcatgtttacagcaggacaatttgc
gattgcaaaaatgtggaaccagccaaaacgcccatcaaccagcgagaggataaagaaaat
gtgtggcatccaacatcctctccttcattgaaccttactgaagaacctaacgcctgctcc
actgacggtgacaccaacccaaaagctgtgccatgcatgctgaatcctgaagatctcaaa
accattacactttgggattccaaagcagaactggacccatga

>gi568815591f:116426523_116659284|GENSCAN_predicted_peptide_3|88_aa
MEPVEVSQVRSEPRPGRRSEMGEGESTDFEGRTNRPHWRRSNEGNGGMKADTPSVTRYGN
SFREKENYKKYLETVTREKQLKEMELLS

>gi568815591f:116426523_116659284|GENSCAN_predicted_CDS_3|267_bp
atggagcctgtggaggtttctcaggtgagatctgaacccagaccagggaggagaagtgaa
atgggagagggtgaaagcactgattttgaaggtagaactaacaggcctcattggagaaga
agtaatgagggaaatggaggaatgaaagctgacacaccaagtgtcacaagatatgggaac
agcttcagagaaaaagaaaattacaagaaatatttggaaacagtgacacgtgaaaaacaa
ctgaaagaaatggagctgcttagctag

>gi568815591f:116426523_116659284|GENSCAN_predicted_peptide_4|278_aa
MAEGKQGVSPHVATEGAKERARRGEGGRGRALREGEAARTGSRTAPAGLQRPRTKAAMGL
ETEKADVQLFMDDDSYSHHSGLEYADPEKFADSDQDRDPHRLNSHLKLGFEDVIAEPVTT
HSFDKVWICSHALFEISKYVMYKFLTVFLAIPLAFIAGILFATLSCLHICSAGCTGSTVP
ASTLGKDLRKLPLIVEGEGGAGTSHGKKGSKRENVEDFNAFCKDLPNGSAFSADNMEECD
RCYHCSIVYERRTMLLFCQPATEPGLNTWTPGLEIGIL

>gi568815591f:116426523_116659284|GENSCAN_predicted_CDS_4|837_bp
atggcggaaggtaaacagggagtatcacctcacgtggccacagaaggagccaaagaaagg
gctaggcgaggcgagggggggcggggccgggcgctacgggaaggggaggccgcgcggacc
gggagccgcaccgcgccagccgggctgcagcggccgcgcaccaaggctgcgatggggctg
gagacggagaaggcggacgtacagctcttcatggacgacgactcctacagccaccacagc
ggcctcgagtacgccgaccccgagaagttcgcggactcggaccaggaccgggatccccac
cggctcaactcgcatctcaagctgggcttcgaggatgtgatcgcagagccggtgactacg
cactcctttgacaaagtgtggatctgcagccatgccctctttgaaatcagcaaatacgta
atgtacaagttcctgacggtgttcctggccattcccctggccttcattgcgggaattctc
tttgccaccctcagctgtctgcacatctgttctgcgggctgtacaggaagcacagtgcca
gcatctactttaggcaaggacctcaggaagcttccacttatagtggaaggagaaggagga
gcaggcacgtcacatggcaagaaagggagcaagagagagaatgtggaggattttaatgcc
ttttgtaaagacctgcctaatggttctgccttcagtgcagacaatatggaagagtgtgac
agatgttatcattgctccattgtgtacgagcgtaggacgatgcttctcttctgtcagcct
gcaactgagccaggattgaatacttggaccccaggtctggagattgggatactgtaa

>gi568815591f:116426523_116659284|GENSCAN_predicted_peptide_5|67_aa
MRALLEPCALKTMPKRATENENETVTCDHLSVSSFALPLCAVDCCGMSAAKKDHAAVREI
RGHHFNN

>gi568815591f:116426523_116659284|GENSCAN_predicted_CDS_5|204_bp
atgagggctctgctggaaccatgtgccctaaagacaatgccgaagcgtgcaactgaaaat
gaaaatgaaactgtaacttgtgaccatctatctgtgtcttctttcgccttgcctctctgt
gctgttgactgttgcggcatgtctgcggcaaagaaagaccatgctgcagtcagagaaatc
agaggacaccacttcaacaattaa

>gi568815591f:116426523_116659284|GENSCAN_predicted_peptide_6|221_aa
MLPCRGTPAVRPCLLGVRRGGVQGGGVIYPSPGDSPRDSPPGAQTGRSRRRRAGHLYTVP
IREQGNIYKPNNKAMADELSEKQVYDAHTKEIDLVNRDPKHLNDDVVKIDFEDVIAEPEG
THSFDGIWKASFTTFTVTKYWFYRLLSALFGIPMALIWGIYFAILSFLHIWAVVPCIKSF
LIEIQCISRVYSIYVHTVCDPLFEAVGKIFSNVRINLQKEI

>gi568815591f:116426523_116659284|GENSCAN_predicted_CDS_6|666_bp
atgctcccttgtcgcgggacccccgcggtccggccctgcctgctgggggttcgaagaggt
ggagtgcagggtggaggtgttatttacccgagtcctggggacagtccccgggactctccg
ccaggcgcccagaccggcaggtcccgcaggcggcgcgcgggacatctctacaccgttccc
atccgggaacagggcaacatctacaagcccaacaacaaggccatggcagacgagctgagc
gagaagcaagtgtacgacgcgcacaccaaggagatcgacctggtcaaccgcgaccctaaa
cacctcaacgatgacgtggtcaagattgactttgaagatgtgattgcagaaccagaaggg
acacacagttttgacggcatttggaaggccagcttcaccaccttcactgtgacgaaatac
tggttttaccgcttgctgtctgccctctttggcatcccgatggcactcatctggggcatt
tacttcgccattctctctttcctgcacatctgggcagttgtaccatgcattaagagcttc
ctgattgagattcagtgcatcagccgtgtctattccatctacgtccacaccgtctgtgac
ccactctttgaagctgttgggaaaatattcagcaatgtccgcatcaacttgcagaaagaa
atataa

>gi568815591f:116426523_116659284|GENSCAN_predicted_peptide_7|249_aa
MVSVNSLALLAYLLLGRARQRNFHCSAERKKTMGPTMQILKRTKDQNLFGPRSFGCDLPI
LQHCLVLPSNAQKTEPYSQCLCHWPLQTKETLLEAVALGMLWGQPSTPGCVVGTLARITL
ATEGPWTGLEGSNTEETLTEGVGHRATLPTEELSPPATIIVAVVPASFEPIQKSVDHIKF
PFLTSYPRILYNIPPNLTPSEHQVPSLTKKESPSYVSLFDCFHDMIPSPVNILVTLFRAG
CNLPVPVLL

>gi568815591f:116426523_116659284|GENSCAN_predicted_CDS_7|750_bp
atggtgagtgttaattctctggcacttctggcctacctgctcctgggcagagcaagacag
agaaattttcactgttctgcagagagaaaaaagactatgggccccaccatgcagatactg
aaaagaacaaaggatcagaacctgtttgggcccagatcatttggctgtgaccttcctatc
ctgcaacactgcctggttcttccaagtaatgcccagaagactgaaccctattctcaatgt
ctctgccactggcctcttcaaactaaagagactctcctagaagcagttgctctaggtatg
ctctggggacagcctagtactccaggctgtgtagttggcaccctggccaggatcaccctt
gccactgagggcccctggacaggacttgaagggtcaaacaccgaggaaacactgacagag
ggtgtgggacacagagccaccctccccacagaggagctctctcctcctgctaccattatc
gtggcagtagttcctgcctcttttgaacctatccaaaaatctgtggatcatataaagttt
ccttttcttacctcctacccccgaatactttacaacattccaccaaatcttactccctcg
gagcatcaggttcctagtctaaccaagaaagaaagcccaagctacgttagtttatttgac
tgttttcatgacatgataccaagccctgtcaacatcttagtcactctcttccgagctggc
tgcaacttgcctgtccctgtgcttctctga

>gi568815591f:116426523_116659284|GENSCAN_predicted_peptide_8|113_aa
MRMEELISGRRHHKRSVVGGCIEVGLCKIGRVQEAQNRKTENTEGEKYRTELEDGVYSCG
RNITVDKTGLMLSSRGRAALPAARFLVVQWPATFEALPGALASSGAACFWYQL

>gi568815591f:116426523_116659284|GENSCAN_predicted_CDS_8|342_bp
atgaggatggaagagcttatctcaggcagaaggcatcataagaggtctgtggtaggagga
tgcattgaagtagggctttgcaagataggcagagtacaggaggcacagaatagaaaaact
gaaaacactgagggggaaaagtataggacagagcttgaggatggggtgtatagttgtggc
agaaatataactgtggataaaacagggctgatgctctctagccgtggaagagcagctctt
ccagctgcccgctttctggttgttcagtggcctgccactttcgaggcactaccaggagca
ctggctagctctggagcagcatgcttctggtatcagttatga

>gi568815591f:116426523_116659284|GENSCAN_predicted_peptide_9|151_aa
MESRSETGDEALDLCEVDAGTVCYTNGALIGNGTTETLPSGAGPGLSLILLYSPPAGGSV
GKISKCCKVNEGGDPGKGCDLTWPFGGLQTSHPAAMGVAGYKEVTGFPGQLFKMRQQKVQ
GKREESGKNSSVPITKTVEGVNLENSSGPTL

>gi568815591f:116426523_116659284|GENSCAN_predicted_CDS_9|456_bp
atggagtccagatcagagacaggagatgaagccttagatctgtgtgaggtagacgctggg
acagtctgctacacaaacggggcccttataggaaatgggactacagaaactctaccctct
ggggcaggcccaggactttccctgattcttctttactccccacctgcaggtggatcagta
ggcaaaatcagcaagtgttgtaaggtcaatgagggtggtgatccaggcaagggctgcgac
ttgacttggcctttcggtggtctgcaaacctctcatccagcagccatgggtgtggcaggc
tacaaagaagtgactggatttcctgggcaattgtttaagatgagacagcaaaaagtacaa
ggcaagagagaagaaagtggcaagaactccagtgtgcctataacaaagactgtggaggga
gtgaatctggagaactcatcgggacccacgttgtga