GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:56:03

Sequence gi568815586r:7958740_8160185 : 201446 bp : 43.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  42797  42889   93  1  0   62   84    82 0.496   5.58
 1.02 Intr +  51357  51472  116  2  2   43   60   161 0.568   8.05
 1.03 Intr +  56269  56500  232  1  1   62   31    74 0.186  -3.12
 1.04 Intr +  56551  56939  389  0  2  -34   36   455 0.351  21.69
 1.05 Intr +  60040  60139  100  1  1   55   69    97 0.546   4.61
 1.06 Intr +  60631  60692   62  0  2   71   86    20 0.282  -2.37
 1.07 Intr +  67621  67715   95  1  2   32   38   148 0.103   3.81
 1.08 Intr +  81080  81426  347  0  2  124   81   420 0.791  40.01
 1.09 Intr +  83919  83993   75  2  0  127  116    71 0.999  13.51
 1.10 Intr +  84962  85030   69  1  0   56   95    51 0.794   1.98
 1.11 Intr +  86021  86219  199  1  1   85  113   117 0.999  12.82
 1.12 Intr +  89143  89550  408  2  0  103   97   284 0.996  25.04
 1.13 Intr +  89958  90059  102  1  0   98   92    39 0.978   5.45
 1.14 Intr +  90623  90832  210  0  0   85   79   193 0.997  16.98
 1.15 Intr +  91783  91881   99  2  0   99  110    16 0.969   4.98
 1.16 Term +  94023  94111   89  1  2   98   39   127 0.950   6.62
 1.17 PlyA +  94766  94771    6                               1.05

 2.02 PlyA -  95708  95703    6                               1.05
 2.01 Sngl - 101368  99998 1371  1  0   58   48   461 0.754  33.23
 2.00 Prom - 103772 103733   40                              -5.36

 3.00 Prom + 105651 105690   40                              -7.06
 3.01 Init + 121210 121367  158  0  2   67   94    80 0.659   5.88
 3.02 Intr + 122895 123024  130  0  1   44   56    80 0.496   1.10
 3.03 Intr + 123385 123644  260  0  2   74   79   232 0.586  17.16
 3.04 Intr + 131197 131297  101  1  2  110   89    66 0.999   8.65
 3.05 Intr + 131456 131560  105  0  0   74   99   138 0.987  13.69
 3.06 Intr + 133030 133111   82  2  1   70   89    85 0.991   5.50
 3.07 Intr + 133937 134045  109  2  1   62   84   108 0.998   8.09
 3.08 Term + 137303 137419  117  1  0  117   55    56 0.670   3.74
 3.09 PlyA + 139108 139113    6                               1.05

 4.03 PlyA - 139136 139131    6                               1.05
 4.02 Term - 148971 148652  320  1  2   52   37   150 0.772   1.34
 4.01 Init - 154588 154456  133  1  1   78   75    59 0.449   3.90
 4.00 Prom - 166536 166497   40                              -4.56

 5.03 PlyA - 166928 166923    6                               1.05
 5.02 Term - 175583 175032  552  2  0   20   51   539 0.998  37.71
 5.01 Init - 176211 175615  597  0  0   72  -95   420 0.555  17.38
 5.00 Prom - 176278 176239   40                              -8.46

 6.00 Prom + 176583 176622   40                              -8.76
 6.01 Init + 176956 176997   42  0  0   72   80    30 0.921   1.02
 6.02 Intr + 178049 178164  116  1  2  149   94    90 0.862  14.95
 6.03 Term + 184928 185030  103  2  1   76   54   108 0.773   3.95
 6.04 PlyA + 186226 186231    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:7958740_8160185|GENSCAN_predicted_peptide_1|894_aa
MIGKLVTKKFEEDMQMDLSEWSKTVKIFVYHKLLPPPPAFGDHDPDQSAAINVEARPSTS
KKIVTRSRLSRPAEMLLPLPTVFPQMRLLSRVLAPHLTRAYAKDVKFGADARALMLQGVD
LLADAVAVTMGPKGRTVIIEQSWGSPQIQIRAKLVQDIANNTNEEAGNGTTSATVLARSI
AKEGFKKISKGANPVEIRKGVMLAVDAVIAELRKQSKFVTTPEEIAQVATTSANGDKEIG
NIISNAMKKVGRKGVITVKDGKTLNDELEIIESGWASRWDPLTASKSLGFDFEWSVNVVA
KRDSVHRALPGKAPADSTKVFWRDCSPPTQGFQKASVHADFGGSKQETIDPVQEMTLFEG
NEEPRSTMASDLESSLTSIDWLPQLTLRATIEKLGSASQAGPPGSSRKCSPGSPTDPNAT
LSKDEAAVHQDGKPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNS
IRHNLSLNKCFRKVPRPRDDPGKGSYWTIDTCPDISRKRRHPPDDDGTGSVDGGAVAAGA
SGRESAEGPPPLYNTNHDFKFSYSEINFQDLSWSFRNLYKSMLEKSSSSSQHGFSSLLGD
IPPSNNYYMYQQQQPPPPQQQQQQQQPPQPPPQQSQPQQQQAPAQGPSAVGGAPPLHTPS
TDGCTPPGGKQAGAEGYGPPPVMAMHPPPLQHGGYHPHQHHPHSHPAQQPPPPQPQAQGQ
APINNTGFAFPSDWCSNIDSLKESFKMVNRLNWSSIEQSQFSELMESLRQAEQKNWTLDQ
HHIANLCDSLNHFLTQTGHVPPQGGTHRPPAPARIADSCALTSGKQESAMSQVNSYGHPQ
APHLYPGPSPMYPIPTQDSAGYNRPAHHMVPRPSVPPPGANEEIPDDFDWDLIT

>gi568815586r:7958740_8160185|GENSCAN_predicted_CDS_1|2685_bp
atgattggaaaattggtgacaaagaaatttgaggaagacatgcagatggacctctctgag
tggtcaaaaactgtgaagatatttgtataccataaattgctaccaccacccccagccttc
ggcgaccacgaccctgatcagtcagcagccatcaacgttgaggcaagaccctccaccagc
aaaaagattgtgacacgctcaaggctcagccgccccgcagaaatgcttcttccgttaccc
acagtctttccccagatgagactgctgtccagggtactggcccctcatctcactcgggct
tatgccaaagatgtaaaatttggcgcagatgcccgagccttaatgcttcaaggtgtagac
cttttagccgatgctgtagctgttacgatggggccaaagggaagaacagtgattattgag
cagagctggggaagtccccaaatacaaattagagctaaacttgttcaagatattgctaat
aacacaaatgaagaggctggaaatggcaccacctctgctaccgtactggcacgctctatt
gccaaggagggcttcaagaagattagcaaaggtgctaatccagtggaaatcaggaaaggt
gtgatgttggctgttgatgctgtaattgctgaacttagaaagcagtctaaatttgtgacc
acccctgaagaaattgcacaggttgctacaacttctgcaaacggagacaaagaaattggc
aatatcatctccaatgcaatgaaaaaggttggaagaaagggtgtcatcacagtaaaggat
ggaaaaacactgaatgatgaattagaaattattgaaagtggctgggcgagccgctgggac
ccactaactgcctcgaaaagcctaggattcgactttgaatggtccgttaatgtggtcgca
aaacgtgactcggttcatcgggcgctccctggtaaggcccctgcagacagcacgaaggtg
ttttggagagattgttctcccccgacccaaggattccagaaagccagtgtacacgcagac
ttcggaggcagtaaacaggaaaccatcgatcccgtgcaggaaatgaccttgtttgaaggc
aacgaagaacccagaagtaccatggcttctgacctagagagtagcctcacctccatagac
tggctcccccagctgaccctccgagctaccattgagaagcttggaagtgcctcccaggct
gggcctcccgggagcagccgcaagtgttcaccagggtcacccacagatcctaatgccacc
ctgagcaaagacgaggcagcagtgcaccaggacggcaagccacgatacagctatgccact
ctcatcacctatgccatcaactcctctccagccaagaagatgaccctcagcgagatttac
cgctggatctgtgataacttcccctattacaagaatgctggcattggttggaagaattca
atacggcacaacctttctctcaacaagtgtttccggaaggtgcccagacctcgggatgac
cctgggaagggttcctattggacaattgacacctgccctgacatttcccgaaagagaaga
caccctccagatgatgatggcacaggatctgtggatggtggagcagtggcagcaggggct
tcaggccgagaaagtgctgagggtccccctcccctctataacaccaaccatgactttaaa
ttctcctactcagagatcaactttcaggatctaagctggtccttccgcaacctctataag
tccatgctggagaagtcctcttcctcctctcagcacggcttttcttctctcctgggggac
atcccaccctcgaacaactactacatgtatcagcagcagcagccaccgccacctcaacag
cagcagcagcagcagcagccgccacagccacctccccagcagtcccagccacagcagcag
caggcacctgcccagggcccctcagctgtagggggtgctcctccactgcacaccccaagc
acagatggttgtaccccaccagggggaaagcaagctggggcggaaggctatgggcctccc
cctgtaatggccatgcatccacccccgctgcagcatggaggctaccaccctcatcagcac
catccccactcccaccctgcccagcagccaccacctccacagccacaggcacaaggccag
gctcccatcaacaacactggctttgcctttccttctgactggtgctctaatattgactct
ttaaaggaaagcttcaagatggtgaatcggctcaattggtccagcattgagcagtcacaa
ttctcagaactgatggagagtctacgacaggcagagcagaagaactggaccctcgaccag
catcacattgccaatctgtgtgactccctcaaccacttccttactcagactggtcacgtg
ccccctcaagggggtacccaccgcccaccagcccctgcccgtattgctgactcctgtgcc
ctcaccagtggcaaacaggagtcagccatgagccaagtgaactcttatgggcacccacaa
gctccccacctctaccctggcccatcaccaatgtacccaatccccacccaggactcagca
ggatacaatcgcccagcacaccatatggtccctcggccatcagtgccacctcctggtgcc
aatgaggagatccctgatgacttcgactgggacttgatcacttag

>gi568815586r:7958740_8160185|GENSCAN_predicted_peptide_2|456_aa
MVILSLTFLLGLPGNGLVLWVAGLKMQRTVNTIWFLHLTLADLLCCLSLPFSLAHLALQG
QWPYGRFLCKLIPSIIVLNMFASVFLLTAISLDRCLVVFKPIWCQNHRNVGMACSICGCI
WVVAFVMCIPVFVYREIFTTDNHNRCGYKFGLSSSLDYPDFYGDPLENRSLENIVQPPGE
MNDRLDPSSFQTNDHPWTVPTVFQPQTFQRPSADSLPRGSARLTSQNLYSNVFKPADVVS
PKIPSGFPIEDHETSPLDNSDAFLSTHLKLFPSASSNSFYESELPQGFQDYYNLGQFTDD
DQVPTPLVAITITRLVVGFLLPSVIMIACYSFIVFRMQRGRFAKSQSKTFRVAVVVVAVF
LVCWTPYHIFGVLSLLTDPETPLGKTLMSWDHVCIALASANSCFNPFLYALLGKDFRKKA
RQSIQGILEAAFSEELTRSTHCPSNNVISERNSTTV

>gi568815586r:7958740_8160185|GENSCAN_predicted_CDS_2|1371_bp
atggtcattctcagccttacttttttactgggattgccaggcaatgggctggtgctgtgg
gtggctggcctgaagatgcagcggacagtgaacacaatttggttcctccacctcaccttg
gcggacctcctctgctgcctctccttgcccttctcgctggctcacttggctctccaggga
cagtggccctacggcaggttcctatgcaagctcatcccctccatcattgtcctcaacatg
tttgccagtgtcttcctgcttactgccattagcctggatcgctgtcttgtggtattcaag
ccaatctggtgtcagaatcatcgcaatgtagggatggcctgctctatctgtggatgtatc
tgggtggtggcttttgtgatgtgcattcctgtgttcgtgtaccgggaaatcttcactaca
gacaaccataatagatgtggctacaaatttggtctctccagctcattagattatccagac
ttttatggagatccactagaaaacaggtctcttgaaaacattgttcagccgcctggagaa
atgaatgataggttagatccttcctctttccaaacaaatgatcatccttggacagtcccc
actgtcttccaacctcaaacatttcaaagaccttctgcagattcactccctaggggttct
gctaggttaacaagtcaaaatctgtattctaatgtatttaaacctgctgatgtggtctca
cctaaaatccccagtgggtttcctattgaagatcacgaaaccagcccactggataactct
gatgcttttctctctactcatttaaagctgttccctagcgcttctagcaattccttctac
gagtctgagctaccacaaggtttccaggattattacaatttaggccaattcacagatgac
gatcaagtgccaacacccctcgtggcaataacgatcactaggctagtggtgggtttcctg
ctgccctctgttatcatgatagcctgttacagcttcattgtcttccgaatgcaaaggggc
cgcttcgccaagtctcagagcaaaacctttcgagtggccgtggtggtggtggctgtcttt
cttgtctgctggactccataccacatttttggagtcctgtcattgcttactgacccagaa
actcccttggggaaaactctgatgtcctgggatcatgtatgcattgctctagcatctgcc
aatagttgctttaatcccttcctttatgccctcttggggaaagattttaggaagaaagca
aggcagtccattcagggaattctggaggcagccttcagtgaggagctcacacgttccacc
cactgtccctcaaacaatgtcatttcagaaagaaatagtacaactgtgtga

>gi568815586r:7958740_8160185|GENSCAN_predicted_peptide_3|353_aa
MVGIYKTGVFWVGCDGKTKRKGNLRMLARELLKQGDGRNKEKANNVQNMKKNRNWVDPTY
SLFNRIKFSKKIIGIHAESVAKHFNRCRPEKSEIKSVSIWLPASPKRLISETNLNSRGSD
ATEVVALCISASRAPPPVLRFAPGSADSGPKMATELEYESVLCVKPDVSVYRIPPRASNR
GYRASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSS
RYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKL
DLGFKEGQTIKLCIGLCSKPGTTAIQLGPVLNGIGRTLRTDLRNKNDLEGTNL

>gi568815586r:7958740_8160185|GENSCAN_predicted_CDS_3|1062_bp
atggttggaatatataagactggagtcttttgggttggctgtgatggaaagacaaagagg
aaaggaaacttaaggatgctggcaagagaactgttgaaacaaggagatgggaggaataaa
gagaaggctaacaatgtgcagaacatgaagaagaacaggaattgggttgatcccacgtat
agtctatttaacaggatcaaattttccaaaaagataatcggaatacacgccgaaagtgtg
gcaaaacattttaacaggtgtcgtcctgaaaaatcggagataaagagtgtttcaatatgg
ctccccgcgtcaccgaaaaggttaatctcagaaactaacttgaactcgcgcggaagtgac
gcaacagaagttgtcgcgctttgcatctccgcctcccgtgctccgcctccggtcttacgt
ttcgcccccggcagcgccgacagcggacccaagatggcgaccgagttggagtacgagtct
gtgctgtgtgtgaagccagacgtcagcgtctaccggattccgccccgggcctccaaccgc
ggttacagggcctctgactggaaattagaccagcctgattggactggtcgcctccgaatc
acttcaaaagggaagactgcctatatcaaactcgaggataaagtttcaggggagctcttt
gctcaggcaccagtagaacaatatcctggtattgctgtggagacggtgacagattctagc
cgctactttgtaatccggatccaggatggtactgggcgcagtgctttcattggcattggc
ttcacagatcggggagatgccttcgactttaatgtctccttgcaggatcacttcaagtgg
gtaaagcaggaatctgagatttccaaggaatctcaagaaatggatgctcgtcctaagttg
gatctgggcttcaaggaaggacaaaccatcaagttgtgtatcgggctctgttccaaacca
ggcaccacagccatccaactgggtccagttctgaatggcattggcaggacattaaggaca
gacttgaggaataaaaatgaccttgagggcaccaatctgtga

>gi568815586r:7958740_8160185|GENSCAN_predicted_peptide_4|150_aa
MEYYAAIKNDEFMSFVGTWMKLVTIILSKLSQGQKTKHRMFSLTEIQKTLRDYYEHLYAH
KLENLEKLEMDKFLETCNLPRLTQEEIESLNRSITSSETESVIKSLPTRKGPGPGGFTAK
FYWMYKEEVPAELFLLKLFQKFEEEGLIAN

>gi568815586r:7958740_8160185|GENSCAN_predicted_CDS_4|453_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aaactggtaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcacagaaatacaaaaaaccctcagagactattatgaacacctctatgcacac
aaactagaaaacctagaaaaactagaaatggacaaattcttggaaacatgcaacctccca
agattgacccaggaagaaattgaatccctgaacagatcaataacaagttctgaaactgaa
tcagtaataaaaagcctaccaaccagaaaaggcccaggaccaggtggattcacagccaaa
ttctactggatgtataaagaagaggttcctgctgaactattcctactgaaactgttccaa
aaatttgaggaggaaggactcatcgctaactga

>gi568815586r:7958740_8160185|GENSCAN_predicted_peptide_5|382_aa
MLETNEKLESFSKELEDIKKNQDFTMLGAPSFPMAGHLASDFAFSPPPGGGGDGPGGPEP
GWVDPRTWLSFQGPPGGPGIGPGFGPGSEEWGIPPCPPPYEFCGGMAYCGPQTGVGLVPQ
DGLETSQPEGEAGVGVESNSDGASPEPCTVPSGAVKLEKEKLEQNPEESQDIKALQKELE
QFAKLLKQKRITLGYTQADVFSQTTICRFEALQLSFKNMCELRPLLQKWVEEADNNENLQ
EICKAETLVQARKRKRTSIENQVRGNLENLFLRCPKPTLQQISHIAQQLGLEKDVVRVWF
CNRRQKGKRSSSGYAQREDFEAVGSPFSGGPVSFPLAPGPHFGTPGYGSPHFTALYSSVP
FPEGEAFPPVSVTTLGSPMHSN

>gi568815586r:7958740_8160185|GENSCAN_predicted_CDS_5|1149_bp
atgcttgaaacaaatgaaaaactagaaagtttcagcaaagaactagaagatataaagaaa
aaccaagatttcaccatgcttggggcgccttccttccccatggcgggacacctggcttcg
gatttcgccttctcaccccctccaggcggtggaggtgatgggccaggggggccggagccg
ggctgggttgatcctcggacctggctaagcttccaaggccctcctggagggccaggaatc
gggccggggtttgggccaggctctgaggagtgggggattcccccatgtcccccgccgtat
gagttctgcggggggatggcgtactgtgggcctcagactggagtggggctagtgccccaa
gacggcttggagacctctcagcctgagggcgaagcaggagtcggggtggagagcaactcc
gatggggcctccccggagccctgcaccgtcccctctggtgccgtgaagctggagaaggag
aagctggagcaaaacccggaggagtcccaggacatcaaagctctgcagaaagaactcgag
caatttgccaagctcctgaagcagaagaggatcaccctgggatatacacaggccgatgtg
ttcagccaaacgaccatctgccgctttgaggctctgcagcttagcttcaagaacatgtgt
gagctgcggcccttgctgcagaagtgggtggaggaagctgacaacaatgaaaatcttcag
gagatatgcaaagcagaaaccctcgtgcaggcccgaaagagaaagcgaaccagtatcgag
aaccaagtgagaggcaacctggagaatttgttcctgcggtgcccgaaacccacactgcag
cagatcagccacatcgcccagcagcttgggctggagaaggatgtggtccgagtgtggttc
tgtaaccggcgccagaagggcaagcgatcaagcagtggctatgcacaacgagaggatttt
gaggctgttgggtctcctttctcagggggaccagtgtcctttcctctggccccagggccc
cattttggtaccccaggctatgggagccctcacttcactgcactgtactcctcggtccct
ttccctgagggggaagcctttccccctgtctccgtcaccactctgggctctcccatgcat
tcaaactga

>gi568815586r:7958740_8160185|GENSCAN_predicted_peptide_6|86_aa
MEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTGVDTVPH
SSRLMGLLYCSILDLEPLLECVLLYM

>gi568815586r:7958740_8160185|GENSCAN_predicted_CDS_6|261_bp
atggaggctcacctgctggtgataaacactcaagaagagcaggatttcatcttccagaat
ctgcaagaagaatctgcttattttgtggggctctcagatccagaaggtcagcgacattgg
caatgggttgatcagacaccatacaatgaaagttccacaggagttgacactgtgccccat
tcatcacggctgatggggctgctgtactgcagcatcttggacctggaaccactgctggag
tgtgtcctgctctacatgtga