Result of FASTA (omim) for pF1KE0210
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0210, 270 aa
  1>>>pF1KE0210 270 - 270 aa - 270 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2781+/-0.00036; mu= 14.9149+/- 0.022
 mean_var=64.5556+/-13.041, 0's: 0 Z-trim(112.8): 8  B-trim: 46 in 1/53
 Lambda= 0.159627
 statistics sampled from 21920 (21928) to 21920 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.257), width:  16
 Scan time:  7.330

The best scores are:                                      opt bits E(85289)
NP_065108 (OMIM: 610775) fructose-2,6-bisphosphata ( 270) 1770 416.3 2.9e-116
NP_001715 (OMIM: 222800,613896) bisphosphoglycerat ( 259)  145 42.1  0.0013
NP_001280014 (OMIM: 222800,613896) bisphosphoglyce ( 259)  145 42.1  0.0013
XP_011514829 (OMIM: 222800,613896) PREDICTED: bisp ( 259)  145 42.1  0.0013
NP_954655 (OMIM: 222800,613896) bisphosphoglycerat ( 259)  145 42.1  0.0013
NP_000281 (OMIM: 261670,612931) phosphoglycerate m ( 253)  140 40.9  0.0028


>>NP_065108 (OMIM: 610775) fructose-2,6-bisphosphatase T  (270 aa)
 initn: 1770 init1: 1770 opt: 1770  Z-score: 2208.2  bits: 416.3 E(85289): 2.9e-116
Smith-Waterman score: 1770; 100.0% identity (100.0% similar) in 270 aa overlap (1-270:1-270)

               10        20        30        40        50        60
pF1KE0 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNVKFTHAFSSDLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNVKFTHAFSSDLM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 RTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAAREECPVFTPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAAREECPVFTPP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 GGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPLGKNHSSKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPLGKNHSSKV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 NSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPNTGMSLFII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPNTGMSLFII
              190       200       210       220       230       240

              250       260       270
pF1KE0 NFEEGREVKPTVQCICMNLQDHLNGLTETR
       ::::::::::::::::::::::::::::::
NP_065 NFEEGREVKPTVQCICMNLQDHLNGLTETR
              250       260       270

>>NP_001715 (OMIM: 222800,613896) bisphosphoglycerate mu  (259 aa)
 initn:  98 init1:  67 opt: 145  Z-score: 186.0  bits: 42.1 E(85289): 0.0013
Smith-Waterman score: 154; 24.8% identity (53.1% similar) in 258 aa overlap (1-250:1-231)

               10        20        30        40          50        
pF1KE0 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSD
       :... : ..::::  .:::. . .  ::. :.  :...:   :  :.  : .:  .:.: 
NP_001 MSKYKLIMLRHGEGAWNKENRFCSW-VDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSV
               10        20         30        40        50         

       60        70         80        90            100       110  
pF1KE0 LMRTKQTMHGILERSKFCKD-MTVKYDSRLRERKYGVVEG-----KALSELRAMAKAARE
       : :. .:   :::  .. .. . :. . :: ::.::.. :      ::.. . ...  :.
NP_001 LNRSIHTAWLILE--ELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRR
      60        70          80        90       100       110       

            120       130       140       150       160       170  
pF1KE0 ECPVFTPPGGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPL
          :  ::  :.    .    :    .:.. :   ::  .      :. :.  : ...: 
NP_001 SYNVTPPPIEESHPYYQEIYNDRRYKVCDVPL---DQLPR------SESLKDVLERLLPY
       120       130       140          150             160        

            180       190       200       210       220       230  
pF1KE0 GKNHSSKVNSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPN
        ..   ..  .  . :   ..:. .::   :.:. ..           .:  .....:  
NP_001 WNE---RIAPEV-LRG--KTILISAHGNSSRALLKHL---------EGISDEDIINITLP
      170           180         190                200       210   

            240       250       260       270        
pF1KE0 TGMSLFIINFEEGREVKPTVQCICMNLQDHLNGLTETR        
       ::. ...   :. : : :                            
NP_001 TGVPILLELDENLRAVGPHQFLGDQEAIQAAIKKVEDQGKVKQAKK
           220       230       240       250         

>>NP_001280014 (OMIM: 222800,613896) bisphosphoglycerate  (259 aa)
 initn:  98 init1:  67 opt: 145  Z-score: 186.0  bits: 42.1 E(85289): 0.0013
Smith-Waterman score: 154; 24.8% identity (53.1% similar) in 258 aa overlap (1-250:1-231)

               10        20        30        40          50        
pF1KE0 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSD
       :... : ..::::  .:::. . .  ::. :.  :...:   :  :.  : .:  .:.: 
NP_001 MSKYKLIMLRHGEGAWNKENRFCSW-VDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSV
               10        20         30        40        50         

       60        70         80        90            100       110  
pF1KE0 LMRTKQTMHGILERSKFCKD-MTVKYDSRLRERKYGVVEG-----KALSELRAMAKAARE
       : :. .:   :::  .. .. . :. . :: ::.::.. :      ::.. . ...  :.
NP_001 LNRSIHTAWLILE--ELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRR
      60        70          80        90       100       110       

            120       130       140       150       160       170  
pF1KE0 ECPVFTPPGGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPL
          :  ::  :.    .    :    .:.. :   ::  .      :. :.  : ...: 
NP_001 SYNVTPPPIEESHPYYQEIYNDRRYKVCDVPL---DQLPR------SESLKDVLERLLPY
       120       130       140          150             160        

            180       190       200       210       220       230  
pF1KE0 GKNHSSKVNSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPN
        ..   ..  .  . :   ..:. .::   :.:. ..           .:  .....:  
NP_001 WNE---RIAPEV-LRG--KTILISAHGNSSRALLKHL---------EGISDEDIINITLP
      170           180         190                200       210   

            240       250       260       270        
pF1KE0 TGMSLFIINFEEGREVKPTVQCICMNLQDHLNGLTETR        
       ::. ...   :. : : :                            
NP_001 TGVPILLELDENLRAVGPHQFLGDQEAIQAAIKKVEDQGKVKQAKK
           220       230       240       250         

>>XP_011514829 (OMIM: 222800,613896) PREDICTED: bisphosp  (259 aa)
 initn:  98 init1:  67 opt: 145  Z-score: 186.0  bits: 42.1 E(85289): 0.0013
Smith-Waterman score: 154; 24.8% identity (53.1% similar) in 258 aa overlap (1-250:1-231)

               10        20        30        40          50        
pF1KE0 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSD
       :... : ..::::  .:::. . .  ::. :.  :...:   :  :.  : .:  .:.: 
XP_011 MSKYKLIMLRHGEGAWNKENRFCSW-VDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSV
               10        20         30        40        50         

       60        70         80        90            100       110  
pF1KE0 LMRTKQTMHGILERSKFCKD-MTVKYDSRLRERKYGVVEG-----KALSELRAMAKAARE
       : :. .:   :::  .. .. . :. . :: ::.::.. :      ::.. . ...  :.
XP_011 LNRSIHTAWLILE--ELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRR
      60        70          80        90       100       110       

            120       130       140       150       160       170  
pF1KE0 ECPVFTPPGGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPL
          :  ::  :.    .    :    .:.. :   ::  .      :. :.  : ...: 
XP_011 SYNVTPPPIEESHPYYQEIYNDRRYKVCDVPL---DQLPR------SESLKDVLERLLPY
       120       130       140          150             160        

            180       190       200       210       220       230  
pF1KE0 GKNHSSKVNSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPN
        ..   ..  .  . :   ..:. .::   :.:. ..           .:  .....:  
XP_011 WNE---RIAPEV-LRG--KTILISAHGNSSRALLKHL---------EGISDEDIINITLP
      170           180         190                200       210   

            240       250       260       270        
pF1KE0 TGMSLFIINFEEGREVKPTVQCICMNLQDHLNGLTETR        
       ::. ...   :. : : :                            
XP_011 TGVPILLELDENLRAVGPHQFLGDQEAIQAAIKKVEDQGKVKQAKK
           220       230       240       250         

>>NP_954655 (OMIM: 222800,613896) bisphosphoglycerate mu  (259 aa)
 initn:  98 init1:  67 opt: 145  Z-score: 186.0  bits: 42.1 E(85289): 0.0013
Smith-Waterman score: 154; 24.8% identity (53.1% similar) in 258 aa overlap (1-250:1-231)

               10        20        30        40          50        
pF1KE0 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSD
       :... : ..::::  .:::. . .  ::. :.  :...:   :  :.  : .:  .:.: 
NP_954 MSKYKLIMLRHGEGAWNKENRFCSW-VDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSV
               10        20         30        40        50         

       60        70         80        90            100       110  
pF1KE0 LMRTKQTMHGILERSKFCKD-MTVKYDSRLRERKYGVVEG-----KALSELRAMAKAARE
       : :. .:   :::  .. .. . :. . :: ::.::.. :      ::.. . ...  :.
NP_954 LNRSIHTAWLILE--ELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRR
      60        70          80        90       100       110       

            120       130       140       150       160       170  
pF1KE0 ECPVFTPPGGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPL
          :  ::  :.    .    :    .:.. :   ::  .      :. :.  : ...: 
NP_954 SYNVTPPPIEESHPYYQEIYNDRRYKVCDVPL---DQLPR------SESLKDVLERLLPY
       120       130       140          150             160        

            180       190       200       210       220       230  
pF1KE0 GKNHSSKVNSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPN
        ..   ..  .  . :   ..:. .::   :.:. ..           .:  .....:  
NP_954 WNE---RIAPEV-LRG--KTILISAHGNSSRALLKHL---------EGISDEDIINITLP
      170           180         190                200       210   

            240       250       260       270        
pF1KE0 TGMSLFIINFEEGREVKPTVQCICMNLQDHLNGLTETR        
       ::. ...   :. : : :                            
NP_954 TGVPILLELDENLRAVGPHQFLGDQEAIQAAIKKVEDQGKVKQAKK
           220       230       240       250         

>>NP_000281 (OMIM: 261670,612931) phosphoglycerate mutas  (253 aa)
 initn: 118 init1:  68 opt: 140  Z-score: 179.9  bits: 40.9 E(85289): 0.0028
Smith-Waterman score: 160; 25.3% identity (54.1% similar) in 257 aa overlap (1-251:1-227)

               10        20        30          40        50        
pF1KE0 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQA--AAAGIFLNNVKFTHAFSSD
       ::   :..:::::. .:.:. . :   :  ::: : ..:  .: .:   ...:   ..: 
NP_000 MATHRLVMVRHGESTWNQENRFCGW-FDAELSEKGTEEAKRGAKAIKDAKMEFDICYTSV
               10        20         30        40        50         

       60        70        80        90       100       110        
pF1KE0 LMRTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAAREECPVFT
       : :. .:. .::. .     . :    :: ::.:: . :  :.. .. :: ..:.  .. 
NP_000 LKRAIRTLWAILDGTDQMW-LPVVRTWRLNERHYGGLTG--LNKAETAAKHGEEQVKIWR
      60        70         80        90         100       110      

      120       130       140       150       160         170      
pF1KE0 PPGGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNC--LETSLAEIFPLGKNH
           ...: .    .:  .   . : ::  .   .. :   .:  :. ..:. .:.    
NP_000 ----RSFD-IPPPPMDEKHPYYNSISKER-RYAGLKPGELPTCESLKDTIARALPFW---
            120        130       140        150       160          

        180       190         200       210       220       230    
pF1KE0 SSKVNSDSGIPGLAAS--VLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPNTG
            ..  .: . :.  ::...::  .:..  ..           .: . .: ..  ::
NP_000 -----NEEIVPQIKAGKRVLIAAHGNSLRGIVKHL---------EGMSDQAIMELNLPTG
            170       180       190                200       210   

          240       250       260       270       
pF1KE0 MSLFIINFEEGREVKPTVQCICMNLQDHLNGLTETR       
       .    : .: ..:.:::                          
NP_000 IP---IVYELNKELKPTKPMQFLGDEETVRKAMEAVAAQGKAK
              220       230       240       250   




270 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 21:09:39 2016 done: Thu Nov  3 21:09:40 2016
 Total Scan time:  7.330 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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