GENSCAN 1.0	Date run:  6-Nov-116	Time: 07:07:01

Sequence gi568815583r:83157445_83368234 : 210790 bp : 40.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -    129     54   76  0  1   85   54    87 0.434   3.17
 1.03 Intr -    597    459  139  2  1   77   95   119 0.401  11.05
 1.02 Intr -   6631   6555   77  1  2   69  111    34 0.136   1.19
 1.01 Init -   9286   9281    6  1  0   84   87     0 0.086   0.44
 1.00 Prom -  19781  19742   40                              -5.05

 2.00 Prom +  26014  26053   40                              -3.85
 2.01 Init +  49189  49235   47  0  2   73   80    53 0.429   3.21
 2.02 Intr +  49442  49665  224  2  2   54   11   209 0.448   6.65
 2.03 Intr +  50812  50963  152  2  2   90   46   156 0.941  10.56
 2.04 Term +  51901  51957   57  0  0  111   34   128 0.989   6.41
 2.05 PlyA +  54319  54324    6                               1.05

 3.00 Prom +  58942  58981   40                              -6.15
 3.01 Sngl +  64868  65290  423  1  0   60   46   346 0.969  23.64
 3.02 PlyA +  65989  65994    6                               1.05

 4.04 PlyA -  68458  68453    6                               1.05
 4.03 Term -  86339  86191  149  0  2  105   48    83 0.702   3.08
 4.02 Intr -  86520  86424   97  0  1   45   80    57 0.571  -0.74
 4.01 Init -  94496  94446   51  2  0   91   93    83 0.901   8.32
 4.00 Prom -  97422  97383   40                              -3.45

 5.07 PlyA -  98479  98474    6                               1.05
 5.06 Term - 100682  99998  685  1  1   82   42   459 0.963  32.81
 5.05 Intr - 107371 105507 1865  1  2   46  110  1261 0.988 110.47
 5.04 Intr - 109627 109392  236  2  2   74   92   214 0.045  16.88
 5.03 Intr - 118970 118775  196  2  1   89   12   106 0.017   1.17
 5.02 Intr - 126976 126764  213  1  0  -23   47   193 0.042   2.09
 5.01 Init - 127184 127086   99  2  0   42   99   250 0.757  19.81
 5.00 Prom - 129373 129334   40                              -8.45

 6.06 PlyA - 129691 129686    6                               1.05
 6.05 Term - 131513 131301  213  2  0   77   38   111 0.321   1.25
 6.04 Intr - 133388 133365   24  2  0   67  115    24 0.296   0.30
 6.03 Intr - 135664 135517  148  0  1   47   37   155 0.098   5.62
 6.02 Intr - 142288 142216   73  2  1   38   84    90 0.023   1.15
 6.01 Init - 170213 169991  223  2  1   85  119    39 0.450   5.46
 6.00 Prom - 171774 171735   40                              -3.65

 7.05 PlyA - 172835 172830    6                               1.05
 7.04 Term - 179288 179119  170  0  2   66   49   101 0.392   1.06
 7.03 Intr - 199443 199362   82  0  1   79   82    71 0.008   3.89
 7.02 Intr - 202134 201948  187  2  1   77    6   155 0.028   4.97
 7.01 Init - 205178 205165   14  2  2   62   99    36 0.343   0.48
 7.00 Prom - 208907 208868   40                              -4.15

 8.02 PlyA - 208993 208988    6                               1.05
 8.01 Term - 209678 209634   45  2  0  117   45    97 0.629   4.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  74981  75029   49  1  1   77   89    38 0.926   1.96
S.002 Term +  77911  78017  107  2  2   92   43    88 0.907   2.29
S.003 Init - 109601 109392  210  2  0   53   92   235 0.862  19.23
S.004 Term + 126202 126649  448  1  1   77   51   295 0.813  18.40
S.005 Term - 199408 199212  197  2  2    8   38   178 0.803   1.39
S.006 Intr - 202134 201986  149  2  2   77   84   133 0.834  10.76


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:83157445_83368234|GENSCAN_predicted_peptide_1|100_aa
MIIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKEYKDKFGKSNKRKGFNEGLW
EIENNPGVKFTGYQAIQQQSSSETEGEGGNTADASSEEEX

>gi568815583r:83157445_83368234|GENSCAN_predicted_CDS_1|300_bp
atgattattgatgaactcccagagggcgctgtgaagcctccagcaaacaagtatcctatc
ttcttttttggcacccatgaaactgcatttctaggtcccaaagacctttttccatataag
gagtacaaagacaagtttggaaagtcaaacaaacggaaaggatttaacgaaggattgtgg
gaaatagaaaataacccaggagtaaagtttactggctaccaggcaattcagcaacagagc
tcttcagaaactgagggagaaggtggaaatactgcagatgcaagcagtgaggaagaagnn

>gi568815583r:83157445_83368234|GENSCAN_predicted_peptide_2|159_aa
MEVERHKKLAGPTSQRIYCPPALAGSRTAAHPAAVPAPTFARDPGYPPMTLPGAEASVAG
PLPGGVASRSAPAFQEEGSVGPAGAGPAFETSHFRGCSLVSGGQRRSRPGGRRREGTLCW
APSCRKEHRSGVSDLIGFLPQNLPYAAAMMSRIAHEAVE

>gi568815583r:83157445_83368234|GENSCAN_predicted_CDS_2|480_bp
atggaggtggaaaggcacaagaagcttgctggacccaccagtcagaggatttactgcccg
ccggcactcgccggctcgcggacagccgctcaccccgctgccgtacctgccccgacgttc
gcccgggacccagggtatccaccaatgaccctgcccggagccgaagcctccgtcgcaggc
ccgctgcccggcggcgtggcttcccggtcggcaccggctttccaggaggaaggcagcgtc
gggcctgcgggggccggacccgccttcgaaaccagccacttccgcggctgctctctggtg
agtgggggacaaaggcgctccaggcctgggggacggcggcgcgaggggaccctctgctgg
gcaccaagctgccggaaagagcaccgctccggagtcagcgaccttattggattcttgccc
cagaacctaccgtatgcagctgccatgatgtcacgcattgctcatgaagctgtagaatga

>gi568815583r:83157445_83368234|GENSCAN_predicted_peptide_3|140_aa
MKLPEERSGSNICCSAVFAVLQPLLVTPRKTGSGVDLQQTPADLQLRVLSVRRKTNRKDI
HTKTPSVRHHHQRPKVDKTTKMGRNQNRKGDNSKNQSASSPPKECSCLPVTEQSWTENDF
EKLREEGFRQSNFSELKEDV

>gi568815583r:83157445_83368234|GENSCAN_predicted_CDS_3|423_bp
atgaagcttccagaggaacgatcaggcagcaacatttgctgttccgcagtattcgctgtt
ctgcagcctctgctggtgacacccaggaaaacagggtctggagtggacctccagcaaact
ccagcagacctgcagctgagggtcctgtctgttagaaggaaaactaacagaaaggacatc
cacaccaaaaccccatctgtacgtcaccatcatcaaagaccaaaggtagataaaaccaca
aagatggggagaaaccagaatagaaaaggtgacaattctaaaaatcagagtgcctcttct
cctccaaaggaatgcagctgcttgccagtaacagaacaaagctggacagagaatgacttt
gagaagttgagagaagaaggcttcagacaatcaaacttctccgagctaaaggaggatgtt
tga

>gi568815583r:83157445_83368234|GENSCAN_predicted_peptide_4|98_aa
MPGLSRLTPALAPQSPLNQSRCPFLLHFPLSLFLSWVNGPKRGGLLEFLARTPLGSSKAS
QVRTLLAADRDSLRSGCAVGCTLNSFPKDREKNLSHNA

>gi568815583r:83157445_83368234|GENSCAN_predicted_CDS_4|297_bp
atgcctggcctcagcaggctgaccccagcccttgctccacagtctccgctgaaccagtcc
cgctgtcctttcctccttcactttccactctccctcttcctgagctgggtcaatggacca
aaacgtggaggcttgcttgagtttctggctcggaccccactcggttcttccaaagctagt
caagtgaggactctgctggccgctgacagggacagcctgaggtcaggatgtgcagtaggg
tgtaccctgaatagcttcccgaaggacagggagaaaaacctatcgcacaatgcttga

>gi568815583r:83157445_83368234|GENSCAN_predicted_peptide_5|1097_aa
MRRRPPSRGGRGAARARETRRQPRHRSGRRMAEGQLATCAAARPRGAAGGTVVSGREAAA
GGLGLWDPSLPDVPELANGLRAGSAGASEVPAGQPVEIGGGTRRIIPVEGLPSIRPSAKC
WFGVLVVSLPLAGMIHCEATFLGAFTLDIFGSSVQSRTTRAQKTEELTCSLSKLRIPPMY
PTSQVEIVQSNVVFDISSLMLYGTQAIPVRLKILLDRLFSVLKQDEVLQILHALDWTLQD
YIRGYVLQDASGKVLDHWSIMTSEEEVATLQQFLRFGETKSIVELMAIQEKEEQSIIIPP
STANVDIRAFIESCSHRSSSLPTPVDKGNPSSIHPFENLISNMTFMLPFQFFNPLPPALI
GSLPEQYMLEQGHDQSQDPKQEVHGPFPDSSFLTSSSTPFQVEKDQCLNCPDAITKKEDS
THLSDSSSYNIVTKFERTQLSPEAKVKPERNSLGTKKGRVFCTACEKTFYDKGTLKIHYN
AVHLKIKHKCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMNRNNRDKDLRNSLNLASSEN
YKCPGFTVTSPDCRPPPSYPGSGEDSKGQPAFPNIGQNGVLFPNLKTVQPVLPFYRSPAT
PAEVANTPGILPSLPLLSSSIPEQLISNEMPFDALPKKKSRKSSMPIKIEKEAVEIANEK
RHNLSSDEDMPLQVVSEDEQEACSPQSHRVSEEQHVQSGGLGKPFPEGERPCHRESVIES
SGAISQTPEQATHNSERETEQTPALIMVPREVEDGGHEHYFTPGMEPQVPFSDYMELQQR
LLAGGLFSALSNRGMAFPCLEDSKELEHVGQHALARQIEENRFQCDICKKTFKNACSVKI
HHKNMHVKEMHTCTVEGCNATFPSRRSRDRHSSNLNLHQKALSQEALESSEDHFRAAYLL
KDVAKEAYQDVAFTQQASQTSVIFKGTSRMGSLVYPITQVHSASLESYNSGPLSEGTILD
LSTTSSMKSESSSHSSWDSDGVSEEGTVLMEDSDGNCEGSSLVPGEDEYPICVLMEKADQ
SLASLPSGLPITCHLCQKTYSNKGTFRAHYKTVHLRQLHKCKVPGCNTMFSSVRSRNRHS
QNPNLHKSLASSPSHLQ

>gi568815583r:83157445_83368234|GENSCAN_predicted_CDS_5|3294_bp
atgcggcggcgcccgccgagccggggcggacgcggggcggcccgggcccgggagacgcgc
cggcagccccggcaccgcagcggtcgcaggatggccgagggccagctggctacctgcgcg
gcagcgcggccccgaggcgcggcgggagggaccgtggtctccggccgggaggcggcggcg
ggggggttggggctctgggacccgtccctgcccgacgtcccggagctggcaaacggtctc
cgcgccggatctgcgggcgcgtcggaggtgccggcgggccagcctgtggaaatcggcggc
ggcactcggcggataataccagtggagggcttaccaagtatcaggcccagtgctaagtgt
tggtttggagttttagttgtttcattgcctcttgcaggaatgattcattgtgaagcaact
tttttaggggcttttaccttagatatttttggtagctctgtgcagagtcggacaaccaga
gcccagaagaccgaagaacttacttgttctctaagtaagctaaggatcccccccatgtat
ccaacaagccaggtggagattgtccagtccaatgtagtgtttgatattagcagcctcatg
ctctatgggacccaggccatccccgttcgcctaaaaatcctactggaccggctcttcagt
gtgttgaagcaagatgaggttctccagatcctccatgccttggactggacacttcaggat
tatatccgtggatacgtactgcaggatgcatcaggaaaggtgttggatcactggagcatc
atgaccagtgaggaagaagtggccaccttgcagcagttccttcgttttggagagaccaaa
tctatagttgaactcatggcaattcaagagaaagaagagcaatccatcatcataccacct
tccacagcaaatgtagatatcagggctttcatcgagagctgcagtcacaggagttctagc
ctccccactcctgtggacaaaggaaaccccagcagtatacacccctttgagaacctcata
agcaacatgactttcatgctgcctttccagttcttcaaccctctgcctcctgcactgata
gggtcattgcccgaacaatatatgttggagcagggtcatgaccaaagtcaggaccccaaa
caggaagtccatgggcccttccctgacagcagcttcttaacttccagttccacaccattt
caggttgaaaaagatcagtgtttaaactgtccggatgctattactaaaaaagaagacagc
acccatttaagtgactccagctcatacaacattgtcactaagtttgaaaggacacagtta
tcccctgaggccaaagtgaagcctgagaggaatagccttggtacaaagaagggccgggtg
ttctgcactgcatgtgagaagaccttctatgacaaaggcaccctcaaaatccactacaat
gccgtccacttgaagatcaagcataagtgcaccatcgaagggtgtaacatggtgttcagc
tccctaaggagccggaatcgccatagcgccaaccccaaccctcggctgcacatgccaatg
aacagaaataaccgggacaaagacctcaggaacagcctgaacctggccagctctgagaac
tacaagtgcccaggtttcacagtgacgtccccagactgtaggcctcctcccagctaccct
ggttcaggagaggattccaaaggccaaccagccttcccaaacattgggcaaaatggtgtg
ctttttcccaacctaaagacagtccagccagtccttcctttctaccgcagtccagccacg
cctgccgaggtagcaaacacgcctgggatactcccttccctcccgctgttgtcctcttca
atcccagaacagctcatttcaaacgaaatgccatttgatgcccttcccaagaagaaatcc
aggaagtccagtatgcctatcaaaatagagaaagaagctgtggaaatagctaatgagaaa
agacacaacctcagctcagatgaagacatgcccctacaggtggtcagtgaagatgagcag
gaggcctgcagtcctcagtcacacagagtatctgaggagcagcatgtacagtcaggaggc
ttagggaagcctttccctgaaggggagaggccctgccatcgtgaatcagtaattgagtcc
agtggagccatcagccaaacccctgagcaggccacacacaattcagagagggagactgag
cagacaccagcattgatcatggtgccaagggaggtcgaggatggtggccatgaacactac
ttcacacctgggatggaaccccaagttcctttttctgactacatggaactgcagcagcgc
ctgctggctgggggactcttcagtgctttgtccaacaggggaatggcttttccttgtctt
gaagattctaaagaactggagcacgtgggtcagcatgcattagcaaggcagatagaagaa
aatcgcttccagtgtgacatctgcaagaagacctttaaaaatgcttgtagtgtgaaaatt
catcacaagaatatgcatgtcaaagaaatgcacacatgcacagtggagggctgtaatgct
acctttccctcccgcaggagcagagacagacacagctcaaacctaaacctccaccaaaaa
gcattgagccaggaagcattggagagtagtgaagatcatttccgtgcagcttaccttctg
aaagatgtggctaaggaagcctatcaggatgtggcttttacacagcaagcctcccagaca
tctgtcatcttcaaaggaacaagtcgaatgggcagtctggtttacccaataacgcaagtc
cacagtgccagcctggagagctacaactctggccccttgagcgagggcaccatcctggat
ttgagcactacctcgagcatgaagtcagagagtagcagccattcttcctgggactctgac
ggggtgagtgaggaaggcactgtgcttatggaggacagtgatgggaactgtgaagggtcg
agccttgtccctggggaagatgagtaccccatctgtgtcctgatggagaaggctgaccag
agccttgctagcctgccttctgggttgcccataacctgtcatctctgccaaaagacatac
agtaacaaagggacctttagggcccactacaaaactgtgcacctccggcagctccacaaa
tgcaaagtaccaggctgcaacaccatgttttcgtctgttcgcagtcgaaacagacacagc
cagaatcccaacctgcacaaaagcctggcctcatctccaagtcacctccagtaa

>gi568815583r:83157445_83368234|GENSCAN_predicted_peptide_6|226_aa
MGLSAWLHIGDFKYSHGHMIQRGWLSSWPMIQFLPYSHLPLGHCCSLASLPGIEEKKERR
ANICLSIWLPISNSDPCNKKLIPLANSQPEPDAFLPTAIKMETSPPKAIVSYGIQLKEEG
GDMLLFPTGPKFQSFKCVVNPTKDKDLQNNLPVKLKALCEKLRNRNNLLPPKPWATFGMA
SCPLPQKGAALELKRGNCDTCARFVVGQPVPQQTAAWGGQFGPSAA

>gi568815583r:83157445_83368234|GENSCAN_predicted_CDS_6|681_bp
atgggattatcggcctggctccacattggtgacttcaagtacagccatggccacatgatt
cagaggggatggctatccagttggcccatgatccagtttcttccttactctcacctgcca
cttggccactgttgttcattagcatctctcccaggaatagaggagaaaaaggaaaggaga
gccaatatttgcttgtccatctggctccccatcagcaactctgacccatgtaacaagaag
ctgatacctctggcaaacagccagccagaacctgatgccttcctgccaacagccataaaa
atggaaacatctcccccaaaggctattgtcagttatggaattcaacttaaggaggaaggt
ggtgacatgctcctctttcccactggaccaaaatttcaaagcttcaaatgtgtggtaaat
ccaaccaaagataaagatttgcagaataatcttccagtaaaactgaaggccttgtgtgag
aaattgaggaacaggaacaatcttttgccaccaaaaccctgggccacatttgggatggcc
tcatgtcctctccctcaaaagggagcagccctggagctgaagaggggaaattgtgacacc
tgtgccaggtttgtggtaggccagcctgtcccccagcagacagctgcgtgggggggccag
tttggcccaagtgctgcttag

>gi568815583r:83157445_83368234|GENSCAN_predicted_peptide_7|150_aa
MVLRSCEGARNVKFFAKRFKYWRLTNIPFLATPSGKEDAVMSKTVLGKRAQEMKCKSLLL
GDAGSKQALPFIEDMIALRESQPEKRTVEEGRGEEPGKYLLNESMNEWKNTDNHFQRRGN
DVFSFGRGRLKESVGYLSGEISMRPLYLQV

>gi568815583r:83157445_83368234|GENSCAN_predicted_CDS_7|453_bp
atggtgctgcggagttgtgagggagcaagaaatgtaaaattttttgcaaaacgtttcaaa
tactggagactcactaacatcccatttctggcaacacctagcggaaaggaggacgcagta
atgagcaaaaccgtcctggggaaaagagcacaggagatgaagtgtaagtcgttactcctc
ggtgatgcagggtccaagcaagccttgcctttcatagaagacatgattgctttaagagag
tcccaaccagagaagaggacggtggaggagggaagaggggaagagcctgggaaatattta
ttaaatgaatcaatgaacgaatggaagaatacggacaatcattttcaaaggagaggaaat
gatgtgttcagttttggacgtggtaggcttaaggaatctgtgggatatctgagtggagaa
atatccatgagaccgttgtatctgcaggtctga

>gi568815583r:83157445_83368234|GENSCAN_predicted_peptide_8|14_aa
PTQREDDEDEGLPF

>gi568815583r:83157445_83368234|GENSCAN_predicted_CDS_8|45_bp
cctactcagcgtgaagatgacgaggatgaaggcttgcctttttga