GENSCAN 1.0	Date run:  3-Nov-116	Time: 22:34:42

Sequence gi568815592f:36799445_37023438 : 223994 bp : 48.11% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -    626    523  104  2  2  108   84   252 0.929  25.77
 1.08 Intr -   5660   5524  137  0  2   83   89    82 0.934   8.09
 1.07 Intr -  14914  14734  181  1  1   36   49   104 0.129   0.74
 1.06 Intr -  22716  22670   47  1  2  124   92    34 0.594   5.53
 1.05 Intr -  23654  23614   41  1  2  140  113    61 0.599  11.67
 1.04 Intr -  28134  27945  190  1  1   72   72    73 0.186   2.74
 1.03 Intr -  30888  30840   49  0  1   68   51    40 0.125  -3.45
 1.02 Intr -  32932  32797  136  0  1   44   78   109 0.547   6.07
 1.01 Init -  39933  39839   95  0  2   80   99   172 0.616  17.37
 1.00 Prom -  55225  55186   40                              -4.46

 2.07 PlyA -  55409  55404    6                               1.05
 2.06 Term -  56589  56369  221  1  2  108   38   193 0.912  13.50
 2.05 Intr -  57210  57142   69  1  0   89  114    78 0.374   9.65
 2.04 Intr -  63500  63370  131  1  2    2   69   108 0.217   0.64
 2.03 Intr -  64598  64355  244  0  1  -11   87   144 0.343   0.96
 2.02 Intr -  72428  72274  155  1  2   98   92   168 0.764  17.92
 2.01 Init -  75328  75273   56  1  2   73   94    35 0.394   3.36
 2.00 Prom -  79080  79041   40                              -5.66

 3.00 Prom +  84321  84360   40                              -6.26
 3.01 Init +  88211  88262   52  1  1   36  115    23 0.440   1.12
 3.02 Intr +  95060  95159  100  0  1  105   87    32 0.724   3.97
 3.03 Intr +  99982 100189  208  1  1  101   93   171 0.830  17.98
 3.04 Intr + 102777 102990  214  2  1  117   98   -17 0.848   0.49
 3.05 Intr + 114840 114991  152  1  2  101  105   163 0.994  19.18
 3.06 Intr + 120134 120257  124  1  1  113   88    94 0.952  12.06
 3.07 Term + 123903 123997   95  1  2   84   49   102 0.901   3.89
 3.08 PlyA + 124057 124062    6                               1.05

 4.00 Prom + 147517 147556   40                              -6.16
 4.01 Init + 155317 155487  171  0  0  108  115   336 0.972  35.74
 4.02 Intr + 159701 159922  222  1  0  108   64   479 0.910  45.82
 4.03 Intr + 162007 162116  110  0  2   64   75   158 0.994  11.18
 4.04 Intr + 162442 162550  109  1  1   81   45    65 0.469   1.79
 4.05 Intr + 162684 162792  109  2  1   38   90    82 0.474   3.26
 4.06 Intr + 163491 164168  678  1  0   94  110   228 0.940  17.19
 4.07 Term + 164379 164500  122  1  2  107   49    34 0.945   0.04
 4.08 PlyA + 165367 165372    6                               1.05

 5.13 PlyA - 166919 166914    6                               1.05
 5.12 Term - 169530 169459   72  0  0  118   37    52 0.638   1.01
 5.11 Intr - 170670 170595   76  2  1  101   99    31 0.639   5.02
 5.10 Intr - 171029 170962   68  2  2   69   77    76 0.820   2.30
 5.09 Intr - 171250 171203   48  1  0  107   98    80 0.998   9.78
 5.08 Intr - 171612 171499  114  0  0   81   80    23 0.694   1.44
 5.07 Intr - 173352 173208  145  2  1  101   77   129 0.597  13.38
 5.06 Intr - 177806 177755   52  0  1   92   94    16 0.849   0.57
 5.05 Intr - 178247 178190   58  2  1   83  103    41 0.823   3.56
 5.04 Intr - 178711 178634   78  1  0  103   90   109 0.908  12.35
 5.03 Intr - 179167 179061  107  2  2  112  105   119 0.999  15.93
 5.02 Intr - 182228 182144   85  2  1   47  113    18 0.731  -0.41
 5.01 Init - 186675 186409  267  0  0   93   75   307 0.845  24.88
 5.00 Prom - 189516 189477   40                              -7.26

 6.00 Prom + 193869 193908   40                              -6.96
 6.01 Init + 206374 206441   68  0  2   85   80    69 0.747   6.34
 6.02 Intr + 209390 209621  232  2  1   92   51   186 0.831  13.08
 6.03 Intr + 211529 211610   82  1  1  119  -44   131 0.975   2.21
 6.04 Intr + 212236 212410  175  2  1   81   81   261 0.982  23.70
 6.05 Intr + 214165 214321  157  1  1   87   94   248 0.999  25.31
 6.06 Intr + 214518 214656  139  2  1   71   42   237 0.866  17.44
 6.07 Intr + 215202 215260   59  1  2   86  103    82 0.992   8.10
 6.08 Intr + 215448 215594  147  2  0   57   91   306 0.999  28.23
 6.09 Intr + 216324 216416   93  2  0  100  116   128 0.997  16.96
 6.10 Intr + 217763 217858   96  1  0   78   52    53 0.648   0.91
 6.11 Intr + 221097 221176   80  2  2   99   60   122 0.977   8.85
 6.12 Intr + 221265 221295   31  0  1   82   80     9 0.968  -2.37
 6.13 Intr + 222068 222160   93  1  0  112   84   146 0.999  16.76
 6.14 Intr + 222795 222926  132  2  0   74   73   145 0.983  12.44
 6.15 Intr + 223250 223403  154  1  1   69   89   104 0.989   8.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:36799445_37023438|GENSCAN_predicted_peptide_1|327_aa
MEQPEDMASLSEFDSLAGSIPATKVEITVSCRLGTGAIFPDFRESSSDLNNVDSVSRKRV
GNVCWMGKRGIYGAIWKSFVWEQLREAEDGKQDTGETEALRDGVSTCGIWTAAIRDIIGG
SLAATWINMASGALLQTYTARLGTEPKELPFYTPGQGNLLDKDMFSKSDPLCVMYTQGME
NKQWREFMETMLNYDLAFSILVMPLGPGSAVVLTDTGDKELNGMEYCVPPLEIFSQIDFS
FLIDLWVVFLPSLMGYKLGLTGPGGFSDFKIQVLAFFPFVIRPSNEGYKTSSFGRTEVID
NTLNPDFVRKFIVDYFFEEKQNLRFDL

>gi568815592f:36799445_37023438|GENSCAN_predicted_CDS_1|981_bp
atggagcagcctgaggacatggcgtcgctgagcgagttcgactccttggcgggcagcatc
ccggccaccaaggtggagatcaccgtgtcctgcagactagggacaggggccatcttcccg
gatttcagggagtcgtcatcagatctaaacaatgtggattctgtcagcaggaagagagtg
ggcaatgtttgctggatgggcaaacgtggcatctatggggccatttggaaatcgtttgtt
tgggagcagctccgagaggctgaggatgggaagcaggacacgggggaaactgaggcccta
agagacggtgtctcaacatgtggtatttggacggctgccatcagagacataataggggga
tctctggcggccacttggataaacatggcctctggagccctgcttcagacctacacagcc
agacttggaacagagcccaaggaactgccattttataccccggggcaggggaacctcctg
gacaaagacatgttttccaagtccgacccactgtgcgtcatgtatacccaagggatggag
aacaagcagtggcgggagtttatggagaccatgttgaattacgatcttgcattcagcatc
ttggttatgcctcttggtcctgggtcagctgtagtcctcaccgacacaggtgacaaggaa
ttgaatgggatggagtactgcgttcctccactagagatcttttcccagattgacttcagt
tttttaattgacctttgggttgtgttcctgccatcattaatggggtataaattgggcctg
acaggacctggtggcttctcagattttaaaatccaagttttagcatttttcccctttgtt
attcgtccaagtaatgaaggctataaaacatcttcatttgggcgcaccgaagtcatcgac
aacacgctcaatcctgacttcgtgcgcaagttcattgtggattactttttcgaggagaag
cagaacctccgttttgatctn

>gi568815592f:36799445_37023438|GENSCAN_predicted_peptide_2|291_aa
MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDF
MIQGGDPTGTANTKIEVYWVTPVKDKGSGNQVWKGRSSHSSAGLSNTCESRGAEEEQLPV
SSEEHQENVESWKPKEDSNSSRRVTSSVDQVKTGIQTSLTPKASEKEKTASSEPQSPLED
CGIVPVWYINKVFVSGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVT
LAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG

>gi568815592f:36799445_37023438|GENSCAN_predicted_CDS_2|876_bp
atggcggcaattcccccagattcctggcagccacccaacgtttacttggagaccagcatg
ggaatcattgtgctggagctgtactggaagcatgctccaaagacctgtaagaactttgct
gagttggctcgtcgaggttactacaatggcacaaaattccacagaattatcaaagacttc
atgatccaaggaggtgacccaacagggacagcaaacaccaagatagaggtttattgggta
acacctgtgaaagataaagggtcagggaaccaggtttggaagggaaggtcttcacacagc
agcgcaggcctgagtaacacctgtgaaagcagaggggcggaggaggagcagctgccagtg
agcagcgaggaacaccaggagaatgtggagtcgtggaagccaaaggaagacagcaactca
agcagaagggtgacatcgagtgtggatcaagtaaaaactggaatccagacgtctctgacc
ccaaaggcaagtgagaaagagaagacagcatcttcagaaccacaaagccccttggaggac
tgtggcattgttcccgtctggtatattaacaaagtgtttgtgtcaggtcgaggtggtgca
tctatctatggcaaacagtttgaagatgaacttcatccagacttgaaattcacgggggct
ggaattctcgcaatggccaatgcggggccagataccaatggcagccagttctttgtgacc
ctcgcccccacccagtggcttgacggcaaacacaccatttttggccgagtgtgtcagggc
ataggaatggtgaatcgcgtgggaatggtagaaacaaactcccaggaccgccctgtggac
gacgtgaagatcattaaggcatacccttctgggtag

>gi568815592f:36799445_37023438|GENSCAN_predicted_peptide_3|314_aa
MGNETEQVGSDQIIKGHGIIVVNHFPVLSRSVVIKGHVVSELPAQNRKITWDFILEDMDL
AANEISIYDKLSETVDLVRQTGHQCGMSEKAIEKFIRQLLEKNEPQRPPPQYPLLIVVYK
VLATLGLILLTAYFVIQPFSPLAPEPVLSGAHTWRSLIHHIRLMSLPIAKKYMSENKGVP
LHGGDEDRPFPDFDPWWTNDCEQNESEPIPANCTGCAQKHLKVMLLEDAPRKFERLHPLV
IKMHKMPDLFIIGSGEAMLQLIPPFQCRRHCQSVAMPIEPGDIGYVDTTHWKVYVIARGV
QPLVICDGTAFSEL

>gi568815592f:36799445_37023438|GENSCAN_predicted_CDS_3|945_bp
atgggaaatgaaactgaacaggtaggcagtgaccagatcataaagggccatggaatcatt
gtagtcaatcattttccagttctcagccgctcagttgtgatcaagggacacgtggtttcc
gaactgccagctcagaataggaaaataacttgggattttatattggaagacatggatctt
gctgccaacgagatcagcatttatgacaaactttcagagactgttgatttggtgagacag
accggccatcagtgtggcatgtcagagaaggcaattgaaaaatttatcagacagctgctg
gaaaagaatgaacctcagagaccccccccgcagtatcctctccttatagttgtgtataag
gttctcgcaaccttgggattaatcttgctcactgcctactttgtgattcaacctttcagc
ccattagcacctgagccagtgctttctggagctcacacctggcgctcactcatccatcac
attaggctgatgtccttgcccattgccaagaagtacatgtcagaaaataagggagttcct
ctgcatgggggtgatgaagacagaccctttccagactttgacccctggtggacaaacgac
tgtgagcagaatgagtcagagcccattcctgccaactgcactggctgtgcccagaaacac
ctgaaggtgatgctcctggaagacgccccaaggaaatttgagaggctccatccactggtg
atcaagatgcataagatgcctgacctatttatcattggcagcggtgaggccatgttgcag
ctcatccctcccttccagtgccgaagacattgtcagtctgtggccatgccaatagagcca
ggggatatcggctatgtcgacaccacccactggaaggtctacgttatagccagaggggtc
cagcctttggtcatctgcgatggaaccgctttctcagaactgtag

>gi568815592f:36799445_37023438|GENSCAN_predicted_peptide_4|506_aa
MHGSCSFLMLLLPLLLLLVATTGPVGALTDEEKRLMVELHNLYRAQVSPTASDMLHMRWD
EELAAFAKAYARQCVWGHNKERGRRGENLFAITDEGMDVPLAMEEWHHEREHYNLSAATC
SPGQMCGHYTQVVWAKTERIGCGSHFCEKLQGVEETNIELLVCNYEPPGNVKGKRPYQEG
TPCSQCPSGYHCKNSLCGESTGGWPPTRSHFGALSFQVAGFQPFKGRMLESLAASGGPAR
EPIGSPEDAQDLPYLVTEAPSFRATEASDSRKMGTPSSLATGIPAFLVTEVSGSLATKAL
PAVETQAPTSLATKDPPSMATEAPPCVTTEVPSILAAHSLPSLDEEPVTFPKSTHVPIPK
SADKVTDKTKVPSRSPENSLDPKMSLTGARELLPHAQEEAEAEAELPPSSEVLASVFPAQ
DKPGELQATLDHTGHTSSKSLPNFPNTSATANATGGRALALQSSLPGAEGPDKPSVVSGL
NSGPGHVWGPLLGLLLLPPLVLAGIF

>gi568815592f:36799445_37023438|GENSCAN_predicted_CDS_4|1521_bp
atgcacggctcctgcagtttcctgatgcttctgctgccgctactgctactgctggtggcc
accacaggccccgttggagccctcacagatgaggagaaacgtttgatggtggagctgcac
aacctctaccgggcccaggtatccccgacggcctcagacatgctgcacatgagatgggac
gaggagctggccgccttcgccaaggcctacgcacggcagtgcgtgtggggccacaacaag
gagcgcgggcgccgcggcgagaatctgttcgccatcacagacgagggcatggacgtgccg
ctggccatggaggagtggcaccacgagcgtgagcactacaacctcagcgccgccacctgc
agcccaggccagatgtgcggccactacacgcaggtggtatgggccaagacagagaggatc
ggctgtggttcccacttctgtgagaagctccagggtgttgaggagaccaacatcgaatta
ctggtgtgcaactatgagcctccggggaacgtgaaggggaaacggccctaccaggagggg
actccgtgctcccaatgtccctctggctaccactgcaagaactccctctgtggtgagtcc
acgggtggatggccccccacgcgcagccactttggcgccctgtcgttccaagtggccgga
tttcaacccttcaaagggaggatgttagaaagtctggcggcttcgggggggcccgcgcga
gaacccatcggaagcccggaagatgctcaggatttgccttacctggtaactgaggcccca
tccttccgggcgactgaagcatcagactctaggaaaatgggtactccttcttccctagca
acggggattccggctttcttggtaacagaggtctcaggctccctggcaaccaaggctctg
cctgctgtggaaacccaggccccaacttccttagcaacgaaagacccgccctccatggca
acagaggctccaccttgcgtaacaactgaggtcccttccattttggcagctcacagcctg
ccctccttggatgaggagccagttaccttccccaaatcgacccatgttcctatcccaaaa
tcagcagacaaagtgacagacaaaacaaaagtgccctctaggagcccagagaactctctg
gaccccaagatgtccctgacaggggcaagggaactcctaccccatgcccaggaggaggct
gaggctgaggctgagttgcctccttccagtgaggtcttggcctcagtttttccagcccag
gacaagccaggtgagctgcaggccacactggaccacacggggcacacctcctccaagtcc
ctgcccaatttccccaatacctctgccaccgctaatgccacgggtgggcgtgccctggct
ctgcagtcgtccttgccaggtgcagagggccctgacaagcctagcgtcgtgtcagggctg
aactcgggccctggtcatgtgtggggccctctcctgggactactgctcctgcctcctctg
gtgttggctggaatcttctga

>gi568815592f:36799445_37023438|GENSCAN_predicted_peptide_5|389_aa
MAGAGAGAGARGGAAAGVEARARDPPPAHRAHPRHPRPAAQPSARRMDGGSGGLGSGDNA
PTTEALFVALGAGVTALSHPLLYVKLLIQVGHEPMPPTLGTNVLGRKVLYLPSFFTYAKY
IVQVDGKIGLFRGLSPRLMSNALSTVTRGSMKKVFPPDEIEQVSNKDDMKTSLKKVVKET
SYEMMMQCVSRMLAHPLHVISMRCMVQFVGREAKYSGLIPHLLGDVVFLWGCNLLAHFIN
AYLVDDSVSDTPGGLGNDQNPGSQARIRLWVSGCMSVLALTACQALDVDQADTGSALEAH
SPFSQALAIRSYTKFVMGIAVSMLTYPFLLVGDLMAVNNCGLQAGLPPYSPVFKSWIHCW
KYLSVQGQLFRGSSLLFRRVSSGSCFALE

>gi568815592f:36799445_37023438|GENSCAN_predicted_CDS_5|1170_bp
atggcgggagccggagctggagccggagctcgcggcggagcggcggcgggggtcgaggct
cgagctcgcgatccaccgcccgcgcaccgcgcacatcctcgccaccctcggcctgcggct
cagccctcggcccgcaggatggatggcgggtcagggggcctggggtctggggacaacgcc
ccgaccactgaggctcttttcgtggcactgggcgcgggcgtgacggcgctcagccatccc
ctgctctacgtgaagctgctcatccaggtgggtcatgagccgatgccccccacccttggg
accaatgtgctggggaggaaggtcctctatctgccgagcttcttcacctacgccaagtac
atcgtgcaagtggatggtaagatagggctgttccgaggcctgagtccccggctgatgtcc
aacgccctctctactgtgactcggggtagcatgaagaaggttttccctccagatgagatt
gagcaggtttccaacaaggatgatatgaagacttccctgaagaaagttgtgaaggagacc
tcctacgagatgatgatgcagtgtgtgtcccgcatgttggcccaccccctgcatgtcatc
tcaatgcgctgcatggtccagtttgtgggacgggaggccaagtacagtggattaatccct
cacctcctgggcgatgtggttttcttgtggggctgtaacctgctggcccacttcatcaat
gcctacctggtggatgacagcgtgagtgacaccccaggggggctgggaaacgaccagaat
ccaggttcccaggccaggattcgtctttgggtttcagggtgcatgtctgtcttagcactg
actgcgtgccaagccctggatgttgatcaggcagacacgggctcagcccttgaggctcac
agtccgttcagccaggccctggccatccggagctataccaagttcgtgatggggattgca
gtgagcatgctgacctaccccttcctgctagttggcgacctcatggctgtgaacaactgc
gggctgcaagctgggctccccccttactccccagtgttcaaatcctggattcactgctgg
aagtacctgagtgtgcagggccagctcttccgaggctccagcctgcttttccgccgggtg
tcatcaggatcatgctttgccctggagtaa

>gi568815592f:36799445_37023438|GENSCAN_predicted_peptide_6|580_aa
MKGASEEKLASVSNLVTVFENSRTPEAAPRGQRLEDVHHRPECRPPESPGPREKTNVGEA
VGSEPRTVSRRYLNSLKNKLSSEAWRKSCQPVTLSGSGTQEPEKKIVQELLETEQAYVAR
LHLLDQAMSDLSWRLQVFFQELLKTARSSKAFPEDVVRVIFSNISSIYQFHSQFFLPELQ
RRLDDWTANPRIGDVIQKLAPFLKMYSEYVKNFERAAELLATWTDKSPLFQEVLTRIQSS
EASGSLTLQHHMLEPVQRIPRYELLLKEYIQKLPAQAPDQADAQKALDMIFSAAQHSNAA
ITEMERLQDLWEVYQRLGLEDDIVDPSNTLLREGPVLKISFRRNDPMERYLFLFNNMLLY
CVPRVIQVGAQFQVRTRIDVAGMKMHRNFFNQSSAERHLDCFQLSAAANEAAVNSLVREL
MDAEFPHSFLVSGKQRTLELQARSQEEMISWMQAFQAAIDQIEKRNETFKAAAQGPEGDI
QEQELQSEELGLRAPQWVRDKMVTMCMRCQEPFNALTRRRHHCRACGYCHPGLYLSHLGL
YLPYLGLYPPSSGAAVPILAKSAGFNQCSPVVLGTSSEPX

>gi568815592f:36799445_37023438|GENSCAN_predicted_CDS_6|1740_bp
atgaagggggcaagtgaggagaagctggcatctgtgtccaacctggtcactgtgtttgag
aatagcaggaccccagaagcagcacccagaggccagaggctagaggacgtgcatcaccgc
cctgagtgcaggcctcccgagtccccaggaccacgggagaagacgaatgtcggggaggcc
gtggggtctgagcccaggacagtcagcaggaggtacctgaactccctgaagaacaagctg
tccagcgaagcctggaggaaatcttgccagcctgtgaccctctcaggatcggggacgcag
gagccagagaagaagatcgtccaggagctgctggagacagagcaggcctatgtggcgcgc
ctccacctgctagaccaggccatgagtgacctgtcgtggcggctacaggtgtttttccag
gagctgctgaagacagcccgcagcagcaaggccttcccagaggatgtggtcagggtcatc
ttctccaacatctcctccatctatcagttccattctcagttcttcctcccagagctgcag
cggcgcctggacgactggacagctaacccccgcatcggtgacgtgatccagaagctggcc
cccttcctgaagatgtacagtgagtatgtcaagaactttgagcgagcggctgagctgctg
gccacctggaccgacaagtctccactcttccaggaggttctcactcgcatccagagcagc
gaggcttcgggcagcctgaccctgcagcaccacatgctggaaccagtgcagagaattcca
cgttacgagctgctgctcaaggagtacatccagaagctgccagcccaggccccagaccag
gccgatgcccagaaagccctggacatgatcttctcagctgcccagcactccaatgcagcc
atcactgagatggagcggctgcaggacctgtgggaggtgtaccagcgcctgggcctcgag
gacgacatagtagacccctctaacaccctgctccgtgagggcccggtcctcaagatctcc
ttccgccgcaacgaccccatggagcgctaccttttcttgttcaacaacatgctgctctac
tgtgtgcccagggtgatccaggtgggcgcccagttccaggtgaggacccgcatcgatgtg
gccgggatgaagatgcaccggaatttcttcaaccagtcttctgctgagagacacttagat
tgttttcagttgtcagcagctgcaaatgaggctgcagtgaatagcctggtgcgggagctg
atggatgctgagtttccccactccttcctggtgtccgggaagcagcgcaccctggagctg
caagcccggtcccaggaggaaatgatttcctggatgcaggccttccaagcagccattgac
caaatcgagaagcggaatgaaaccttcaaggctgcggcccaggggcctgagggagacatc
caggagcaggagctgcagtctgaggagctgggcctccgggcaccgcagtgggtccgggac
aagatggtgaccatgtgcatgcgctgccaggagcccttcaacgctctgacgcgccgtcgc
caccactgccgggcctgcggctattgtcacccaggcctctacctgtcccacttaggcctc
tacctgccctacctgggcctctacccacccagctcaggtgctgctgtccccatcttggcc
aaatctgctggcttcaaccaatgcagcccagtggtgttgggcactagctctgagccagnn