GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:25:06

Sequence gi568815586r:14842525_15050712 : 208188 bp : 38.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    473    537   65  1  2   93   77   102 0.343   6.20
 1.02 Term +   1222   1354  133  1  1   49   38   128 0.772   0.48
 1.03 PlyA +   2247   2252    6                               1.05

 2.03 PlyA -   2284   2279    6                               1.05
 2.02 Term -   8113   7954  160  0  1   97   42   152 0.570   7.93
 2.01 Init -  11778  11762   17  0  2   77  107     4 0.561   0.96
 2.00 Prom -  14976  14937   40                              -3.05

 3.02 PlyA -  15091  15086    6                               1.05
 3.01 Sngl -  21263  20613  651  2  0   43   45   309 0.974  18.02
 3.00 Prom -  21488  21449   40                             -13.78

 4.02 PlyA -  21596  21591    6                               1.05
 4.01 Sngl -  22563  21775  789  0  0   44   41   315 0.683  18.07
 4.00 Prom -  39255  39216   40                              -4.25

 5.17 PlyA -  39392  39387    6                               1.05
 5.16 Term -  39756  39615  142  2  1   99   53   164 0.986  10.42
 5.15 Intr -  40523  40448   76  0  1   57   78    31 0.973  -3.35
 5.14 Intr -  41721  41689   33  1  0   97   83    35 0.681   1.18
 5.13 Intr -  42363  42289   75  1  0   38   84    84 0.623   1.57
 5.12 Intr -  43326  43207  120  1  0   64   81   149 0.435  11.35
 5.11 Intr -  46803  46720   84  1  0   68   44   105 0.096   2.97
 5.10 Intr -  60183  60145   39  1  0   92   88    34 0.001   1.08
 5.09 Intr -  62691  62585  107  2  2   48   87    83 0.002   3.14
 5.08 Intr -  67998  67913   86  0  2   47   73    58 0.050  -2.10
 5.07 Intr -  73162  72965  198  1  0   59  111   169 0.934  14.93
 5.06 Intr -  74779  74654  126  1  0   35  116    88 0.857   6.26
 5.05 Intr -  74977  74936   42  1  0   54   95    74 0.613   2.22
 5.04 Intr -  78524  78408  117  2  0   98   42   116 0.863   7.74
 5.03 Intr -  92469  92332  138  0  0  102  119    35 0.983   7.74
 5.02 Intr -  95528  95428  101  0  2  142   92   120 0.998  16.71
 5.01 Init -  95984  95891   94  2  1   78   98   124 0.998  11.31
 5.00 Prom -  98943  98904   40                              -5.15

 6.07 PlyA -  99524  99519    6                               1.05
 6.06 Term - 100197  99998  200  1  2   88   42   159 0.140   7.88
 6.05 Intr - 102172 102002  171  2  0   33   15   185 0.106   4.69
 6.04 Intr - 102315 102252   64  0  1  107  116    47 0.956   6.77
 6.03 Intr - 105425 105349   77  0  2  110  106    58 0.999   8.12
 6.02 Intr - 107361 107278   84  1  0   93   84    99 0.992   8.87
 6.01 Init - 108188 108008  181  2  1   61   91   299 0.963  26.89
 6.00 Prom - 110890 110851   40                              -5.35

 7.00 Prom + 113159 113198   40                              -8.05
 7.01 Init + 119226 119366  141  2  0   31   94   144 0.531   9.48
 7.02 Term + 120680 120733   54  1  0  111   38    54 0.572  -0.72
 7.03 PlyA + 120888 120893    6                               1.05

 8.00 Prom + 124493 124532   40                              -3.05
 8.01 Init + 131734 131793   60  0  0   88   77    83 0.886   8.50
 8.02 Intr + 133681 133801  121  0  1   46   52   104 0.812   1.75
 8.03 Intr + 135520 135622  103  2  1   80   90    94 0.977   7.11
 8.04 Intr + 136655 136695   41  2  2  112  115    29 0.891   4.95
 8.05 Intr + 151079 151222  144  0  0   33   97    78 0.503   2.53
 8.06 Intr + 152616 152767  152  1  2   40   69   103 0.481   2.56
 8.07 Term + 156139 156237   99  0  0   58   50   101 0.164   0.45
 8.08 PlyA + 156477 156482    6                               1.05

 9.04 PlyA - 156671 156666    6                               1.05
 9.03 Term - 159347 159269   79  1  1   82   42    60 0.051  -2.94
 9.02 Intr - 159729 159623  107  0  2  110   98    38 0.070   5.09
 9.01 Init - 174768 174700   69  0  0   61   91    64 0.336   5.10
 9.00 Prom - 186469 186430   40                              -4.15

10.03 PlyA - 186499 186494    6                               1.05
10.02 Term - 194733 194600  134  1  2   30   32   181 0.737   3.97
10.01 Init - 195997 195856  142  1  1   37   91   106 0.774   4.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_1|65_aa
AREEQQEWQQASKEPDSHRCRRDCTSGFKALPPFSLLKTGPLSAQFQSPVNPNDDCQETA
YVELT

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_1|198_bp
gccagagaggagcagcaggaatggcagcaggcctccaaggagccagattctcatcgttgc
aggagagattgtacctctgggttcaaagctcttcccccattttctcttctgaagacaggc
cctctgtccgcacagttccagtctccagtgaatcctaatgacgactgtcaggagactgct
tatgtagagctgacataa

>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_2|58_aa
MNNKNWLGVTCFKGFYILSGMIRIRLANSNAYKVQAENIHDQTSLRVKGVNYEYMKNA

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_2|177_bp
atgaacaataaaaactggctaggggtgacatgctttaaaggtttctatatcctaagtgga
atgattcggatacggctggcaaactcaaatgcctacaaagtccaggcggagaatatacat
gatcaaacgagtctaagggtgaaaggtgtgaattatgagtacatgaagaatgcttga

>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_3|216_aa
MNIDAKVLNKILANQIQQHIKKLIHHDQVSFIPGMQGWFNIRKSINVIHHINRTNDKNHM
IISIDAEKAFDKIQQPFMLKTLNKLRIDGTSLKTIRAIYDKPTANNMLNGKELEAFPLKT
GTRQGCPLSPFLINTVLEVLARAIRQEKEIKRIQLGKEEVKLSLFADDMTIYLENPIVSA
QNLLKLIRNFSKILGYKINVQKSQAFLYTNNRQRAK

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_3|651_bp
atgaacattgatgcgaaagtcctcaataaaatactggcaaaccaaatccagcagcacatc
aaaaagcttatccaccacgatcaagtcagcttcatccctgggatgcaaggctggttcaac
atacgcaaatcaataaacgtaatccatcacataaacagaaccaacgacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacagcctttcatgttaaaa
actctcaataaactacgaattgatggaacgtctctcaaaacaataagagctatttatgac
aaacccacagccaataacatgctgaatgggaaagaactggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcaccattcctaatcaacacagtgttggaagttctg
gccagggcaatcaggcaagagaaagaaataaaacgtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgactatatatttagaaaaccccatcgtctcagcc
caaaatctccttaagctgataaggaacttcagcaaaatcttgggatacaaaatcaatgtg
caaaaatcacaagcattcctatacaccaataacagacagagagccaaatga

>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_4|262_aa
MVKGSIQQEELTILNVYAPNTGAARFIKQIFRDLQRDLDSHTIIMGEFNTPLSILDRSTR
QKVNKDIQDLNSALQQAYLVDIYRTFHPKSIEYTFFSAPHRTYSKIDHTVGSKALFSKCK
RTEITTNCLSDHRAIKLELGIKKITQNCITTWKLNNVLLNDYWGNNEMKAEIKMFIETNE
NKDTTYQNLWDTMKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQ
EITKIRAELKETETQKTLQKNQ

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_4|789_bp
atggtaaagggatcaattcaacaagaagagctaactatcctaaatgtatatgcacccaat
acaggagcagccagattcataaagcaaatctttagagacctacaaagagacttagattcc
cacacaataataatgggagagtttaacaccccactgtcaatattagacagatctacgaga
cagaaggttaacaaagatatccaggacttgaactcagctctgcaacaagcatacctagta
gacatctacagaactttccaccccaaatcaatagaatatacattcttctcagcaccacat
cgcacttattccaaaattgaccacacagttggcagtaaagccctcttcagcaaatgtaaa
agaacagaaatcacaacaaactgtctctcagaccacagagcaatcaaattagaactcggg
attaagaaaatcactcaaaactgcataactacatggaaactgaacaacgtgctcctgaat
gactactggggaaataatgaaatgaaggcagaaataaagatgttcattgaaaccaatgag
aacaaagacacaacataccagaatctctgggatacaatgaaagcagtgtgtagagggaaa
tttatagcactaaatgcccacaagagaaagcaggaaagatctaaaatcgacaccctaaca
tcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaattactaagatcagagcagaactgaaggagacagagacacaaaaaacacttcaaaaa
aatcaatga

>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_5|525_aa
MEAAPSRFMFLLFLLTCELAAEVAAEVEKSSDGPGAAQEPTWLTDVPAAMEFIAATEVAV
IGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITGNTICLFRLVDNEQLNLE
DEDIESIDATKLSRFIEINSLHMVTEYNPVGGKEGSTQLHENEMTVIGLFNSVIQIHLLL
IMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQ
TLDDEWDTLPTAEVSVEHVQNFCDGFLSGKLLKPYMARPRELEKEKVKHEHLLSVELLEK
SPWNPGLQHAMIAPDLCTTPDHFLKYLKPRIQEVLKASLALGMIAETLRELSELVTSTFL
DALETEMLLSAHKNGQPRASLPTAATQDPETDLQDETMKSLILLAILAALAVVTLCYGEW
QKEENFGFDIVSVLSLNWHRAQESHESMESYELNPFINRRNANTFISPQQRWRAKVQERI
RERSKPVHELNREACDDYRLCERYAMVYGYNAAYNRYFRKRRGTK

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_5|1578_bp
atggaagctgccccgtccaggttcatgttcctcttatttctcctcacgtgtgagctggct
gcagaagttgctgcagaagttgagaaatcctcagatggtcctggtgctgcccaggaaccc
acgtggctcacagatgtcccagctgccatggaattcattgctgccactgaggtggctgtc
ataggcttcttccaggatttagaaataccagcagtgcccatactccatagcatggtgcaa
aaattcccaggcgtgtcatttgggatcagcactgattctgaggttctgacacactacaac
atcactgggaacaccatctgcctctttcgcctggtagacaatgaacaactgaatttagag
gacgaagacattgaaagcattgatgccaccaaattgagccgtttcattgagatcaacagc
ctccacatggtgacagagtacaaccctgtgggtgggaaggaaggatctacacagttgcat
gaaaacgagatgactgtgattgggttattcaacagcgtaattcagattcatctcctcctg
ataatgaacaaggcctccccagagtatgaagagaacatgcacagataccagaaggcagcc
aagctcttccaggggaagattctctttattctggtggacagtggtatgaaagaaaatggg
aaggtgatatcatttttcaaactaaaggagtctcaactgccagctttggcaatttaccag
actctagatgacgagtgggatacactgcccacagcagaagtttccgtagagcatgtgcaa
aacttttgtgatggattcctaagtggaaaattgttgaaaccttacatggcgagacctaga
gaattggaaaaggagaaagttaaacacgaacaccttttgagtgttgaacttttggaaaaa
agcccttggaatccgggactccaacatgcaatgattgccccagatctctgtactacacct
gaccactttctgaaatatttgaagccgaggatacaggaagttcttaaagccagtctggct
ctggggatgatcgcagaaaccctaagagaattatctgagctggtcactagcacctttctt
gatgctttggaaacagagatgctcctgagtgcccataagaatggtcagcccagagcctct
ctccctactgctgctacacaagaccctgagactgacctgcaggacgaaaccatgaagagc
ctgatccttcttgccatcctggccgccttagcggtagtaactttgtgttatggagagtgg
cagaaagaagaaaacttcggctttgatatcgtttcagttctctctctgaactggcatcgt
gcccaggaatcacatgaaagcatggaatcttatgaacttaatcccttcattaacaggaga
aatgcaaataccttcatatcccctcagcagagatggagagctaaagtccaagagaggatc
cgagaacgctctaagcctgtccacgagctcaatagggaagcctgtgatgactacagactt
tgcgaacgctacgccatggtttatggatacaatgctgcctataatcgctacttcaggaag
cgccgagggaccaaatga

>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_6|258_aa
MTEKAPEPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVT
DPKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIV
SGLKYVQHTYRTGVKAIDSDENTIKAVDAGSRKRHKYTSDIDIDKANAQGTSFRLHQLLT
FSSQLFGFNIITLDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTDDDK
QDHLSWEWNLSIKKEWTE

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_6|777_bp
atgactgaaaaagccccagagccacatgtggaggaggatgacgatgatgagctggacagc
aagctcaattataagcctccaccacagaagtccctgaaagagctgcaggaaatggacaaa
gatgatgagagtctaattaagtacaagaaaacgctgctgggagatggtcctgtggtgaca
gatccgaaagcccccaatgtcgttgtcacccggctcaccctggtttgtgagagtgccccg
ggaccaatcaccatggaccttactggagatctggaagccctcaaaaaggaaaccattgtg
ttaaaggaaggttctgaatatagagtcaaaattcacttcaaagtgaacagggatattgtg
tcaggcctgaaatacgttcagcacacctacaggactggggtgaaagctatagactcagat
gagaatacaataaaagctgtggatgccggctctaggaaaaggcacaaatacacctctgat
atagacattgacaaggccaatgctcaggggacctcgtttagactgcatcagctgctaacg
ttcagcagtcagctttttggattcaatattatcactctggataaagcaacatttatggtt
ggcagctatggacctcggcctgaggagtatgagttcctcactccagttgaggaggctccc
aagggcatgctggcgcgaggcacgtaccacaacaagtccttcttcaccgacgatgacaag
caagaccacctcagctgggagtggaacctgtcgattaagaaggagtggacagaatga

>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_7|64_aa
MCEHDSPCDVEMHECTRKSVEPIAMGIMNNCEGISDNQVIAVHKPMESPVYIGGYGSTPS
QKNL

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_7|195_bp
atgtgcgagcatgacagcccgtgtgacgtggagatgcatgaatgtacacgcaagagtgtg
gagcctatagctatgggtattatgaataattgtgagggtatttctgataatcaggtcatt
gcagtgcataagcctatggagagcccagtgtatatcggagggtatgggagcaccccttcc
cagaaaaatctgtaa

>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_8|239_aa
MRLAFGDVYGQQDWLPMQEKVLRLEGQPHEASPVGDKGRNHSMSRWSRVLANLTIPGTGK
ASNQGPTTPRKGPPKFKQRQTRQFKSKPPKKGVKGFGDDIPGMEGLGTVTKLTQEMSVKD
IVMVNFRCHFDWLERCQMAGDALFLGVSVRVLPQEIVMASPEGASKQDKADSPQDPPSPP
LFASSRITRLKSQQTPKGEIESVIHEENEGWGSGIGISSDILVSSTDVQIGYSTKRKFW

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_8|720_bp
atgaggttagcctttggtgatgtttatggacaacaggactggcttccaatgcaggaaaag
gttctgagactggaaggacagcctcatgaagctagtccagtaggggataaaggaaggaat
cacagcatgagcaggtggtccagggtcctggccaatctcaccatccctggtactggcaag
gcttcaaaccagggtcctaccaccccacgcaaaggccctcccaagttcaagcagaggcag
actcgccaattcaagagtaaacctccaaagaaaggtgtgaaaggatttggagatgacatt
ccaggaatggaggggctaggaacagtcaccaaacttacacaagagatgtcagttaaagac
attgtgatggttaattttagatgtcactttgactggcttgagagatgccagatggctggt
gatgcattgtttctgggtgtgtctgtgagggtgcttccacaggagattgtaatggcctcc
cctgagggagcttccaagcaagacaaggctgattctcctcaggacccaccttcacctcct
ctctttgcttctagccgcataaccagactcaagtcccagcagacccctaaaggtgagata
gaaagtgtgatccacgaggagaatgaaggatggggatctggtataggcatctcctctgat
atactggtgtccagtactgatgtccagataggctattccaccaagcggaaattctggtag

>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_9|84_aa
MVLEKRDKGKSKTLKKCEEFILQPSSKHPVPPSQRSLTGSQNSISYHPSPSAIKLSKERH
FLGSGVGITVNNTGKFPVLVEVML

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_9|255_bp
atggtgcttgaaaagagggacaagggaaaatccaagacactgaaaaagtgtgaagagttt
atcttacagccttccagcaagcatccagtgcctccctctcagagaagcctcacaggcagc
caaaactctatttcctatcatcccagccccagtgccataaagctgagtaaggaaaggcat
ttcctaggaagtggagtgggtataacagtgaacaacacaggcaaattccctgtccttgtg
gaggtgatgttgtaa

>gi568815586r:14842525_15050712|GENSCAN_predicted_peptide_10|91_aa
MSTSLSAPSSGVPAWLHLLAAQSQMPTGVLPGGCCHRSFTTRPHLTVAGKVNALGGYKFG
VSAGKALVATCLLFGGPRLQRWIQKPAQVAA

>gi568815586r:14842525_15050712|GENSCAN_predicted_CDS_10|276_bp
atgagcacctccctctctgcaccctcttctggggtccctgcctggttgcatctgcttgca
gcccagtctcagatgcccactggggtgcttcctggtggctgctgccataggtcttttact
accagacctcacctaactgttgcaggcaaggtgaacgcactgggtggttacaaatttggc
gtgtcagccgggaaagctcttgtggctacctgcctgttgttcggtggcccccgactccag
cgatggatccagaagccagcccaagtggctgcctag