GENSCAN 1.0	Date run:  7-Nov-116	Time: 04:14:32

Sequence gi568815583r:39991790_40206086 : 214297 bp : 44.59% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    386    440   55  1  1   57   97    40 0.512   0.35
 1.02 Intr +    980   1059   80  0  2  103  110    26 0.782   5.57
 1.03 Intr +   2927   2980   54  1  0   46   72    68 0.463   0.18
 1.04 Intr +   5175   5276  102  2  0  103   42    61 0.907   3.37
 1.05 Intr +   6942   6995   54  2  0   49   91    72 0.839   2.78
 1.06 Intr +   9199   9435  237  0  0   37   86   428 0.985  35.31
 1.07 Intr +  10924  10999   76  0  1   96   80   101 0.900   9.19
 1.08 Intr +  11404  11525  122  2  2   69   76   100 0.900   7.11
 1.09 Intr +  15227  15276   50  1  2  120  107   -30 0.931  -0.42
 1.10 Intr +  16238  16406  169  2  1   83   21   119 0.826   4.65
 1.11 Intr +  24713  24883  171  1  0  119   36   152 0.994  13.24
 1.12 Intr +  25319  25453  135  1  0   94   81   159 0.999  16.56
 1.13 Intr +  27304  27411  108  0  0  129   84   102 0.997  14.38
 1.14 Intr +  29110  29238  129  0  0  105   95   117 0.833  14.99
 1.15 Intr +  30730  30816   87  0  0   80   98   100 0.999  10.37
 1.16 Intr +  34188  34300  113  2  2   60   93   117 0.993   8.58
 1.17 Intr +  37617  37675   59  0  2   94   75    -4 0.952  -2.57
 1.18 Intr +  38570  38667   98  0  2   84   86    98 0.984   8.93
 1.19 Intr +  40380  40448   69  2  0   86   87    41 0.893   3.18
 1.20 Intr +  42537  42655  119  2  2   79  106    96 0.958   9.76
 1.21 Term +  43238  43295   58  2  1  129   40     4 0.878  -3.14
 1.22 PlyA +  43785  43790    6                               1.05

 2.06 PlyA -  43969  43964    6                               1.05
 2.05 Term -  44711  44544  168  2  0   99   43   160 0.999  10.48
 2.04 Intr -  45160  45131   30  1  0   95   86    21 0.580   0.93
 2.03 Intr -  45229  45197   33  1  0  147  101    24 0.882   8.02
 2.02 Intr -  46605  46493  113  1  2   85   77   124 0.980  11.10
 2.01 Init -  47327  47087  241  2  1  104   58   164 0.649  11.16
 2.00 Prom -  48323  48284   40                              -8.36

 3.00 Prom +  58041  58080   40                              -3.56
 3.01 Init +  69169  69264   96  0  0   67   11   116 0.043   2.11
 3.02 Intr +  73641  73800  160  2  1   68   72    36 0.092  -0.44
 3.03 Intr +  82103  82225  123  0  0   27  101    68 0.479   2.56
 3.04 Intr +  82899  83174  276  1  0   56   68   152 0.133   7.49
 3.05 Intr +  90543  90685  143  1  2  119   85    16 0.163   4.47
 3.06 Term +  95910  96026  117  2  0  101   54    95 0.694   5.94
 3.07 PlyA +  96087  96092    6                               1.05

 4.09 PlyA -  96121  96116    6                               1.05
 4.08 Term -  96404  96317   88  1  1  116   54    62 0.572   2.73
 4.07 Intr - 100099 100002   98  1  2  103   66    62 0.797   4.31
 4.06 Intr - 101117 100944  174  2  0   63   93    83 0.946   6.44
 4.05 Intr - 101417 101370   48  2  0   87   77    25 0.488   0.18
 4.04 Intr - 112551 112391  161  1  2   84   32   109 0.195   4.61
 4.03 Intr - 114302 114006  297  0  0   88  101   171 0.955  15.25
 4.02 Intr - 117330 116984  347  2  2   48  105   132 0.634   5.94
 4.01 Init - 147771 146624 1148  0  2   58   80   227 0.188  12.30
 4.00 Prom - 150592 150553   40                              -4.66

 5.00 Prom + 150746 150785   40                              -4.26
 5.01 Init + 164891 165017  127  1  1  102   66    87 0.976   8.28
 5.02 Intr + 169340 169466  127  0  1   49   92    94 0.902   5.64
 5.03 Intr + 173264 173407  144  2  0   81   78    88 0.976   6.50
 5.04 Intr + 178273 178332   60  1  0   93   80    84 0.982   5.95
 5.05 Intr + 178748 178892  145  2  1  106   83    73 0.993   8.88
 5.06 Intr + 184688 184884  197  1  2   66   54    55 0.973  -1.89
 5.07 Intr + 191925 192094  170  0  2   74  110   165 0.992  16.89
 5.08 Intr + 193376 193590  215  0  2   49   86    61 0.764   0.43
 5.09 Intr + 193762 193853   92  0  2   92   73    22 0.700  -0.11
 5.10 Intr + 204756 204985  230  0  2   80   93   131 0.842  10.31
 5.11 Intr + 207826 207938  113  2  2   63   91    87 0.786   6.60

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:39991790_40206086|GENSCAN_predicted_peptide_1|714_aa
ADSKQDDQTGDLIKSDPSGHLTGMVGTALYVSPEVQGSTKSAYNQGALDNNIKLKQTSKY
LVRKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPEDFDDGEHAKQKSVIS
WLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLTNVDGKAYRTMMAQIFSQRI
SPAIDYTYDSDILKGNFSIRTAKMQQHVCETIIRIFKRHGAVQLCTPLLLPRNRQIYEHN
EAALFMDHSGMLVMLPFDLRIPFARYVARNNILNLKRYCIERVFRPRKLDRFHPKELLEC
AFDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQLCRLYKFIEQKGDLQDLMPTINSLIKQ
KTGIAQLVKYGLKDLEEVVGLLKKLGIKLQVLINLGLVYKVQQHNGIIFQFVAFIKRRQR
AVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAVLNMEESVTISSCDLL
VVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRHHEITYVALVSDKEGS
HVKVKSFEKERQTEKRVLETELVDHVLQKLRTKVTDERNGREASDNLAVQNLKGSFSNAS
GLFEIHGATVVPIVSVLAPEKLSASTRRRYETQVQTRLQTSLANLHQKSSEIEILAWDAD
EQAFNTTVKQLLSRLPKQRYLKLVCDEIYNIKVEKKVSVLFLYSYRDDYYRILF

>gi568815583r:39991790_40206086|GENSCAN_predicted_CDS_1|2145_bp
gctgacagcaaacaagacgatcagacaggagacttgattaagtcagacccttcaggtcac
ttaactgggatggttggcactgctctctatgtaagcccagaggtccaaggaagcaccaaa
tctgcatacaaccagggagcattggacaacaacataaagttgaaacagacatctaagtac
ctggtgaggaaagtggatctcttcagcctgggaattatcttctttgagatgtcctatcac
cccatggtcacggcttcagaaaggatctttgttctcaaccaactcagagatcccacttcg
cctaagtttccagaagactttgacgatggagagcatgcaaagcagaaatcagtcatctcc
tggctgttgaaccacgatccagcaaaacggcccacagccacagaactgctcaagagtgag
ctgctgcccccaccccagatggaggagtcagagctgcatgaagtgctgcaccacacgctg
accaacgtggatgggaaggcctaccgcaccatgatggcccagatcttctcgcagcgcatc
tcccctgccatcgattacacctatgacagcgacatactgaagggcaacttctcaatccgt
acagccaagatgcagcagcatgtgtgtgaaaccatcatccgcatctttaaaagacatgga
gctgttcagttgtgtactccactactgcttccccgaaacagacaaatatatgagcacaac
gaagctgccctattcatggaccacagcgggatgctggtgatgcttccttttgacctgcgg
atcccttttgcaagatatgtggcaagaaataatatattgaatttaaaacgatactgcata
gaacgtgtgttcaggccgcgcaagttagatcgatttcatcccaaagaacttctggagtgt
gcatttgatattgtcacttctaccaccaacagctttctgcccactgctgaaattatctac
actatctatgaaatcatccaagagtttccagcacttcagctgtgtcgactctacaagttt
attgaacagaagggagatttgcaagatcttatgccaacaataaattcattaataaaacag
aaaacaggtattgcacagttggtgaagtatggcttaaaagacctagaggaggttgttgga
ctgttgaagaaactcggcatcaagttacaggtcttgatcaatttgggcttggtttacaag
gtgcagcagcacaatggaatcatcttccagtttgtggctttcatcaaacgaaggcaaagg
gctgtacctgaaatcctcgcagctggaggcagatatgacctgctgattccccagtttaga
gggccacaagctctggggccagttcccactgccattggggtcagcatagctatagacaag
atatctgctgctgtcctcaacatggaggaatctgttacaataagctcttgtgacctcctg
gttgtaagtgttggccagatgtctatgtccagggccatcaacctaacccagaaactctgg
acagcaggcatcacagcagaaatcatgtacgactggtcacagtcccaagaggaattacaa
gagtactgcagacatcatgaaatcacctatgtggcccttgtctcggataaagaaggaagc
catgtcaaggttaagtctttcgagaaggaaaggcagacagagaagcgtgtgctggagact
gaacttgtggaccatgtactgcagaaactgaggactaaagtcactgatgaaaggaatggc
agagaagcttccgataatcttgcagtgcaaaatctgaaggggtcattttctaatgcttca
ggtttgtttgaaatccatggagcaacagtggttcccattgtgagtgtgctagccccggag
aagctgtcagccagcactaggaggcgctatgaaactcaggtacaaactcgacttcagacc
tcccttgccaacttacatcagaaaagcagtgaaattgaaattctggcttgggatgctgat
gaacaggcatttaacacaactgtgaagcagctgctgtcacgcctgccaaagcaaagatac
ctcaaattagtctgtgatgaaatttataacatcaaagtagaaaaaaaggtgtctgtgcta
tttctgtacagctatagagatgactactacagaatcttattttaa

>gi568815583r:39991790_40206086|GENSCAN_predicted_peptide_2|194_aa
MVLLESEQVWLGLAGRGKGAAQALLETCASCRRTRALTRQDEDLGLANGAGPVVFQFLTE
LTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVS
SKEVNKFQMGKSQYDSEHWAYSNLLRANMDGLKKRDKKNKTKKTKAAAAAAAAAPAAAAT
APTTAATTAATAAQ

>gi568815583r:39991790_40206086|GENSCAN_predicted_CDS_2|585_bp
atggtgttgttggagagcgagcaggtatggctaggcctggccggccgagggaagggggcg
gctcaggcgttactcgagacctgtgcctcctgcaggaggaccagggccttgacgcggcag
gacgaggatttggggctggctaacggggctgggcctgttgttttccagttcctgacggag
ctgaccagacttttccagaagtgccggacgtcgggcagcgtctatatcaccttgaagaag
tatgacggtcgaaccaaacccattccaaagaagggtactgtggagggctttgagcccgca
gacaacaagtgtctgttaagagctaccgatgggaagaagaagatcagcactgtggtgagc
tccaaggaagtgaataagtttcagatgggcaagagtcagtatgatagtgaacactgggct
tattcaaacctccttagagctaacatggatgggctgaagaagagagacaaaaagaacaaa
actaagaagaccaaagcagcagcagcagcagcagcagcagcacctgccgcagcagcaaca
gcaccaacaacagcagcaacaacagcagcaacagcagcacagtaa

>gi568815583r:39991790_40206086|GENSCAN_predicted_peptide_3|304_aa
MEVKIRRSSQQGQPLQGGVRKREEEVEQKLKRWHQLPVATEHFNCGCRDYVKLYLIIINL
IVNNYMWLVVSVLGTAGAHFLLAMDTLKAARNQPCATPDLRNKSKCVRNWWVLSFTDFKN
EAADPRDSGAQLVSPSGSRNGAAGGAAYQSCAVRSHSSALGWSMGLGAVEKGAAFVGEAR
AAQEPTEGVGGSGMAGCRSRALPRGKAAKAQREIEHSTGAGRLVVGRTLPEGSCHATDSA
HPGHTLRHQSPLVSSFTKVLRNHGHLGLCCAAYRVVVGITLLNSKRGKEITAKAERLQVT
QAGS

>gi568815583r:39991790_40206086|GENSCAN_predicted_CDS_3|915_bp
atggaggtgaagattcggagaagtagccagcagggacaaccacttcaaggaggggtgcgt
aaaagggaggaggaagtggagcagaagctgaagaggtggcaccagctgcctgtggctact
gagcacttcaactgtggctgcagagactatgttaaattgtatttaatcataattaattta
attgtaaacaactacatgtggctagtggtttctgtactgggcactgcaggtgcacatttc
ctgctggccatggacacactaaaggcagccagaaatcaaccgtgcgccacccccgacctg
agaaacaagtctaaatgtgtccggaattggtgggttcttagtttcactgacttcaagaat
gaagccgcggaccctcgcgactcaggagcccagctggtttcacctagtggatcccgcaat
ggggctgcaggtggagctgcctaccagtcctgcgccgtgcgctcgcattcctcagccctt
gggtggtcgatgggactgggcgccgtggagaagggggcggcattcgtcggggaggctcgg
gccgcacaggagcctacggagggggtgggaggctcaggcatggcgggctgcaggtcccga
gccctgccccgcgggaaggcagctaaggcccagcgagaaatcgagcacagcaccggagca
gggaggctggtagttggcaggaccctgccagagggaagctgccatgccactgattcagcc
caccctggccacaccctcaggcaccagagcccactggtgtcatccttcaccaaggtgctt
cggaaccatggacatttgggcctctgctgtgctgcctatcgcgtggtggtcggaatcact
cttctcaactccaagaggggaaaggaaatcacggcgaaagctgagcgccttcaggtcact
caagctggcagctga

>gi568815583r:39991790_40206086|GENSCAN_predicted_peptide_4|786_aa
MIVYLENPIVSAPNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVRDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIY
RFNAIPIKLPMTFFTELEKATLKFIWNQKRACIAKSILSQKNKAGGITLPDFKLYYKATV
TKTAWYWYQNRHIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLFNKWCWENCLAI
CRKLKLDPFLTPYTKINSRWIKDLHVRPETIKTLEENLGNTIQDIGMGKDFMSKTPKAMA
TKAKIDKSDLIKLKSFCTAKETTIRVNRQPTGWEKIFATYSSDKGLISRLYNELKQIYKK
KQTTPPKSGRREVPFIHPSRDVEACVRDRIRTGDGAPTALLATVGILLGPLQCFHGKVRT
FVTVPGSGPARDLALHSPLVSPRRDAQGGGASSAVCGMPRAGVFWKQYRTVRSGLLPPRP
VPAAAAAPACASRLLPQPGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL
DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA
GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQGSVKGKPAT
CMVALGKVFIPLSSENPVERPPPSPPALADKERTKTASSSTPQFPPPQASPGKWYLCGQG
TSPNLHQQNQNRVWWQILLFLHNLALNGEENRNGAGPRWPVPLPALGALLAFYPIPGSTG
AIEETQ

>gi568815583r:39991790_40206086|GENSCAN_predicted_CDS_4|2361_bp
atgattgtatatctagaaaaccccatcgtctcagccccaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacttaggaatccaacttacaagggatgtgagggacctcttcaaggag
aactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttat
agattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaagct
actttaaagttcatatggaaccaaaaaagagcctgcattgccaagtcaattctaagccaa
aagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagacatatagaccaatggaacagaacagag
ccctcagaaataatgccgcatatctacaactatctgatctttgacaaacctgacaaaaac
aagcaatgggggaaggattccctatttaataaatggtgctgggaaaactgtctagccata
tgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatgg
attaaagacttacatgttagacctgaaaccataaaaaccctagaagaaaacctaggcaat
accattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggca
acaaaagccaaaattgacaaaagcgatctaattaaactaaagagcttctgcacagcaaaa
gaaactaccatcagagtgaacaggcaacctacaggatgggagaaaatttttgcaacctac
tcatctgacaaagggctaatatccagactctacaatgaactcaaacaaatttacaagaaa
aaacaaacaaccccaccaaaaagtgggcgaagggaagtaccctttattcatccgagtaga
gatgttgaagcctgtgttagggacagaatccgcactggcgacggcgctccgactgcgctt
ctggcgacggtcggaattttgctcggccccttgcaatgtttccatgggaaggttcgtaca
ttcgtgaccgtccctggcagcggcccagcccgggacttggcgcttcactcgccattggtc
agtcctcggcgtgacgcgcaggggggcggggcctcatcagctgtttgcgggatgccccga
gcaggcgtattttggaaacaataccgcaccgtgcggagtggcctcctcccgccccggcct
gtgcccgccgccgccgccgcccctgcctgcgcctcccgcctcctgccgcagcccggagag
atggagccatctcagtgtgtggaggagctggaggatgatgtgttccaaccagaggatggg
gagccggtgacccaacccgggagcttgctctctgctgacctgtttgcccagagcctactg
gactgccccctcagccgacttcagctcttccctctcacccactgctgtggccctggcctt
cgacccaccagccaggaagacaaagctacccagactctcagcccagcctcccccagccaa
ggtgtcatgctgccttgtggggtgactgaggaaccccagcgactcttttatggcaatgct
ggctatcggcttcctctccctgccagtttcccagcagtcttgcccattggggagcagccc
cccgaagggcagtggcaacatcaagcagaggtacagattgcccgaaagcttcagtgcatt
gcagaccagttccaccggcttcatgtgcagcaaggcagcgtgaaggggaagccagcaacc
tgcatggtggccctgggaaaggtttttattcccctgtccagtgagaaccctgtggagagg
cccccgcccagtcctcctgccctggcagacaaagagagaacaaagaccgcctcttccagc
accccccagtttccacccccccaggcctctcctgggaaatggtacctgtgtgggcagggc
accagccccaatctgcaccagcagaaccaaaatcgtgtgtggtggcagatcctcctcttc
ctgcacaaccttgctttgaatggagaagagaacaggaacggggcaggccctaggtggcca
gtgcccctccctgctctgggagcattgctagccttctaccccatccctggatccacaggg
gctatcgaggagacccagtga

>gi568815583r:39991790_40206086|GENSCAN_predicted_peptide_5|540_aa
MAPASAWLLVTEATRSFYFWWKMKKEQERERGVPHTFNDQISAPRAGCGRKPRRSVAQRK
GLQQDEDLSQECRMAAVKKEGGALSEAMSLEGDEWELSKENVQPLRQGRIMSTLQGALAQ
ESACNNTLQQQKRAFEYEIRFYTGNDPLDVWDRYISWTEQNYPQGGKESNMSTLLERAVE
ALQGEKRYYSDPRFLNLWLKLGRLCNEPLDMYSYLHNQGIGVSLAQFYISWAEEYEAREN
FRKADAIFQEGIQQKAEPLERLQSQHRQFQARVSRQTLLALEKEEEEEVFESSVPQRSTL
AELKSKGKKTARAPIIRVGGALKAPSQNRGLQNPFPQQMQNNSRITVFDENADEASTAEL
SKPTVQPWIAPPMPRAKENELQAGPWNTGRSLEHRPRGNTASLIAVPAVLPSFTPYVEET
ARQPVMTPCKIEPSINHILSTRKPGKEEGDPLQRVQSHQQASEEKKEKMMYCKEKIYAGV
GEFSFEEIRAEVFRKKLKEQREAELLTSAEKRAEMQKQIEEMEKKLKEIQTTQQERTGDQ

>gi568815583r:39991790_40206086|GENSCAN_predicted_CDS_5|1620_bp
atggcgccagcatctgcttggcttctggtgacggaggccacaaggagcttttacttctgg
tggaagatgaagaaggagcaagagagagaaaggggcgtaccacatacttttaacgaccag
atctcagctccgagggcaggttgcggaagaaagcccaggcggtctgtggcccagaggaaa
ggcctgcagcaggacgaggacctgagccaggaatgcaggatggcggcggtgaagaaggaa
gggggtgctctgagtgaagccatgtccctggagggagatgaatgggaactgagtaaagaa
aatgtacaacctttaaggcaagggcggatcatgtccacgcttcagggagcactggcacaa
gaatctgcctgtaacaatactcttcagcagcagaaacgggcatttgaatatgaaattcga
ttttacactggaaatgaccctctggatgtttgggataggtatatcagctggacagagcag
aactatcctcaaggtgggaaggagagtaatatgtcaacgttattagaaagagctgtagaa
gcactacaaggagaaaaacgatattatagtgatcctcgatttctcaatctctggcttaaa
ttagggcgtttatgcaatgagcctttggatatgtacagttacttgcacaaccaagggatt
ggtgtttcacttgctcagttctatatctcatgggcagaagaatatgaagctagagaaaac
tttaggaaagcagatgcgatatttcaggaagggattcaacagaaggctgaaccactagaa
agactacagtcccagcaccgacaattccaagctcgagtgtctcggcaaactctgttggca
cttgagaaagaagaagaggaggaagtttttgagtcttctgtaccacaacgaagcacacta
gctgaactaaagagcaaagggaaaaagacagcaagagctccaatcatccgtgtaggaggt
gctctcaaggctccaagccagaacagaggactccaaaatccatttcctcaacagatgcaa
aataatagtagaattactgtttttgatgaaaatgctgatgaggcttctacagcagagttg
tctaagcctacagtccagccatggatagcaccccccatgcccagggccaaagagaatgag
ctgcaagcaggcccttggaacacaggcaggtccttggaacacaggcctcgtggcaataca
gcttcactgatagctgtacccgctgtgcttcccagtttcactccatatgtggaagagact
gcacgacagccagttatgacaccatgtaaaattgaacctagtataaaccacatcctaagc
accagaaagcctggaaaggaagaaggagatcctctacaaagggttcagagccatcagcaa
gcgtctgaggagaagaaagagaagatgatgtattgtaaggagaagatttatgcaggagta
ggggaattctcctttgaagaaattcgggctgaagttttccggaagaaattaaaagagcaa
agggaagccgagctattgaccagtgcagagaagagagcagaaatgcagaaacagattgaa
gagatggagaagaagctaaaagaaatccaaactactcagcaagaaagaacaggtgatcag