Result of FASTA (ccds) for pF1KE0521
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0521, 276 aa
  1>>>pF1KE0521 276 - 276 aa - 276 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4522+/-0.000796; mu= 13.7305+/- 0.048
 mean_var=61.2129+/-12.210, 0's: 0 Z-trim(107.0): 17  B-trim: 0 in 0/50
 Lambda= 0.163928
 statistics sampled from 9276 (9286) to 9276 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.285), width:  16
 Scan time:  2.330

The best scores are:                                      opt bits E(32554)
CCDS13772.1 TANGO2 gene_id:128989|Hs108|chr22      ( 276) 1859 448.0 3.4e-126
CCDS63405.1 TANGO2 gene_id:128989|Hs108|chr22      ( 317) 1734 418.5  3e-117
CCDS63407.1 TANGO2 gene_id:128989|Hs108|chr22      ( 178) 1012 247.6 4.6e-66
CCDS63406.1 TANGO2 gene_id:128989|Hs108|chr22      ( 198)  892 219.3 1.8e-57
CCDS74821.1 TANGO2 gene_id:128989|Hs108|chr22      ( 201)  847 208.6 2.8e-54
CCDS63404.1 TANGO2 gene_id:128989|Hs108|chr22      ( 214)  842 207.5 6.8e-54
CCDS74822.1 TANGO2 gene_id:128989|Hs108|chr22      ( 107)  618 154.4 3.2e-38


>>CCDS13772.1 TANGO2 gene_id:128989|Hs108|chr22           (276 aa)
 initn: 1859 init1: 1859 opt: 1859  Z-score: 2379.1  bits: 448.0 E(32554): 3.4e-126
Smith-Waterman score: 1859; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)

               10        20        30        40        50        60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
              190       200       210       220       230       240

              250       260       270      
pF1KE0 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
       ::::::::::::::::::::::::::::::::::::
CCDS13 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
              250       260       270      

>>CCDS63405.1 TANGO2 gene_id:128989|Hs108|chr22           (317 aa)
 initn: 1734 init1: 1734 opt: 1734  Z-score: 2218.4  bits: 418.5 E(32554): 3e-117
Smith-Waterman score: 1734; 98.1% identity (100.0% similar) in 263 aa overlap (14-276:55-317)

                                10        20        30        40   
pF1KE0                  MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNN
                                     .....:::::::::::::::::::::::::
CCDS63 PGQGHSVWDAVRMPLGAGTPVNVQRREDSATEGSHRLILAANRDEFYSRPSKLADFWGNN
           30        40        50        60        70        80    

            50        60        70        80        90       100   
pF1KE0 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
           90       100       110       120       130       140    

           110       120       130       140       150       160   
pF1KE0 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
          150       160       170       180       190       200    

           170       180       190       200       210       220   
pF1KE0 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK
          210       220       230       240       250       260    

           230       240       250       260       270      
pF1KE0 YAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
          270       280       290       300       310       

>>CCDS63407.1 TANGO2 gene_id:128989|Hs108|chr22           (178 aa)
 initn: 1028 init1: 1012 opt: 1012  Z-score: 1299.6  bits: 247.6 E(32554): 4.6e-66
Smith-Waterman score: 1012; 100.0% identity (100.0% similar) in 150 aa overlap (127-276:29-178)

        100       110       120       130       140       150      
pF1KE0 TTDVDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLS
                                     ::::::::::::::::::::::::::::::
CCDS63   MAGHQHTWQAGSTHQLPAAAAGLAGPRASTAKGDVICYYGNRGEPDPIVLTPGTYGLS
                 10        20        30        40        50        

        160       170       180       190       200       210      
pF1KE0 NALLETPWRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NALLETPWRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEY
       60        70        80        90       100       110        

        220       230       240       250       260       270      
pF1KE0 VQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
      120       130       140       150       160       170        

>>CCDS63406.1 TANGO2 gene_id:128989|Hs108|chr22           (198 aa)
 initn: 892 init1: 892 opt: 892  Z-score: 1145.5  bits: 219.3 E(32554): 1.8e-57
Smith-Waterman score: 892; 96.4% identity (100.0% similar) in 137 aa overlap (14-150:55-191)

                                10        20        30        40   
pF1KE0                  MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNN
                                     .....:::::::::::::::::::::::::
CCDS63 PGQGHSVWDAVRMPLGAGTPVNVQRREDSATEGSHRLILAANRDEFYSRPSKLADFWGNN
           30        40        50        60        70        80    

            50        60        70        80        90       100   
pF1KE0 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
           90       100       110       120       130       140    

           110       120       130       140       150       160   
pF1KE0 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
       :::::::::::::::::::::::::::::::::::::::::::::::             
CCDS63 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPEPTLSSW      
          150       160       170       180       190              

           170       180       190       200       210       220   
pF1KE0 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK

>>CCDS74821.1 TANGO2 gene_id:128989|Hs108|chr22           (201 aa)
 initn: 1341 init1: 847 opt: 847  Z-score: 1087.9  bits: 208.6 E(32554): 2.8e-54
Smith-Waterman score: 1194; 72.5% identity (72.5% similar) in 276 aa overlap (1-276:1-201)

               10        20        30        40        50        60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
       ::::::                                                      
CCDS74 LIAADLR-----------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
                             ::::::::::::::::::::::::::::::::::::::
CCDS74 ----------------------QLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
                             130       140       150       160     

              250       260       270      
pF1KE0 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
       ::::::::::::::::::::::::::::::::::::
CCDS74 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
         170       180       190       200 

>>CCDS63404.1 TANGO2 gene_id:128989|Hs108|chr22           (214 aa)
 initn: 842 init1: 842 opt: 842  Z-score: 1081.0  bits: 207.5 E(32554): 6.8e-54
Smith-Waterman score: 1315; 77.5% identity (77.5% similar) in 276 aa overlap (1-276:1-214)

               10        20        30        40        50        60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
       :::::::::::::::::::::::::::::                               
CCDS63 WLGISTRGKLAALTNYLQPQLDWQARGRG-------------------------------
               70        80                                        

              130       140       150       160       170       180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
                                      :::::::::::::::::::::::::::::
CCDS63 -------------------------------TYGLSNALLETPWRKLCFGKQLFLEAVER
                                     90       100       110        

              190       200       210       220       230       240
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
      120       130       140       150       160       170        

              250       260       270      
pF1KE0 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
       ::::::::::::::::::::::::::::::::::::
CCDS63 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
      180       190       200       210    

>>CCDS74822.1 TANGO2 gene_id:128989|Hs108|chr22           (107 aa)
 initn: 615 init1: 615 opt: 618  Z-score: 799.6  bits: 154.4 E(32554): 3.2e-38
Smith-Waterman score: 618; 91.2% identity (92.2% similar) in 102 aa overlap (1-102:1-102)

               10        20        30        40        50        60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
       :::::::::::::::::::::::::::::   :.   : : :                  
CCDS74 WLGISTRGKLAALTNYLQPQLDWQARGRGSCQTRPSRTRVGSTCSPC             
               70        80        90       100                    

              130       140       150       160       170       180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER




276 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 02:02:29 2016 done: Thu Nov  3 02:02:29 2016
 Total Scan time:  2.330 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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