GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:44:57

Sequence gi568815580r:36696808_36928767 : 231960 bp : 40.23% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  12288  12584  297  1  0   67   59   270 0.668  17.92
 1.02 Intr +  21025  21908  884  2  2  107   79   808 0.100  71.91
 1.03 Intr +  23871  24125  255  2  0   26   57   174 0.004   4.82
 1.04 Intr +  28710  28895  186  2  0   90   29    87 0.165   1.96
 1.05 Intr +  33161  33331  171  1  0  122  100    21 0.962   5.92
 1.06 Intr +  33839  33997  159  1  0   34   78   220 0.996  14.86
 1.07 Intr +  35783  35859   77  1  2   12   64   129 0.402   0.29
 1.08 Intr +  40671  40794  124  0  1   55   36    97 0.109   0.87
 1.09 Intr +  43849  44031  183  0  0   49  121   175 0.309  15.96
 1.10 Intr +  45930  46049  120  2  0   43  101   103 0.976   6.87
 1.11 Intr +  47225  47386  162  1  0   47   95   123 0.516   8.15
 1.12 Intr +  50138  50328  191  1  2   87  111   106 0.489  10.26
 1.13 Intr +  51260  51345   86  2  2   80   20    38 0.550  -5.26
 1.14 Intr +  51799  52001  203  2  2   44   34   155 0.437   3.78
 1.15 Intr +  56416  56495   80  0  2   85   64    68 0.415   1.53
 1.16 Intr +  58312  58504  193  1  1   93   95   109 0.961  10.67
 1.17 Intr +  60964  61085  122  0  2   30   64   109 0.353   1.07
 1.18 Intr +  61933  62077  145  1  1   18   67   132 0.460   3.46
 1.19 Intr +  63801  63975  175  2  1   92   78   247 0.985  22.69
 1.20 Intr +  72458  72619  162  0  0   82   70   304 0.677  27.03
 1.21 Term +  76848  76915   68  1  2  124   46    57 0.273   2.22
 1.22 PlyA +  81186  81191    6                               1.05

 2.13 PlyA -  81275  81270    6                               1.05
 2.12 Term -  82634  82388  247  1  1   64   44   157 0.214   3.18
 2.11 Intr - 100243 100002  242  1  2   98   55   104 0.043   3.53
 2.10 Intr - 101802 101642  161  1  2   83  116   152 0.996  16.29
 2.09 Intr - 103504 103391  114  2  0   46  110    94 0.990   6.90
 2.08 Intr - 108695 108567  129  0  0   76   97    85 0.963   7.95
 2.07 Intr - 111127 111040   88  1  1   58  101   102 0.902   7.12
 2.06 Intr - 114168 114105   64  2  1  114  113    37 0.626   6.60
 2.05 Intr - 120320 120244   77  2  2   86   40    54 0.414  -2.21
 2.04 Intr - 122166 122087   80  1  2   94  108    80 0.486   8.95
 2.03 Intr - 124322 124205  118  2  1   46   57    82 0.456   0.02
 2.02 Intr - 127064 126996   69  2  0   63   96    70 0.478   3.76
 2.01 Init - 133339 133094  246  1  0   60   50   189 0.801   9.94
 2.00 Prom - 134321 134282   40                              -7.05

 3.00 Prom + 135207 135246   40                              -8.85
 3.01 Init + 136801 136876   76  0  1   90   56    24 0.749   0.70
 3.02 Intr + 138427 138569  143  2  2   26   92   172 0.796  10.55
 3.03 Term + 175147 175305  159  0  0   82   37    94 0.041   0.66
 3.04 PlyA + 175735 175740    6                               1.05

 4.02 PlyA - 176890 176885    6                               1.05
 4.01 Sngl - 179133 178744  390  0  0   67   43   161 0.848   5.47
 4.00 Prom - 180573 180534   40                              -6.15

 5.02 PlyA - 180764 180759    6                               1.05
 5.01 Sngl - 182336 182034  303  2  0   68   54   283 0.809  18.48
 5.00 Prom - 223377 223338   40                              -3.35


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  24010  23807  204  1  0   63   43   251 0.904  13.04
S.002 Term - 100243  99998  246  1  0   98   53   120 0.885   4.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:36696808_36928767|GENSCAN_predicted_peptide_1|1347_aa
XSAGDPEPESEAEPEAEAGAGQVADEAGQDIASAHEGAETEVEQALEQEPEERASLSEKE
RQNEGVNERDNCSASSVSSSSSTLEREEKEDKLSRDRTTGLWPAGVQDAGVNGQCGDILT
NKRFMLDMLYAHNRKSPDDEEKGDGEAGRTQQEAEAVASLATRISTLQANSQTQDESVRR
VDVGCLDNRGSVKAFAEKFNSGDLGRGSISPDAEPNDKVPETAPVQPKTESDYIWDQLMA
NPRELRIQDMDFTDLGEEDDIDVLDVDLGHREAPGPPPPPPPTFLGLPPPPPPPLLDSIP
PPPVPGNLLVPPPPVFNAPQGLGWSQVPRGQPTFTKKKKTIRLFWNEVRPFDWPCKNNRR
CREFLWSKLEPIKVDTSRLEHLFESKSKELSVSKNIPPPPPSPPPPPSLPPSSSPPPSSP
PAPSPPPPLPPPLPPPLPPLIAHLAGCTSRLFVVPDQVAGKKLPLDSVLGGIKWSKSMEG
SASWTVTENVLRLQAAGWYHTQVSKGISWLWCTCAVLTLGHSHISLGSCFPLAFSLPEKE
HASKLVRPLFILTSACPFLSFPWKAPLHSSTRQLHRGLSAQERWRCSGIRGMECLNGKKT
AADGKRQEIIVLDSKRSNAINIGLTVLPPPRTIKIAILNFDEYALNKEGIEGPLESRNPA
YRKSEGTRQTGAGDMKEWDTCQVVGKQGTLPPPISPDAQTPPEASVIGALVKGKLGREKI
LTMIPTDEEKQKIQEAQLANPEIPLGSAEQFLLTLSSISELSARLHLWAFKMDYETTEKE
VAEPLLDLKEGIDQLENNKTLGFILSTLLAIGNFLNGTNAKAFELSYLEKVPEVKDTVHK
QSLLHHVCTMVVENFPDSSDLYSEIGAITRSAKVDFDQLQDNLCQMERRCKASWDHLKAI
AKHEMKPVLKQRMSEFLKDCAERIIILKIVHRRIINRPLRKWQVVFKVGRDKNKKQNLPS
RLTTIPGHPDDGCSRLTCPHPTGDDQEEPEVHCGFGVGSKRGVAKGRWYPEVASPKYLNR
RTLCSNEVFSWSAALQALSSLASVSLQGSCTLHMVSGALRFHSFLLFMGHPPYAIREVNI
NKFCRIISEFALEYRTTRERVLQQKQKRANHRERNKTRGKMITDARITEQLIPHPVYKVG
PRANGDIDKATRGTYSLSAAFTLVRMWPAKPYGSQSRTLSARCTAASDVGGGQGIELADC
YLRDSPRRLARSRSGKFSGSSPAPPSQPQGLSYAEDAAEHENMKAVLKTSSPSVEDATPA
LGVRTRSRASRGSTSSWTMGTDDSPNVTDDAADEIMDRIVKSATQVPSQRVVPRERKRSR
ANRKSCCVSLLPKGQVADGNSLLPEGA

>gi568815580r:36696808_36928767|GENSCAN_predicted_CDS_1|4044_bp
ncaagtgccggggatcctgaacccgaatcagaggcagaaccggaagcagaggcaggggcg
gggcaggttgctgatgaagctggccaggacatagcctctgcccacgagggtgcagagact
gaagtggagcaggcactagagcaagagccggaagaaagagcctccctcagtgaaaaagag
aggcagaacgagggggtgaacgagagggacaactgctctgcctccagcgtctcgtcctcc
agcagcacgttggagagggaggagaaggaggacaagctctccagggacaggacaactggt
ttgtggcccgcaggtgtccaggatgcaggtgtaaatggacagtgtggcgacatcctcacc
aacaaacggttcatgcttgacatgctgtatgcccataacaggaagtctccggatgatgag
gagaagggggatggggaggctgggaggacccagcaggaggcagaggcggtagccagcctt
gctaccaggatatccaccctgcaggccaactctcagacccaggatgagagtgtcaggagg
gtggatgtcggctgtttggacaatcggggcagtgtgaaagcatttgctgagaaattcaac
agtggggacctggggagaggttccatctcccctgatgctgagcccaatgacaaggtccca
gaaacagcgccggtgcagccgaagacagagtctgattacatctgggaccagctcatggcc
aatccaagagagctcagaatccaagacatggatttcactgacctgggggaggaggatgac
attgatgtcctagatgtggacctgggtcacagggaggcccctgggccacctcccccaccc
ccacccacctttctgggtttgccgcccccaccccctccgcccctgttggacagcattcct
ccccctcctgtccctggtaatttattggttcctcctcctccagtgttcaacgctcctcag
ggcttagggtggtcccaggtacccaggggtcagcccacattcactaagaaaaagaagacc
atccgtttgttctggaatgaagttcggccttttgactggccatgtaaaaacaaccgacgc
tgcagagaattcctgtggtcaaaactggaacccattaaggtggacacttccagactggag
cacctgtttgagtctaaatccaaggaactgtctgtctcaaagaatattcctcctccccct
ccttctcctcctcctcctccttctcttcctccttcttcttctcctcctccttcttctcct
cctgctccttctcctcctcctcctcttcctcctcctcttcctcctcctcttcctcccctc
attgcccacttggctggctgcacctctaggcttttcgtggttcccgatcaggttgctggg
aagaagctgccccttgactcagtattgggaggaataaaatggagtaaaagtatggagggt
tcagcatcatggaccgtcactgagaatgtcttgagactccaggcagcagggtggtatcat
acccaagtcagcaaggggatctcctggctgtggtgtacttgtgccgtgctgacacttggc
cattcccacatcagcctgggttcctgctttcccctggccttttcccttcctgagaaggaa
catgcctctaagctggttcgtcccctattcatcctcaccagtgcatgccctttcctttct
tttccttggaaggctcctcttcattcatctaccaggcagctgcacagaggcctaagtgca
caggaaaggtggaggtgctctggtataaggggcatggaatgtttgaatggcaagaaaact
gctgcagatggaaaaaggcaagagatcattgttctggattccaagaggagtaacgccatc
aatattggtctgacggtgctgccccctccaaggacgattaagatcgccattttgaatttt
gatgagtatgccttaaacaaagaaggaatcgagggcccactcgaatccaggaatccagcc
tatcgaaagagtgagggcacacggcagaccggagcaggggacatgaaggagtgggacacg
tgccaggttgtgggcaagcaaggaacactgccaccacctatctctccagatgctcaaact
ccacctgaagcctcagtgattggagccctggtgaagggaaagttgggaagggagaaaatt
ctaacgatgattcccaccgatgaggagaagcagaaaatccaggaagctcagctggccaac
cctgaaatccccctgggcagtgcagagcagttcctcctcaccctgtcctccatcagcgag
ctctctgcacgacttcacctctgggcattcaaaatggattatgaaactacagaaaaggaa
gtagcagaaccactcctggacctgaaggaaggaatagaccagttggagaacaataaaacc
ttgggctttatcctgtctactctcttagccattgggaactttctaaatggaactaatgcc
aaagcgtttgagttaagctacctcgagaaggttccagaagtcaaagacacagtgcacaag
cagtcgcttctccaccatgtgtgcaccatggtggtagaaaacttcccagacagctccgat
ctgtactcggagatcggggccatcaccaggtcagccaaggttgactttgatcaacttcag
gataatttatgtcagatggagagaagatgcaaagcttcatgggatcacctcaaggcaatt
gcaaaacatgaaatgaaaccagttttaaaacaacggatgtcagagttcctgaaagactgt
gcagagcgaattataattttaaagattgtccatagaaggataatcaacagaccactgaga
aaatggcaagtagtttttaaagttggacgggacaaaaataagaagcagaatcttccctcc
aggttgacaactatccctggtcacccagatgatggctgctcccgcctcacctgtccacat
cctactggggatgaccaggaggagccagaagttcactgtggttttggtgtgggtagtaaa
aggggcgtggctaaagggaggtggtacccggaagtggccagtccaaagtatctaaaccgt
agaaccctgtgttcaaatgaagtctttagctggagcgctgccctgcaggctctcagttcc
ttggcctctgtgtccctccagggctcctgcacactacacatggtgtctggggctctgaga
ttccactcctttttactctttatgggccatccaccttatgcaattcgggaagtgaacata
aacaaattctgcaggattattagtgaatttgcactagagtatcgcacaaccagggaaagg
gttttgcagcagaaacagaaacgggccaaccacagagagagaaataagaccagagggaag
atgatcaccgatgccaggatcactgagcaactaattcctcatcctgtgtacaaagttggt
cctagagcaaatggtgacatagacaaggcaacacgaggcacctacagcctttctgccgca
ttcacactcgtgaggatgtggccagccaagccatatggttcacagagcaggacactctca
gcacgatgcacagctgcgagtgacgttggtggtggtcagggaatcgagttagctgactgt
tacctcagggacagccccagaagattggcccggagccgttctggcaagttctccggcagt
tctccggcgcccccaagccagccgcagggtctgagctatgcggaggacgcggctgagcac
gagaacatgaaggctgtgctgaaaacctcgtccccctccgtggaggacgccacccccgcg
ctgggcgtccgcacacgcagccgagcaagccgaggatccactagttcctggactatggga
actgatgactcgcccaatgtcacagatgatgcagctgatgagatcatggaccgcatcgtc
aagtcagccacccaagtgcccagtcagcgagtggtgccgagggagaggaaacgatcccgg
gccaaccggaaatcttgctgtgtctcactgctgcccaagggacaagttgctgatgggaat
tcgttgctgcctgaaggtgcttag

>gi568815580r:36696808_36928767|GENSCAN_predicted_peptide_2|544_aa
MPSDSAKGNSNASINAITNPSKHKKSCLCKHSVTQIAVPLSSNPSKEREVNYQDQSSSEK
SLPTPRKETLLSHKHLITAAELDCEDDEIPHLDYVTLNGKSKIIQGKALTGQLQTQEVGE
IDSPLNEKCYGHAGKEGIDSTHLWKSSPGVTEVTIIEKPPAERHMISSWEQPIIGKENSR
TVAMKLLLADPVNTCSCWEVASKSEGNNGVQDCPGVEKKNNCVMPEDVKNFYLMTNGFHM
TWSVKLDEHIIPLGSMAINSISKLTQLTQSSMYSLPNAPTLADLEDDTHEASDDQPEKPH
FDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYRLLI
THLGLPQWQYAFTSYGISPQAKQWFSMYKPITYNTNLLTEETDSFVNKLDPSKVFKSKNK
IVIPKKKGPVQPAGGQKGPSGPSGPSTSSTSKSSSGSGNPTRNGGAGHTQRDEKKRKYEQ
QGTGQSRLQSPLLPRDFQRSQRVHTLYLPALAEVPCSLSARTKVWGYTGWPNNATGADLE
GREE

>gi568815580r:36696808_36928767|GENSCAN_predicted_CDS_2|1635_bp
atgcccagtgattctgccaaaggtaacagcaacgcctcaattaatgccatcaccaatcct
agcaaacacaaaaagagctgcctctgcaagcactcagtaacacagattgccgtccctctt
tcaagtaacccctctaaggaacgtgaagtaaattatcaggaccaaagctcaagcgagaag
agtctacctactccaaggaaagaaacactcctgtcacacaaacatctcatcactgctgct
gaactggactgtgaagatgatgagataccacaccttgattatgttacattaaatggcaaa
agcaagattatccagggcaaggcactcacaggccaactccaaactcaagaagttggagaa
atagactcacctctcaatgagaagtgctatgggcatgcagggaaggaaggaattgacagc
acccacctttggaaatcttccccaggtgtgactgaggtgaccatcatagaaaagcctcct
gctgaacgtcatatgatttcttcctgggaacaacccatcataggaaaagaaaattccaga
acagtggctatgaaactcttattggctgatcctgtcaacacctgttcctgttgggaagtg
gcctctaaaagtgaggggaataatggggtgcaggattgtccaggagtagaaaagaagaat
aactgtgtgatgcctgaagatgtgaagaacttttacctgatgaccaatggcttccacatg
acatggagtgtgaagctggatgagcacatcattccactgggaagcatggcaattaacagc
atctcaaaactgactcagctcacccagtcttccatgtattcacttcctaatgcacccact
ctggcagacctggaggacgatacacatgaagccagtgatgatcagccagagaagcctcac
tttgactctcgcagtgtgatatttgagctggattcatgcaatggcagtgggaaagtttgc
cttgtctacaaaagtgggaaaccagcattagcagaagacactgagatctggttcctggac
agagcgttatactggcattttctcacagacacctttactgcctattaccgcctgctcatc
acccacctgggcctgccccagtggcaatatgccttcaccagctatggcattagcccacag
gccaagcaatggttcagcatgtataaacctatcacctacaacacaaacctgctcacagaa
gagaccgactcctttgtgaataagctagatcccagcaaagtgtttaagagcaagaacaag
atcgtaatcccaaaaaagaaagggcctgtgcagcctgcaggtggccagaaagggccctca
ggaccctccggtccctccacttcctccacttctaaatcctcctctggctctggaaacccc
acccggaatggtggtgcaggtcacacccaaagggatgagaagaaaaggaagtatgagcag
caaggcacagggcagtcaagactccagtccccccttctccccagggacttccagagaagc
cagagggttcacactctgtaccttcctgctcttgctgaagtgccctgcagtctgtctgcc
aggacaaaagtttggggctacacaggctggcctaacaatgccacaggtgctgatttggag
ggccgagaggagtga

>gi568815580r:36696808_36928767|GENSCAN_predicted_peptide_3|125_aa
MHRSDREQLGAYCNNPGRGKVELDQGISAEGNVRSRHKLMSPKADVKLKTSRVTDASISM
ESLKGTGDSVDEQAPLGESPDQASILLDAWGKETVVAMEKKQSSWVLLLYLPCVTKNIVS
GRRAT

>gi568815580r:36696808_36928767|GENSCAN_predicted_CDS_3|378_bp
atgcacagaagtgacagagagcagttaggagcttattgcaataatcctgggagaggaaaa
gttgagttggatcaaggaatttctgctgaaggaaatgtcagatcaagacacaagctgatg
agtccaaaagctgatgttaaacttaagacttccagggtgactgatgcttcaatctccatg
gagtccttaaaaggcacaggagattcagtagatgaacaggccccacttggtgagagccct
gatcaagcatcaatcttgctcgatgcctgggggaaggaaacagtagttgccatggaaaag
aaacaaagttcctgggtccttctcctctatcttccctgtgtaacaaaaaacatagtttca
ggaagacgagcaacataa

>gi568815580r:36696808_36928767|GENSCAN_predicted_peptide_4|129_aa
MTKTTITSIDAEKAFDKIQHPFMLKTLNTLGTDGMYLKIIRAIYDKPIANIILIGEKLEA
FPLKTCTRQGCPLSPLLFNIVLEVLARAIRQEKEINGIRREEEEVKLSLFADDRIAYLLN
PHCLSPKTP

>gi568815580r:36696808_36928767|GENSCAN_predicted_CDS_4|390_bp
atgacaaaaaccacgattacctcaatagatgcagaaaaggccttcgataaaattcaacac
cctttcatgctaaaaacactcaatacactaggtaccgatggaatgtatctcaaaataata
agggctatttatgacaaacccatagccaatatcatactgattggggaaaagctggaagca
ttccctttgaaaacctgcacaagacaaggatgccctctctcaccactcctattcaacata
gtattggaagttctggccagggcaatcaggcaagagaaagaaataaatggtattcgaaga
gaagaagaggaagtcaaattgtctctgtttgcagatgacaggattgcatatttattaaac
ccccattgtctcagcccaaaaactccttaa

>gi568815580r:36696808_36928767|GENSCAN_predicted_peptide_5|100_aa
MRKNQHKKAENSKNQNASSPPKDHNSSPARQQNRTKNEFDELTEVGFRRWVITNSSELKE
HVLTQCKEAKNLDKRLQELLTRITSSEKNINDLMELKNTA

>gi568815580r:36696808_36928767|GENSCAN_predicted_CDS_5|303_bp
atgaggaaaaaccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcct
ccaaaggatcacaactcctcaccagcaaggcaacaaaaccggacaaagaatgagtttgac
gaattgacagaagtaggcttcagaaggtgggtaataacaaactcctctgagctaaaggag
catgttctaacccaatgcaaggaagctaagaaccttgataaaaggttacaggaactgcta
actagaataaccagctcagagaagaacataaatgacctgatggagctgaaaaacacagca
tga