GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:53:00

Sequence gi568815581f:48793418_48995766 : 202349 bp : 46.71% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -   2729   2644   86  2  2  121   94     7 0.123   3.22
 1.08 Intr -   3787   3644  144  1  0  125   93   109 0.557  15.58
 1.07 Intr -   6343   6187  157  0  1   55   75    69 0.978   2.31
 1.06 Intr -   7968   7838  131  0  2   93   61    70 0.952   4.29
 1.05 Intr -   8245   8108  138  1  0   66   68    50 0.636   1.46
 1.04 Intr -  10514  10485   30  2  0  130   76    20 0.834   3.33
 1.03 Intr -  11574  11318  257  1  2  103   18   165 0.668   8.16
 1.02 Intr -  18850  18745  106  1  1  112   99    72 0.631  10.49
 1.01 Init -  23951  23865   87  2  0   55   62    97 0.331   2.45
 1.00 Prom -  36226  36187   40                              -3.76

 2.00 Prom +  45306  45345   40                              -6.36
 2.01 Init +  48291  48470  180  2  0   92   89   151 0.915  14.79
 2.02 Intr +  49985  50143  159  1  0   40   77    59 0.527   0.18
 2.03 Intr +  54647  54749  103  1  1  118  100    45 0.994   8.45
 2.04 Intr +  54905  55038  134  0  2   52   72   216 0.983  16.76
 2.05 Intr +  55835  55960  126  1  0   46   80   171 0.997  12.98
 2.06 Intr +  57672  57760   89  2  2   59   70    86 0.997   2.67
 2.07 Intr +  58142  58211   70  2  1   75   96    69 0.926   5.58
 2.08 Intr +  59089  59211  123  0  0   80   80   134 0.990  12.58
 2.09 Intr +  61416  61490   75  2  0   65   75    85 0.836   4.61
 2.10 Intr +  62675  62770   96  1  0   80   95     9 0.586   1.01
 2.11 Intr +  66897  67032  136  2  1   49   99    65 0.883   3.84
 2.12 Intr +  68859  68887   29  1  2  121  131    -8 0.994   4.63
 2.13 Term +  69421  69588  168  0  0  114   48   115 0.982   7.98
 2.14 PlyA +  70400  70405    6                               1.05

 3.00 Prom +  72121  72160   40                              -5.16
 3.01 Init +  78134  78146   13  1  1  110   95     8 0.824   3.40
 3.02 Intr +  87703  87903  201  2  0  114   72   167 0.981  16.96
 3.03 Intr +  88282  88348   67  2  1   92   68    44 0.393   0.76
 3.04 Intr +  89929  90082  154  1  1   43  117    41 0.303   2.57
 3.05 Intr +  99213  99380  168  2  0  -13   31   187 0.116   3.04
 3.06 Intr +  99992 100039   48  1  0  103   95    -8 0.417   0.28
 3.07 Intr + 101739 101917  179  2  2  100  111   230 0.983  25.22
 3.08 Term + 102238 102352  115  1  1  116   54   138 0.812  11.24
 3.09 PlyA + 106670 106675    6                               1.05

 4.00 Prom + 108394 108433   40                              -5.46
 4.01 Init + 115087 115403  317  0  2  108   89   288 0.999  25.71
 4.02 Intr + 117391 117463   73  1  1   90   95    69 0.998   7.21
 4.03 Intr + 119417 119604  188  1  2   71   90   180 0.999  14.99
 4.04 Intr + 122659 122770  112  1  1   89  110    89 0.999  11.58
 4.05 Intr + 127743 127855  113  2  2   38   92    53 0.969  -0.12
 4.06 Intr + 129430 129520   91  1  1   97   90   138 0.952  14.90
 4.07 Term + 133547 133717  171  1  0  116   41   119 0.958   7.83
 4.08 PlyA + 135618 135623    6                               1.05

 5.15 PlyA - 136701 136696    6                               1.05
 5.14 Term - 137195 137058  138  2  0  152   42    69 0.999   6.66
 5.13 Intr - 138300 138226   75  0  0  106   72   110 0.983  10.91
 5.12 Intr - 139929 139788  142  2  1   47   69   222 0.692  16.56
 5.11 Intr - 142825 142753   73  2  1  114   39    19 0.853  -1.94
 5.10 Intr - 143707 143603  105  2  0   87   78   104 0.974   9.49
 5.09 Intr - 147645 147507  139  0  1  105   58   239 0.892  22.64
 5.08 Intr - 149140 149051   90  1  0   72   42   119 0.976   5.89
 5.07 Intr - 150558 150508   51  0  0  123  111    33 0.996   8.20
 5.06 Intr - 151421 151264  158  0  2   46   83    82 0.056   3.23
 5.05 Intr - 160994 160972   23  1  2   94   90    27 0.074   0.69
 5.04 Intr - 167570 167469  102  1  0   51   91   115 0.864   7.39
 5.03 Intr - 168402 168310   93  2  0   92  105    79 0.998   9.08
 5.02 Intr - 171063 170893  171  2  0  102   61   167 0.998  14.46
 5.01 Init - 173815 173730   86  1  2   73   91   196 0.999  16.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 151317 151264   54  0  0   62   83    79 0.929   6.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:48793418_48995766|GENSCAN_predicted_peptide_1|379_aa
MGWDCGLARWARVGLRERAAVQPLAPGCAAMSFAFPPFIPQGYKTAFGVGTNKIVTQDNR
WELPGAWYFPRASSQAREMPQCPTLESQEGENSEEKGDSSKEDPKETVALAFVRENPGAQ
NGLQNAQQQGKKKRKKKRLGLKAGEWGAMLMIGDQSIQLPAFLSSIVRRAAQQYGFREGG
EDDDWTLYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKMFPKDFRF
FPRTWCLPADWGDLQTYSRSRKNKTYICKPDSGCQGKGIFITRTVKEIKPGEDMICQLYI
SKPFIIDGFKFDLRIYVLVTSCDPLRIFVYNEGLARFATTSYSRPCTDNLDDICMHLTNY
SINKHSSNFSRDAHSGSKS

>gi568815581f:48793418_48995766|GENSCAN_predicted_CDS_1|1137_bp
atgggctgggactgcggcttggctcgctgggcaagggtagggctgcgggagcgagcggcg
gtccagcccctggcgcccgggtgcgcggccatgtcttttgcctttcctccttttattcct
caaggctacaagactgcttttggtgttggcaccaacaaaattgttacgcaagacaatagg
tgggaactaccaggggcctggtatttccccagagcctcctcccaggccagggagatgcca
cagtgcccgactttggaaagccaggaaggggaaaactccgaagagaagggggacagttcc
aaagaagatccaaaagaaaccgtcgcgctggcttttgtgagagagaacccaggggcacaa
aacggacttcagaatgcccagcagcaaggcaagaagaagaggaagaaaaagaggttagga
ttgaaagctggggaatggggagccatgttgatgattggtgatcaatctatccagctgccg
gcctttctttcttcaatagtgcgcagggctgcccaacagtacggctttagagagggaggg
gaagacgatgactggactctctattggacagattactcagtgtcactggagcgggtgatg
gaaatgaaaagttaccagaagatcaatcacttccccgggatgagtgaaatctgccggaag
gacttgctggccaggaacatgagccgcatgttaaagatgttccctaaagatttccgcttt
ttccctaggacctggtgtcttcctgctgactggggagatttgcagacctacagcaggtca
agaaaaaataagacatacatttgtaagccggattcgggctgccaagggaaaggtatattc
atcacccggacagtgaaagaaatcaaaccaggggaggatatgatctgtcagctgtatatt
tcaaagccctttatcattgatgggtttaagtttgacctacggatttatgtactggtgaca
tcctgtgaccctctcaggatttttgtgtacaatgaaggactggcccgctttgcgacgacc
tcttactcccgcccttgcacagacaacctggatgatatctgcatgcacctgactaattat
tccattaataagcacagttcaaatttcagtcgagatgcacactctggcagtaagagn

>gi568815581f:48793418_48995766|GENSCAN_predicted_peptide_2|495_aa
MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
YVMCLFASAIHPEIRHHSQLHCEGAVAYLYPSLNSFSIIVWNIKLIDEQRKLEVGWKTTR
EYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGASIPFQFRP
ENEEDILVVTTQGEVEEIEQHNKELCKENQELKDSCISLQKQNSDMQAELQKKQEELETL
QSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQEKEMEKL
VQGDQDKTEQLEQLKKENDHLFLSLTEQEPRNKKAALTVEEQLAQEVERLKAKDENFDLS
KRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQN
PGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCFNCPICDKIFPA
TEKQIFEDHVFCHSL

>gi568815581f:48793418_48995766|GENSCAN_predicted_CDS_2|1488_bp
atggaggagaccatcaaagatccccccacatcagctgtcttgctggatcactgtcatttc
tctcaggtcatctttaacagtgtggagaagttctacatccctggaggggacgtcacatgt
cattataccttcacccagcatttcatccctcgtcgaaaggattggattggcatctttaga
tatgtcatgtgcctatttgccagtgctattcatcctgaaatcagacaccattctcaactg
cactgtgaaggagctgttgcttatttatatccttcattgaattccttttccataattgtt
tggaacatcaagcttattgatgagcaacggaagctggaggtggggtggaagacaacccgt
gagtattacaccttcatgtgggttactttgcccattgacctaaacaacaaatcagctaaa
cagcaggaagtccaattcaaagcttactacctgcccaaggatgatgagtattaccagttc
tgctatgtggatgaggatggtgtggtccggggagcaagtattcctttccaattccgtcca
gaaaatgaggaagacatcctggttgttaccactcagggagaggtggaagagattgagcag
cacaacaaggagctttgcaaagaaaaccaggagctgaaggacagctgtatcagcctccag
aagcagaactcagacatgcaggctgagctccaaaagaagcaggaggagctagaaacccta
cagagcatcaataagaagttggaactgaaagtgaaagaacagaaggactattgggagaca
gagctgcttcaactgaaagaacaaaaccagaagatgtcctcagaaaatgagaagatggga
atcagagtggatcagcttcaggcccagctgtcaactcaagagaaagaaatggagaagctt
gttcagggagatcaagataagacagagcagttagagcagctgaaaaaggaaaatgaccac
ctctttctcagtttaactgaacaggagcctaggaacaagaaagcggcactaactgtggag
gagcagttagcacaagaggtggaacgccttaaggcaaaggatgaaaactttgacctgtca
aaaagactgagtgagaacgaaattatatgtaatgctctgcagagacagaaagagagattg
gaaggagaaaatgatcttttgaagagggagaacagcagattgctcagttacatgggtctg
gattttaattctttgccgtatcaagtacctacttcagatgaaggaggcgcaagacaaaat
ccaggacttgcctatggaaacccatattctggtatccaagaaagttcttcccccagcccg
ctctccatcaagaaatgccctatctgcaaagcagatgatatttgtgatcacaccttggag
caacagcagatgcagcccctttgtttcaattgtccaatttgtgacaagatcttcccagct
acagagaagcagatctttgaagaccacgtgttctgccactctctctga

>gi568815581f:48793418_48995766|GENSCAN_predicted_peptide_3|314_aa
MPGLDRDAGTQHRTWAHFIQIMKVEETAASKCNWPAVTQLHDSKVEFLLPHWVLCGQQQA
TCHHQEARHLTGILSSPSTGCETLRKSLNDALAGLCSSEPSLRYMTLTNQSVARKRNGQH
SLQALPLCELLTHRTSQRRNTGPKPESPASIRMEAGIATKLLWRERKQLRKANKSGESMT
STNGDAGILRPMRMEKVQDTWTEKMQTAGALFISPALPSYSNFPLQVARREFQTSVVSRD
IDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMG
LFCLMVAFLILFAM

>gi568815581f:48793418_48995766|GENSCAN_predicted_CDS_3|945_bp
atgcctggcctagaccgagacgcgggcacccagcaccgcacctgggcccacttcatccag
atcatgaaggtggaggagactgcagccagcaagtgcaactggccagcagtcacacagctc
catgactccaaggttgagttcctgctgcctcactgggtcctctgtggccagcaacaagcc
acgtgtcaccaccaagaggcccgacatcttacaggaatcctgtcttcaccatcaactggc
tgcgagaccttgagaaagtcacttaatgatgcactggctgggctatgctctagtgaaccc
agcctaagatacatgacgcttactaaccagtcagtagcaaggaaacggaatggccagcac
tcgcttcaggctctgcctctgtgtgagttgctgacacacagaacatcgcagaggaggaac
accgggcccaaaccggaaagccccgcctctatccgcatggaggcgggaattgccacgaag
ctcctgtggagggagaggaagcagctgcggaaagccaataagagtggggaatcgatgacg
tcaaccaatggggacgcggggatattacggccaatgagaatggagaaggtccaggacacg
tggactgaaaaaatgcagaccgccggggcattattcatttctccagctctgccttcctac
agcaacttcccactccaggtggccagacgggagttccagaccagtgttgtctcccgggac
attgacacagcagccaagtttattggtgctggggcagccacagttggtgtggctggttca
ggggctggcattggaaccgtgtttggcagcttgatcattggctatgccaggaacccgtct
ctcaagcagcagctcttctcctatgccattcttggctttgccctgtctgaggccatgggg
cttttctgtttgatggtcgccttcctcatcctcttcgccatgtga

>gi568815581f:48793418_48995766|GENSCAN_predicted_peptide_4|354_aa
MAESPTEEAATAGAGAAGPGASSVAGVVGVSGSGGGFGPPFLPDVWAAAAAAGGAGGPGS
GLAPLPGLPPSAAAHGAALLSHWDPTLSSDWDGERTAPQCLLRIKRDIMSIYKEPPPGMF
VVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPN
FYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNY
NECIRHETIRVAVCDMMEGKCPCPEPLRGVMEKSFLEYYDFYEVACKDRLHLQGQTMQDP
FGEKRGHFDYQSLLMRLGLIRQKVLERLHNENAEMDSDSSSSGTETDLHGSLRV

>gi568815581f:48793418_48995766|GENSCAN_predicted_CDS_4|1065_bp
atggcggagagtccgactgaggaggcggcaacggcgggcgccggggcggcgggccccggg
gcgagcagcgttgctggtgttgttggcgttagcggcagcggcggcgggttcgggccgcct
ttcctgccggatgtgtgggcggcggcggcggcagcgggcggggccgggggcccggggagc
ggcctggctccgctgcccgggctcccgccctcagccgctgcccacggggccgcgctgctt
agccactgggaccccacgctcagctccgactgggacggcgagcgcaccgcgccgcagtgt
ctactccggatcaagcgggatatcatgtccatttataaggagcctcctccaggaatgttc
gttgtacctgatactgttgacatgactaagattcatgcattgatcacaggcccatttgac
actccttatgaagggggtttcttcctgttcgtgtttcggtgtccgcccgactatcccatc
cacccacctcgggtcaaactgatgacaacgggcaataacacagtgaggtttaaccccaac
ttctaccgcaatgggaaagtctgcttgagtattctaggtacatggactggacctgcctgg
agcccagcccagagcatctcctcagtgctcatctctatccagtccctgatgactgagaac
ccctatcacaatgagcccggctttgaacaggagagacatccaggagacagcaaaaactat
aatgaatgtatccggcacgagaccatcagagttgcagtctgtgacatgatggaaggaaag
tgtccctgtcctgaacccctacgaggggtgatggagaagtcctttctggagtattacgac
ttctacgaggtggcctgcaaagatcgcctgcaccttcaaggccaaactatgcaggaccct
tttggagagaagcggggccactttgactaccagtccctcttgatgcgcctgggactgata
cgtcagaaagtgctggagaggctccataatgagaatgcagaaatggactctgatagcagt
tcatctgggacagagacagaccttcatgggagcctgagggtttag

>gi568815581f:48793418_48995766|GENSCAN_predicted_peptide_5|481_aa
MVATKTFALLLLSLFLAVGLGEKKEGHFSALPSLPVGSHAKVSSPQPRGPRYAEGTFISD
YSIAMDKIHQQDFVNWLLAQKGKKNDWKHNITQREARALELASQANRKEEEAVEPQSSPA
KNPSDEDLLRDLLIQELLACLLDQTNLCRLRLRNRRERDDARLGLPPWGAGGGVRDVETR
GPGSRAARGPRVGMHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQPFPSLYVLRVYP
VIVIGEEVEEAVKQENGAMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGV
DPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQ
DVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSE
IKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDLYSQEITAEEAREAL
P

>gi568815581f:48793418_48995766|GENSCAN_predicted_CDS_5|1446_bp
atggtggccacgaagacctttgctctgctgctgctgtccctgttcctggcagtgggacta
ggagagaagaaagagggtcacttcagcgctctcccctccctgcctgttggatctcatgct
aaggtgagcagccctcaacctcgaggccccaggtacgcggaagggactttcatcagtgac
tacagtattgccatggacaagattcaccaacaagactttgtgaactggctgctggcccaa
aaggggaagaagaatgactggaaacacaacatcacccagagggaggctcgggcgctggag
ctggccagtcaagctaataggaaggaggaggaggcagtggagccacagagctccccagcc
aagaaccccagcgatgaagatttgctgcgggacttgctgattcaagagctgttggcctgc
ttgctggatcagacaaacctctgcaggctcaggctgaggaaccgtcgtgaaagagatgac
gcgcggctcgggcttccgccttggggagccggcggcggagtccgggacgtggagacccgg
ggtcccggcagccgggcggcccgcgggcccagggtggggatgcaccgccgcggggtggga
gctggcgccatcgccaagaagaaacttgcagaggccaagtataaggagcgagggacggtc
ttggctgaggaccagctagcccagcccttcccttctctgtacgtgctccgagtttaccca
gtgattgtgattggggaagaagtggaggaagccgttaagcaggaaaatggggctatgtca
aagcagttggacatgttcaagaccaacctggaggaatttgccagcaaacacaagcaggag
atccggaagaatcctgagttccgtgtgcagttccaggacatgtgtgcaaccattggcgtg
gatccgctggcctctggaaaaggattttggtctgagatgctgggcgtgggggacttctat
tacgaactaggtgtccaaattatcgaagtgtgcctggcgctgaagcatcggaatggaggt
ctgataactttggaggaactacatcaacaggtgttgaagggaaggggcaagttcgcccag
gatgtcagtcaagatgacctgatcagagccatcaagaaactaaaggcacttggcactggc
ttcggcatcatccctgtgggcggcacttacctcattcagtctgttccagctgagctcaat
atggatcacaccgtggtgctgcagctggcagagaagaatggctacgtgactgtcagtgag
atcaaagccagtcttaaatgggagaccgagcgagcgcggcaagtgctggaacacctgctg
aaggaagggttggcgtggctggacttacaggccccaggggaggcccactactggctgcca
gctctcttcactgacctctactcccaggagattacagctgaggaggccagagaagccctc
ccctga