GENSCAN 1.0	Date run:  3-Nov-116	Time: 05:04:47

Sequence gi568815576r:17492677_17719528 : 226852 bp : 44.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4727   4910  184  2  1   37   91   302 0.962  25.19
 1.02 Intr +   6734   6873  140  1  2   93   91   143 0.994  14.36
 1.03 Intr +  10406  10455   50  2  2  102   50    26 0.989  -1.48
 1.04 Intr +  12171  12340  170  1  2  104   91   152 0.863  16.77
 1.05 Intr +  19137  19220   84  2  0   57  105    41 0.040   2.72
 1.06 Intr +  31442  31595  154  1  1   83   95   223 0.957  22.15
 1.07 Intr +  44358  44556  199  1  1   97   76    38 0.517   1.91
 1.08 Intr +  45844  45881   38  1  2   78   96     9 0.596  -1.39
 1.09 Intr +  45964  46055   92  2  2   82   70    77 0.798   5.01
 1.10 Intr +  46317  46443  127  2  1   62   91   134 0.989  11.35
 1.11 Intr +  47736  48040  305  1  2   60   64   226 0.886  13.71
 1.12 Intr +  49163  49291  129  1  0   58  115   101 0.994  10.69
 1.13 Intr +  49481  50327  847  1  1   92   86   236 0.577  14.75
 1.14 Intr +  55472  56888 1417  0  1  107   90   541 0.933  44.67
 1.15 Intr +  59355  59466  112  0  1   84  110    87 0.977  10.88
 1.16 Intr +  77248  77310   63  0  0   86  111    17 0.082   2.71
 1.17 Intr +  87069  87111   43  2  1   80   34    64 0.119  -1.99
 1.18 Intr +  87201  87288   88  1  1   42   83    94 0.674   3.33
 1.19 Intr +  88361  88483  123  2  0  106   51   194 0.999  17.20
 1.20 Intr +  88682  88737   56  2  2   98   64    86 0.684   5.82
 1.21 Intr +  89887  89987  101  2  2  118   75   233 0.962  24.83
 1.22 Intr +  90654  90858  205  2  1   21   68   181 0.830   8.17
 1.23 Intr +  94460  94625  166  0  1  121   99   -19 0.901   1.52
 1.24 Intr +  95249  95403  155  2  2  122   91   106 0.605  14.02
 1.25 Intr +  96914  96989   76  0  1   34   94   117 0.998   5.47
 1.26 Term +  97419  97560  142  0  1  150   42    50 0.922   4.00
 1.27 PlyA +  98189  98194    6                               1.05

 2.10 PlyA -  98871  98866    6                              -0.45
 2.09 Term - 100060  99998   63  1  0  105   46    89 0.982   4.29
 2.08 Intr - 101940 101853   88  2  1  126  109    46 0.992  10.47
 2.07 Intr - 105612 105518   95  0  2   94   75   111 0.990   9.16
 2.06 Intr - 107458 107351  108  1  0   91   98    47 0.607   6.48
 2.05 Intr - 108505 108416   90  1  0   97   80    58 0.983   6.09
 2.04 Intr - 120202 120136   67  0  1   73   79   -23 0.174  -5.79
 2.03 Intr - 120644 120535  110  2  2   95  101   109 0.758  11.98
 2.02 Intr - 126850 126785   66  1  0   83  100   103 0.873  10.10
 2.01 Init - 135959 135927   33  2  0   98   94    53 0.658   6.77
 2.00 Prom - 139403 139364   40                              -5.96

 3.03 PlyA - 139526 139521    6                               1.05
 3.02 Term - 146188 145945  244  0  1   84   49   167 0.755   7.77
 3.01 Init - 166211 166165   47  2  2   86   70    27 0.067  -1.14
 3.00 Prom - 167157 167118   40                              -4.56

 4.03 PlyA - 167169 167164    6                               1.05
 4.02 Term - 172844 172428  417  2  0   60   48   244 0.862  12.88
 4.01 Init - 175538 175536    3  2  0  113   81     0 0.616   1.80
 4.00 Prom - 179006 178967   40                              -6.16

 5.00 Prom + 186051 186090   40                              -4.36
 5.01 Init + 187979 187994   16  1  1   61  107    -1 0.727  -0.23
 5.02 Intr + 190538 190645  108  0  0  122   66    72 0.990   8.66
 5.03 Intr + 196310 196466  157  0  1   66   81    96 0.457   5.77
 5.04 Intr + 203465 203534   70  2  1   47   64    61 0.554  -1.22
 5.05 Intr + 209567 209710  144  1  0   46   51   182 0.508  10.78
 5.06 Term + 222995 223087   93  1  0   51   45    94 0.215  -0.77
 5.07 PlyA + 223208 223213    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  65857  65607  251  2  2   92   54   120 0.922   4.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:17492677_17719528|GENSCAN_predicted_peptide_1|1755_aa
XPQTFHSYLEDIINYRWELEEGKPNPLREASFQDLPLRTRVEILHRLCDYRLDADDVFDL
LKGLDADSLRVEPLGEDNSGALYWYFYGTRMYKEDPVQGKSNGELSLSSEKQEENSLASE
PQTRHGSQGPGQGTWWLLCQTEEEWRQVTESFRERTSLRERQLYKLLSEDFLPEICNMIA
QKGKRPQRTKAELHPRWMSDHLSIKPVKQEETPVLTRIEKQKRKEEEEERQILLAVQKKE
QEQMLKEERKRELEEKVKAVEVMKEHAMSVSGVCLAHSAFVFIVDRAKRRKLREERAWLL
AQGKELPPELSHLDPNSPMREEKKTKDLFELDDDFTAMYKVLDVVKAHKDSWPFLEPVDE
SYAPNYYQIIKAPMDISSMEKKLNGGLYCTKEEFVNDMKTMFRNCRKYNGESSEYTKMSD
NLERCFHRAMMKHFPGEDGDTDEEFWIREDEKREKRRSRAGRSGGSHVWTRSRDPEGSSR
KQQPMENGGKSLPPTRRAPSSGDDQSSSSTQPPRERPAVPGTFGPLRGSDPATLYGSSGV
PEPHPGEPVQQRQPFTMQPPVGINSLRGPRLGTPEEKQMCGGLTHLSNMGPHPGSLQLGQ
ISGPSQDGSMYAPAQFQPGFIPPRHGGAPARPPDFPESSEIPPSHMYRSYKYLNRVHSAV
WNGNHGATNQGPLGPDEKPHLGPGPSHQPRTLGHVMDSRVMRPPVPPNQWTEQSGFLPHG
VPSSGYMRPPCKSAGHRLQPPPVPAPSSLFGAPAQALRGVQGGDSMMDSPEMIAMQQLSS
RVCPPGVPYHPHQPAHPRLPGPFPQVAHPMSVTVSAPKPALGNPGRAPENSEAQEPENDQ
AEPLPGLEEKPPGVGTSEGVYLTQLPHPTPPLQTDCTRQSSPQERETVGPELKSSSSESA
DNCKAMKGKNPWPSDSSYPGPAAQGCVRDLSTVADRGALSENGVIGEASPCGSEGKGLGS
SGSEKLLCPRGRTLQETMPCTGQNAATPPSTDPGLTGGTVSQFPPLYMPGLEYPNSAAHY
HISPGLQGVGPVMGGKSPASHPQHFPPRGFQSNHPHSGGFPRYRPPQGMRYSYHPPPQPS
YHHYQRTPYYACPQSFSDWQRPLHPQGSPSGPPASQPPPPRSLFSDKNAMASLQGCETLN
AALTSPTRMDAVAAKVPNDGQNPGPEEEKLDESMERPESPKEFLDLDNHNAATKRQSSLS
ASEYLYGTPPPLSSGMGFGSSAFPPHSVMLQTGPPYTPQRPASHFQPRAYSSPVAALPPH
HPGATQPNGLSQEGPIYRCQEEGLGHFQAVMMEQIGTRSGIRGPFQEMYRPSGMQMHPVQ
SQASFPKTPTAATSQEEVPPHKPPTLPLDQLSSDLNYILGSRKGRGSYRKQGRKPQPKEV
VTCREDSPNSGYPKEPAALCPGIPSPCRMTHQDLSITAKLINGGVAGLVGVTCVFPIDLA
KTRLQNQHGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRL
LMEDGYGQGKSPSHKRAAAPGQACGLRLKEPDACSHRMQRNLKMEMLAGCGAGMCQVVVT
CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
VYFIGIGERILKCFD

>gi568815576r:17492677_17719528|GENSCAN_predicted_CDS_1|5268_bp
nngcctcagacattccacagctacctagaggacatcatcaactaccgctgggagctcgaa
gaagggaagcccaaccctctgagggaagccagtttccaggacctgcctcttcgcacacgg
gtggagatcctgcaccgactctgtgattaccggctggatgcagacgatgtcttcgatctt
ctaaagggcctggatgcagacagtctccgtgtggagccattgggtgaagacaattctggg
gcactatattggtatttctatggaacacgaatgtacaaagaggacccggtgcaaggaaaa
tccaatggagaactctctttgagcagtgaaaagcaggaagaaaattccttggcatccgag
ccacagacaagacatgggtcccaagggccaggccaaggtacttggtggctcctgtgccag
acagaagaggaatggagacaggtcaccgagagttttcgcgagaggacctcccttcgagaa
cggcagctctacaagctcctcagtgaggacttcctgcctgagatctgcaacatgatcgcc
cagaagggaaaacgtccacagcgcacaaaggcagagttgcatcctaggtggatgtctgac
cacctgtccatcaaacccgtcaagcaagaggagactcctgtgctgaccagaatagaaaaa
caaaagcgcaaagaggaggaagaagagcgtcagattcttctagcagtgcagaagaaggag
caggagcagatgctaaaggaagagaggaaacgcgagttggaggagaaggtcaaggcagtg
gaagtgatgaaggaacacgccatgtcagtgtctggagtgtgcttagctcactcagccttt
gtgttcattgtagatcgagcgaagaggagaaagctcagggaagaaagggcatggctgctg
gctcaaggaaaggagctccctccagaactttcccatctggaccccaattcccccatgaga
gaggaaaaaaagactaaagacctctttgagttggatgatgatttcactgctatgtataaa
gttctagacgtggtaaaggctcacaaggattcctggcccttcttggaacctgtggatgaa
tcttatgcccctaactattatcagattattaaggcccccatggatatttccagcatggag
aagaaactgaatggaggtttatactgtaccaaggaggaatttgtaaatgacatgaagacc
atgttcaggaattgtcgaaagtataatggggaaagtagtgagtataccaagatgtctgat
aatttagagaggtgtttccatcgggcaatgatgaaacattttcctggagaagatggagac
acagatgaagaattttggattcgagaggatgaaaagcgggagaaaagacggagtcgggct
gggcgaagtggtgggagccatgtttggacccgctccagggacccagaagggtccagcagg
aaacagcagcccatggagaatggaggaaagtcgttgccccccacacgccgagcgccctct
tctggggacgatcagagcagcagctccacacagcccccgcgggagaggccagcagtacca
ggaacatttggccctctgcgaggatcagatcctgccaccttgtatggctcctctggagtc
ccggagccacaccccggggagcctgtgcagcagcgtcagcctttcaccatgcagcctcca
gttggaattaacagcctccgaggacccaggctaggcacaccagaggagaagcaaatgtgc
ggggggctgacacacctttctaacatgggcccacaccctggatccttgcagcttgggcag
ataagtggcccaagtcaggatggaagcatgtatgctccagctcagttccagccaggattc
attcctccccggcatgggggggctccagcccggccaccagactttcctgaaagctcagaa
attcctcccagccatatgtatcgatcgtacaagtacctgaatcgagtacactctgccgtc
tggaatgggaaccatggtgctacgaaccaaggacccttgggcccagatgagaagccccac
ctggggccaggaccctctcaccagcctcgcactctcggtcacgtgatggattcccgagtc
atgagaccacctgtcccccccaaccagtggactgaacaatcaggcttcctacctcatgga
gttccttcctcagggtacatgcgaccgccctgcaagtctgccggacatcggttacagcca
cctccagtgccagcacccagttctttgtttggagcacctgcccaggctcttcggggggtg
cagggaggggactccatgatggacagcccagagatgattgcgatgcagcagctctcctcc
cgcgtctgccccccaggtgtgccttaccacccccaccagcctgcacacccccgtttacct
ggcccttttccgcaggtagctcacccaatgtcagtcactgtgtcagcccccaagcctgcc
ctgggcaaccctgggagggcaccggagaacagtgaagcacaagagcctgagaatgaccaa
gcagagccgttgcctggccttgaagagaaaccaccaggtgttggtacttcagagggggtc
tacctcacacaactacctcaccccacacctcccctgcagactgactgcaccaggcagagc
tcaccacaagaaagggaaacagtgggcccggagctcaaaagcagctcctccgaatctgcg
gacaactgtaaagcaatgaagggcaagaatccctggccctcggatagcagctaccccggc
ccagccgcccaagggtgcgtgagagacctctccacggtggcagacaggggcgctctatcc
gagaacggagtcattggggaagcatctccttgtggatcggaggggaagggccttggtagc
agtggttccgaaaagctgctctgccccagaggcagaacgttgcaggaaaccatgccatgc
acgggacagaacgcagcgacaccgcccagcacagaccccggtttgacgggaggcactgtg
agccagtttcccccgctgtatatgcctggcctagagtacccgaattcagctgcccattac
cacatcagtccaggcctgcagggtgtgggccctgtgatgggagggaagtccccagcatcc
catccccagcattttcccccaaggggctttcagtctaaccacccacattctggaggcttt
ccccggtatcgccccccacaaggaatgaggtattcctaccacccaccgccacagccttcc
taccaccactatcagcgaactccttactatgcctgtccacagagcttttctgactggcag
agacctctccatccccagggaagcccaagcggacccccagccagtcagcctcccccacca
aggtccctcttctcagataagaatgccatggccagtctgcaaggctgtgagacactgaat
gctgccttaacttctccaacccgtatggatgcagtggctgctaaagtcccaaatgacggg
cagaatcctggtccagaggaagagaagctggatgaatctatggagaggccagagagtccc
aaagaatttttagacctggacaaccataacgcagctaccaagcggcagagctcgttgtca
gccagcgagtatctctatggaactcctccgcctctgagttcaggaatgggatttggttca
tctgcatttccaccccacagtgtgatgctgcagacggggcctccctatacccctcagcgg
ccggccagtcactttcagcccagggcttactcttcccctgtggctgccctcccacctcac
cacccaggggccacccagcccaacggcctctctcaggagggtcccatctatcgctgccag
gaagaaggcctgggtcactttcaagctgtgatgatggaacaaattggcactagaagtgga
ataagaggacctttccaggaaatgtacagaccatcaggaatgcagatgcacccggtccag
tcgcaggcctcgttcccaaagacccccacagcagcaacatcacaggaggaggtgccgcct
cataagcctccaacacttcccctggatcagctcagcagcgatctgaactatatcctgggt
tccagaaaaggcagaggttcttaccgaaagcaggggaggaagccgcagcccaaggaggtc
gtcacttgccgggaagacagccccaacagcggctaccccaaggagccagcagccttgtgt
cctgggatccccagcccctgcagaatgacccaccaggatctgagcatcacagccaaactc
atcaatggaggtgtagcagggctcgtgggggtgacctgcgtgttccccatcgacttggcc
aagactcgcctgcagaaccagcatgggaaagccatgtacaaaggaatgatcgactgcctg
atgaagacggctcgggcggagggcttcttcggcatgtaccgaggggctgcagtgaacctc
actctggtcactccagagaaggccatcaagctggcggccaacgactttttccggcggctg
ctcatggaagatgggtatggccagggaaagtccccctctcacaagagggcagctgcacca
gggcaggcctgtggcctgcggctgaaggagcctgacgcctgttcccataggatgcagcgg
aacctgaagatggagatgcttgccgggtgtggggctgggatgtgccaggtcgtggtgacc
tgtcccatggaaatgctcaagattcagctgcaggatgctggacgcctggccgtccatcat
cagggctcggcctcagcaccctccacctccaggtcctacacaactggttcggcttccacc
cacaggcgcccctctgccaccctcattgcctgggagctgctccgcactcagggcctggct
gggctctacaggggcctgggtgccactctcctcagagacattcctttctccatcatctac
ttcccactgtttgccaaccttaacaacctggggttcaacgagctcgccggtaaggcgtcc
tttgcacattccttcgtgtcaggctgtgtggcaggttccatagctgcggtcgcagtgacg
cctctagatgttctgaaaactcgaatccaaaccctcaagaaaggcctgggcgaggacatg
tacagtgggatcaccgactgtgccaggaaactctggattcaggagggaccatctgccttc
atgaaaggcgctggctgccgggcactggtcatagcacctctctttgggattgctcaaggg
gtctattttattgggattggagagcgcatcttaaagtgttttgactag

>gi568815576r:17492677_17719528|GENSCAN_predicted_peptide_2|239_aa
MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKK
EKQIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLV
LQFAFSTDCIYYFFQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQI
DQESYLPEDIAGGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGANANRKFLD

>gi568815576r:17492677_17719528|GENSCAN_predicted_CDS_2|720_bp
atggctctcagcgatgctgacgtgcaaaagcagataaagcatatgatggctttcattgaa
caagaagccaatgagaaagcagaagaaatagatgcaaaggcagaagaagagttcaacata
gagaaaggtcggcttgtgcaaacccaaagactaaagattatggaatattatgagaagaaa
gagaaacagattgagcagcagaagaaaattcagatgtccaatttgatgaatcaagcgaga
ctcaaagtcctcagagcaagagatgaccttatcacagacctactaaatgaagcaaaacag
agactcagcaaggtggtaaaagatacaaccaggtaccaagtgctgctggatggactggtt
ctccagtttgcattttctactgactgtatctactatttcttccagggtttgtaccagttg
ctggagccccgaatgattgttcgttgcaggaaacaagatttccctctggtaaaggctgca
gtgcagaaggcaattcctatgtacaaaattgccaccaaaaacgatgttgatgtccaaatt
gaccaggagtcctacctgcctgaagacatagctggtggagttgagatctataatggagat
cgtaaaataaaggtttccaacaccctggaaagccggctggatctcatagcccagcagatg
atgccagaagtccggggagccttgtttggtgcaaatgccaacaggaagtttttggactaa

>gi568815576r:17492677_17719528|GENSCAN_predicted_peptide_3|96_aa
MGFHHLGQAGLELLTLRDERGGGGSCFRQGPPAAVSAPTRGPNLPPPPCWRVRSPRRAFV
TAGVGAGPELPDIRNGIRSGRTDQRRPRRSLRPDVT

>gi568815576r:17492677_17719528|GENSCAN_predicted_CDS_3|291_bp
atggggtttcaccatcttggccaggctggtcttgaacttctgaccttaagagatgaaaga
ggcggcggcggcagttgcttccgacagggtcccccagcggcggtgagtgctccgacccgc
ggccctaatctaccgccgccgccatgttggagggtgaggtcaccccggcgtgccttcgtc
acggccggcgtcggggcgggacctgaactacctgacatccggaacggtatccggagcgga
aggaccgaccaacggaggccccggaggtctctccgtccagatgtgacctga

>gi568815576r:17492677_17719528|GENSCAN_predicted_peptide_4|139_aa
MKIGTGSGALLKHTRKCEATLEMGNKQAEVGTVWKAQETTGKMWESLELPRDLLNGFDQN
ADSDMGDKVQVEVVSDGDKELIGNWNKGDSCYVLAKRLVAFCPCPRDLWNFKPETDDLGY
LAEEISEQQSFKRKQSIKV

>gi568815576r:17492677_17719528|GENSCAN_predicted_CDS_4|420_bp
atgaaaattggtactgggagtggggcactgcttaaacatacccgaaaatgtgaagcaact
ttggaaatgggtaacaaacaggcagaagttggaacagtgtggaaggctcaggaaacaaca
ggaaaaatgtgggagagtctggaacttcctagagacttattgaatggttttgaccaaaat
gctgacagtgatatgggcgataaagtccaagttgaggtggtctcagatggagataaggaa
cttattgggaactggaacaaaggtgactcttgctatgttttagcaaagagactggtggcg
ttttgcccctgccctagagatctgtggaactttaaacctgagacagatgatttagggtat
ctggcagaagaaatctctgagcaacaaagcttcaagaggaagcaaagcataaaagtttga

>gi568815576r:17492677_17719528|GENSCAN_predicted_peptide_5|195_aa
MHDSRGVQLDIASQSLDQEILLKVKTEIEEELKSLDKEISEAFTSTGFDRHTSPVFSPAN
PESSMEDCLAHLGEKVSQELKEPLHKALQMLLSQPVTYQAFRECTLETTVHASGWNKILV
PLVLLRQMLLELTRRGQEPLSALLQFGVTYLEDYSAEYIIQQGGWQGVTDKSYEFRSNKK
DSDGQNWESILDFLD

>gi568815576r:17492677_17719528|GENSCAN_predicted_CDS_5|588_bp
atgcatgattcacgaggggttcaactagatatagcttcacaatctctggatcaagaaatt
ttattaaaagttaaaactgaaattgaagaagagctaaaatctctggacaaagaaatttct
gaagccttcaccagcacaggctttgaccgtcacacttctccagtgttcagccctgccaat
ccagaaagctcaatggaagactgcttggcccatcttggagaaaaagtgtcccaggaactg
aaagagcctctccataaagcattgcaaatgctcctgagccagccagtgacatatcaggca
tttcgggaatgtacactggagaccacagttcatgccagcggctggaataagattttggtg
cctctggttttgctacgacaaatgcttttggaattgacaagacgtggtcaagaacctttg
agcgcactgctgcagtttggcgtgacatacctggaggactattcggcagagtacatcatt
cagcaaggtggctggcaaggagtaacagataaatcctatgagtttagaagtaacaagaag
gattcagatgggcagaattgggagagcattctggactttctggattga