GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:09:26

Sequence gi568815597r:167819979_168035841 : 215863 bp : 38.86% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.25 PlyA -     43     38    6                              -0.45
 1.24 Term -    347     82  266  0  2   79   43   270 0.207  16.29
 1.23 Intr -   3145   3030  116  0  2  107  119    74 0.996  11.57
 1.22 Intr -   4594   4498   97  2  1   86   68    44 0.981   0.35
 1.21 Intr -   4877   4673  205  2  1  122   82   149 0.953  15.55
 1.20 Intr -  13184  13009  176  0  2  113   86   121 0.984  13.14
 1.19 Intr -  14099  13997  103  2  1   74  100    40 0.980   2.63
 1.18 Intr -  16562  16331  232  1  1   28  103   184 0.350  10.75
 1.17 Intr -  17340  17271   70  1  1   96   80    49 0.331   2.22
 1.16 Intr -  25875  25585  291  1  0  108   25   309 0.559  22.78
 1.15 Intr -  26285  26007  279  0  0   78   92   194 0.995  15.33
 1.14 Intr -  28511  28383  129  0  0  104  116    86 0.994  12.75
 1.13 Intr -  34511  34375  137  1  2   95   89     0 0.951   0.09
 1.12 Intr -  36461  36187  275  2  2   75   99   250 0.962  20.21
 1.11 Intr -  41085  40893  193  2  1   83   93   110 0.174   9.57
 1.10 Intr -  58657  58468  190  2  1   81   65   135 0.381   8.22
 1.09 Intr -  60213  60137   77  2  2   53   69    36 0.681  -3.56
 1.08 Intr -  60631  60513  119  1  2  110   81    38 0.869   3.64
 1.07 Intr -  63650  63459  192  2  0   58  115   166 0.962  15.07
 1.06 Intr -  73963  73875   89  2  2  117   68    85 0.926   8.17
 1.05 Intr -  76713  76617   97  0  1   83  106    18 0.151   1.76
 1.04 Intr -  79650  79445  206  1  2   78   98   282 0.998  26.20
 1.03 Intr -  81827  81684  144  0  0   47   87   125 0.586   7.63
 1.02 Intr -  82076  82038   39  0  0   94   80    43 0.564   1.38
 1.01 Init -  84002  83909   94  2  1   61   89    77 0.691   5.69
 1.00 Prom -  85675  85636   40                              -4.55

 2.06 PlyA -  88133  88128    6                               1.05
 2.05 Term -  89909  89826   84  2  0  126   42     6 0.337  -3.53
 2.04 Intr -  91715  91548  168  2  0   58   75   164 0.693  11.32
 2.03 Intr - 104559 104519   41  1  2  132  106   -15 0.014   1.72
 2.02 Intr - 115920 115755  166  0  1   46   95   293 0.990  24.41
 2.01 Init - 116212 116156   57  1  0   99   73    78 0.790   6.80
 2.00 Prom - 120248 120209   40                              -7.55

 3.00 Prom + 121550 121589   40                              -7.45
 3.01 Init + 124078 124143   66  0  0  101   72    73 0.723   6.12
 3.02 Intr + 146651 146743   93  1  0  110   98     0 0.768   2.44
 3.03 Intr + 154852 155037  186  0  0  117   64   113 0.976  10.76
 3.04 Intr + 167517 167630  114  2  0  101   58    48 0.832   2.82
 3.05 Intr + 171226 171361  136  0  1   65  110   155 0.999  14.62
 3.06 Intr + 173248 173462  215  2  2  124   92   158 0.999  17.31
 3.07 Intr + 182504 182597   94  1  1   50   48   155 0.786   6.32
 3.08 Intr + 183892 184011  120  2  0   59   76    59 0.561   1.35
 3.09 Intr + 184555 184815  261  2  0   32   81   171 0.803   7.34
 3.10 Term + 195803 195981  179  0  2   69   35   154 0.725   5.07
 3.11 PlyA + 196671 196676    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  79062  78901  162  0  0   70   42   125 0.834   3.05
S.002 Term - 115567 115431  137  2  2   51   47   130 0.843   2.40
S.003 Init + 116934 117030   97  2  1   71   80   114 0.878   9.48


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:167819979_168035841|GENSCAN_predicted_peptide_1|1271_aa
MTEKFSSAMYMDRGAEQLVEILNYHISAIVEKVLIFGGDILKFAGDALLALWRVERKQLK
NIITVVIKCSLEIHGLFETQEWEEGLDIRVKIGLAAGHISMLVFGDETHSHFLVIGQAVD
DVRLAQNMAQMNDVILSPNCWQLCDRSMIEIESVPDQRAVKVNFLKPPPNFNFDEFFTKC
TTFMHYYPSGEHKNLLRLACTLKPDPELEMSLQKYVMESILKQIDNKQLQGYLSELRPVT
IVFVNLMFEDQDKAEEIGPAIQDAYMHITSVLKIFQGQINKVFMFDKGCSFLCVFGFPGE
KVPDELTHALECAMDIFDFCSQVHKIQTVSIGVASGIVFCGIVGHTVRHEYTVIGQKVNL
AARMMMYYPGIVTCDSVTYNGSNLPAYFFKELPKKVMKGVADSGPLYQYWGRTEKVIIAI
SLNKISFHQTFYTIQMFMANVLGLDTCKHYKERQTNLRNKVMTLLDEKFYCLLNDIFHVQ
IVKEERIIFIIDEAQFVDSTSWRFMEKLIRTLPIFIIMSLCPFVNIPCAAARAVIKNRNT
TYIVIGAVQPNDISNKICLDLNVSCISKELDSYLGEGSCGIPFYCEELLKNLEHHEVLVF
QQTESEEKTNRTWNNLFKYSIKLTEKLNMVTLHSDKESEEVCHLTSGVRLKNLSPPTSLK
EISLIQLDSMRLSHQMLVRCAAIIGLTFTTELLFEILPCWNMKMMIKTLATLVESNIFYC
FRNGKELQKALKQNDPSFEVHYRSLSLKPSEGMDHGEEEQLRELENEVIECHRIRFCNPM
MQKTAYELWLKDQRKAMHLKCARFLEEDAHRCDHCRGRDFIPYHHFTVNIRLNALDMDAI
KKMAMSHGFKTEEKLILSNSEIPETSAFFPENRSPEEIREKILNFFDHVLTKMKTSDEDI
IPLESCQCEEILEIVILPLAHHFLALGENDKALYYFLEIASAYLIFCDNYMAYMYLNEGQ
KLLKTLKKDKSWSQTFESATFYSLKGLFQYGPDSACQENAEEGTEAPQPNLSLQLNLLVS
PYPCREKQTLSLCESAGPREPTSRIIKAYLDYSLYHHLAGYKGVWFKYEVMAMEHIFNLP
LKGEGIEIVAYVAETLVFNKLIMGHLDLAIELGSRALQMWALLQNPNRHYQSLCRLSRCL
LLNSRYPQLIQVLGRLWELSVTQEHIFSKAFFYFVCLDILLYSGRLVPFPETWLGGRRCG
ASSPVVATTMDQDPVGPVERGEAVAASGAAAAAAFGESAGQEIKGSKKLSHGPKGNVDVR
TTIAKFYLKDE

>gi568815597r:167819979_168035841|GENSCAN_predicted_CDS_1|3816_bp
atgactgagaagttcagcagtgccatgtacatggacagaggggctgagcagttggtggag
atcctcaactaccacataagtgcaatagtggagaaagtgttgatttttggaggagacatc
ctgaaatttgcaggtgatgcactgctagccctgtggagggtggagcgaaagcagctgaaa
aacattatcacagtggtaattaaatgtagcctggagatccatggattgtttgagacccag
gagtgggaagaaggcctagacatccgagtcaagataggactggctgctggccacatcagc
atgttggtctttggagatgaaacacacagccactttctggtgattggtcaggcagtggac
gatgtgcgccttgcccagaacatggctcagatgaatgatgttattctgtcaccaaactgc
tggcagctctgtgaccggagcatgattgaaattgagagtgttccagatcagagagcagtt
aaggttaacttcttaaaaccaccccccaattttaattttgatgaatttttcacaaagtgt
acgaccttcatgcattattatccttctggtgagcacaaaaacctcctgaggcttgcatgc
acgctgaagcctgatcctgaactggagatgtccctacaaaagtatgtgatggaaagcatt
ttgaagcagattgataacaaacagcttcagggctatttatctgagcttcgcccagtgacg
attgtgtttgtgaacctgatgtttgaagaccaagacaaagcagaagagataggcccagcc
atccaggatgcctatatgcacatcacttctgtcctgaagatcttccaaggccaaatcaat
aaagtcttcatgtttgacaagggctgctctttcctctgtgtctttggcttccctggggaa
aaggtacctgacgagctcactcatgctctggaatgtgctatggatatatttgacttctgc
tctcaagtccacaaaatccaaactgtatccatcggtgttgccagtgggattgtcttctgt
gggatcgttggacacactgtgagacacgagtacacagtcattggtcaaaaagtcaactta
gctgccaggatgatgatgtactacccaggaattgtgacctgcgactctgtcacctacaat
gggagcaacctaccagcgtacttttttaaagagcttccaaagaaagttatgaaaggtgtt
gcagattctggaccattgtatcagtattggggccgtactgagaaagtgattattgccatt
tcattgaataagatcagcttccatcaaactttctataccatccagatgttcatggccaat
gtcctaggcctagacacttgtaaacattataaagaacgacagaccaaccttcgaaataaa
gtcatgacactgttggatgaaaagttctactgtcttcttaatgacattttccatgttcag
atagtgaaagaggaaaggattatttttatcattgatgaggcccagtttgtggattcgacc
tcctggagatttatggagaagcttatccggactcttcctatcttcatcattatgtccctg
tgtcccttcgttaacattccctgtgcagctgccagggccgtaataaagaacaggaacacc
acctacattgtcattggtgcagtacagcctaacgacatctccaacaagatctgtcttgac
ctcaatgtgagctgcatctccaaagaactggactcgtacctgggggagggaagctgtggg
attccattttactgtgaagaattgcttaaaaacctggaacatcatgaggtactcgttttc
caacaaacggagtctgaggaaaagacaaataggacctggaataacctgttcaagtattcc
attaagctaacagagaagttaaacatggttactctccatagtgataaggaaagtgaagaa
gtctgtcacctcacaagtggtgtcagactgaaaaacctgtcacctccaacgtcattaaaa
gaaatctctctgatccagctggatagcatgagactttcccaccaaatgctggtgagatgt
gctgccatcattggcctgaccttcaccactgagttgttgtttgagattctcccctgttgg
aatatgaagatgatgatcaagaccctggcaaccctagtggaatctaacattttttattgt
ttccggaatggcaaggagcttcaaaaggccctgaaacagaatgatccctcatttgaggtg
cactatcgttccttgtctctgaagcccagtgaagggatggatcacggtgaagaggaacag
cttcgtgaactggagaatgaggtgatcgagtgccacaggattcgattctgtaaccctatg
atgcagaaaacagcctacgagctgtggctcaaggaccagagaaaagccatgcacttgaaa
tgtgcccgctttttagaagaagatgcccacagatgtgaccactgccgaggcagggacttc
attccctatcatcacttcacagtgaatattcggctcaacgctttagacatggatgccatt
aaaaagatggctatgtctcatggatttaaaactgaagaaaagcttatcttgtccaactca
gagattcctgagacatctgcattttttcctgaaaatcgcagtcctgaagaaataagagaa
aagatcttgaatttctttgaccacgttttaacaaaaatgaagacatctgacgaagacatt
atccctctggaatcttgccagtgtgaagaaatcctagagattgtcatcttgcctctggcc
caccattttctggctttgggagaaaatgacaaagccttatattacttcttagaaattgca
tctgcttatctcatcttttgtgataactacatggcatacatgtatttgaatgaaggacag
aagttgctaaaaactctcaagaaggacaaatcttggagccagacatttgagtctgccacc
ttttacagcctcaaaggtctgtttcaatatgggccagatagtgcttgccaagaaaatgct
gaggaaggcactgaagctcctcaaccgaatctttccttacaacttaatctccttgtttct
ccatatccatgtcgagaaaaacagacactttcattatgtgaatcggcaggcccaagagag
cccacctccaggatcattaaggcttacctagactattcgctataccaccacctggctggc
tacaaaggtgtgtggttcaaatatgaagtcatggccatggagcacatcttcaacctcccc
ctgaaaggcgagggcattgaaatcgtggcatacgtggctgagacactggtcttcaacaag
ctcataatgggacacctggatttggccattgagttaggctcccgagcccttcagatgtgg
gcactgctccagaatcccaaccgacattatcagtccctctgcagacttagcagatgtctc
cttctgaacagcagatacccgcaattgatccaggtgctggggcggctgtgggagctttct
gtaacacaggaacacatcttcagcaaggcatttttctattttgtctgcttggacatcctg
ctttattctggccggctagtccccttcccagagacttggctaggcggccggcgctgcggc
gccagcagccctgtggtggcgacgacgatggaccaggacccagtgggccctgtggaacga
ggagaagccgtcgcagcctcgggagctgcggccgccgcggcattcggggaatctgcgggg
caggaaattaagggatccaaaaagctgagtcatggtccaaaaggaaacgttgatgtcagg
acaaccatagccaaattttatctcaaggatgagtaa

>gi568815597r:167819979_168035841|GENSCAN_predicted_peptide_2|171_aa
MAGSSACASALPAGRSADLPGTRTQPRSHPAANDPSAAMSAAGARGLRATYHRLLDKVEL
MLPEKLRPLYNHPAGPRTVFFWAPIMKWRGYTRQQFCHESTLNKGDGVIYNLTRSPYCPL
AGTGPHILYLSRSASNLELLKEAKLLLPLSLQRQETVREMACLLTTTYLAR

>gi568815597r:167819979_168035841|GENSCAN_predicted_CDS_2|516_bp
atggcgggcagctcggcctgcgcaagcgcgctgccagcagggcgcagcgcagacttgcca
gggacgagaacacagccacgctcccacccggctgccaacgatccctcggcggcgatgtcg
gccgccggtgcccgaggcctgcgggccacctaccaccggctcctcgataaagtggagctg
atgctgcccgagaaattgaggccgttgtacaaccatccagcaggtcccagaacagttttc
ttctgggctccaattatgaaatggagagggtatactcgccagcagttttgccacgagagt
acactgaacaaaggagacggggtcatttataacctgacacgttcaccctactgcccattg
gccggaacaggacctcacattctgtatttgtcccgatcggctagcaacttagaactttta
aaagaggcaaagcttttacttcctctttctcttcagagacaagagacagtaagagaaatg
gcctgtctcctcaccaccacttacctagcaagatga

>gi568815597r:167819979_168035841|GENSCAN_predicted_peptide_3|487_aa
MASIPRPCDLPASASQSAGITGVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRS
GHRANIFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVP
NDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINCRRAATSVAICPPIPYYLAVGC
SDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNKSCRVTSLCYSEDGQEILVS
YSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRGDWSDTGPRARPESERER
DGEQSPNVSLMQRMSDMLSRWFEEASEVAQSNRGRGRSRPRGGTSQSDISTLPTVPSSPD
LEVSETAMEVDTPAEQFLQPSTSSTMSAQAHSTSSPTESPHSTPLLSSPDSEQRQSVEAS
GHHTHHQSEFLRGPEIALLRKRLQQLRLKKAEQQRQQELAAHTQQQPSTSDQSSHEGSSQ
DPHASGY

>gi568815597r:167819979_168035841|GENSCAN_predicted_CDS_3|1464_bp
atggcctcgatcccccgaccttgtgatctgcccgcctcggcctcccaaagtgctgggatc
acaggggttaatacaatctgttggaatgacactggagaatatattttatctggctcagat
gacaccaaattagtaattagtaatccttacagcagaaaggttttgacaacaattcgttca
gggcaccgagcaaacatatttagtgcaaagttcttaccttgtacaaatgataaacagatt
gtatcctgctctggagatggagtaatattttataccaacgttgagcaagatgcagaaacc
aacagacaatgccaatttacgtgtcattatggaactacttatgagattatgactgtaccc
aatgacccttacacttttctctcttgtggtgaagatggaactgttaggtggtttgataca
cgcatcaaaactagctgcacaaaagaagattgtaaagatgatattttaattaactgtcga
cgtgctgccacgtctgttgctatttgcccaccaataccatattaccttgctgttggttgt
tctgacagctcagtacgaatatatgatcggcgaatgctgggcacaagagctacagggaat
tatgcaggtcgagggactactggaatggttgcccgttttattccttcccatcttaataat
aagtcctgcagagtgacatctctgtgttacagtgaagatggtcaagagattctcgttagt
tactcttcagattacatatatctttttgacccgaaagatgatacagcacgagaacttaaa
actccttctgcggaagagagaagagaagagttgcgacaaccaccagttaagcgtttgaga
cttcgtggtgattggtcagatactggacccagagcaaggccggagagtgaacgagaacga
gatggagagcagagtcccaatgtgtcattgatgcagagaatgtctgatatgttatcaaga
tggtttgaagaagcaagtgaggttgcacaaagcaatagaggacgaggaagatctcgaccc
agaggtggaacaagtcaatcagatatttcaactcttcctacggtcccatcaagtcctgat
ttggaagtgagtgaaactgcaatggaagtagatactccagctgaacaatttcttcagcct
tctacatcctctacaatgtcagctcaggctcattcgacatcatctcccacagaaagccct
cattctactcctttgctatcttctccagacagtgaacaaaggcagtctgttgaggcatct
ggacaccacacacatcatcagtctgaatttttaaggggccctgagatagctttgcttcgt
aagcgcctgcaacaactgaggcttaagaaggctgagcagcagaggcagcaagagctagct
gcacatacccagcaacagccttccacttctgatcagtcttctcatgagggctcttcacag
gaccctcatgcttcaggttattaa