Result of FASTA (ccds) for pF1KE0423
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0423, 235 aa
  1>>>pF1KE0423 235 - 235 aa - 235 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0865+/-0.000837; mu= 10.4586+/- 0.051
 mean_var=82.1284+/-16.314, 0's: 0 Z-trim(108.4): 19  B-trim: 509 in 2/49
 Lambda= 0.141523
 statistics sampled from 10164 (10175) to 10164 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.313), width:  16
 Scan time:  2.270

The best scores are:                                      opt bits E(32554)
CCDS14737.1 NAA10 gene_id:8260|Hs108|chrX          ( 235) 1546 325.0 2.6e-89
CCDS47084.1 NAA11 gene_id:84779|Hs108|chr4         ( 229) 1230 260.5 6.8e-70
CCDS59179.1 NAA10 gene_id:8260|Hs108|chrX          ( 220)  781 168.8 2.6e-42
CCDS42854.1 NAA20 gene_id:51126|Hs108|chr20        ( 166)  271 64.6 4.5e-11


>>CCDS14737.1 NAA10 gene_id:8260|Hs108|chrX               (235 aa)
 initn: 1546 init1: 1546 opt: 1546  Z-score: 1716.8  bits: 325.0 E(32554): 2.6e-89
Smith-Waterman score: 1546; 100.0% identity (100.0% similar) in 235 aa overlap (1-235:1-235)

               10        20        30        40        50        60
pF1KE0 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV
              130       140       150       160       170       180

              190       200       210       220       230     
pF1KE0 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS
              190       200       210       220       230     

>>CCDS47084.1 NAA11 gene_id:84779|Hs108|chr4              (229 aa)
 initn: 1179 init1: 1070 opt: 1230  Z-score: 1368.3  bits: 260.5 E(32554): 6.8e-70
Smith-Waterman score: 1230; 81.3% identity (94.0% similar) in 235 aa overlap (1-235:1-229)

               10        20        30        40        50        60
pF1KE0 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM
       ::::::.:.::::::::::::::::::::::.::::::::::::::::.:::::::::::
CCDS47 MNIRNAQPDDLMNMQHCNLLCLPENYQMKYYLYHGLSWPQLSYIAEDEDGKIVGYVLAKM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH
       ::.::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
CCDS47 EEEPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRPALH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV
       :::::::::::::::::::::::::::::::.::::::::...:: :: .::::. ::. 
CCDS47 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLSQMADELRRQMDLK-KGGYVVLGSRENQ-
              130       140       150       160        170         

              190       200       210       220       230     
pF1KE0 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS
       :..:..  .: ::: ..:. :.:.::.:::   : .:..:::.:.::::.:::.:
CCDS47 ETQGSTLSDSEEAC-QQKNPATEESGSDSK---EPKESVESTNVQDSSESSDSTS
      180       190        200          210       220         

>>CCDS59179.1 NAA10 gene_id:8260|Hs108|chrX               (220 aa)
 initn: 1432 init1: 774 opt: 781  Z-score: 873.1  bits: 168.8 E(32554): 2.6e-42
Smith-Waterman score: 1406; 93.2% identity (93.6% similar) in 235 aa overlap (1-235:1-220)

               10        20        30        40        50        60
pF1KE0 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH
       :::::::::::::::::::::::::::::::::::::::::::::::::::::       
CCDS59 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRK-------
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KE0 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV
               .:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 --------RISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV
                   120       130       140       150       160     

              190       200       210       220       230     
pF1KE0 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS
         170       180       190       200       210       220

>>CCDS42854.1 NAA20 gene_id:51126|Hs108|chr20             (166 aa)
 initn: 242 init1: 127 opt: 271  Z-score: 312.2  bits: 64.6 E(32554): 4.5e-11
Smith-Waterman score: 271; 35.1% identity (66.2% similar) in 148 aa overlap (12-153:1-146)

               10        20        30        40        50        60
pF1KE0 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM
                  :  : :::  : :.: . .:. .   ::.   .::  .:...::...: 
CCDS42            MLSQSCNLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKA
                          10        20        30        40         

                70        80        90       100       110         
pF1KE0 EED-PDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAAL
       : .   .  :::.:.:.:    :::::: :::.   . . :  .. .:.: :: ::..:.
CCDS42 EGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEE-ISERKGGFFVDLFVRVSNQVAV
      50        60        70        80         90       100        

     120       130         140          150       160       170    
pF1KE0 HLYSNTLNFQISEVEPKYYA--DGE---DAYAMKRDLTQMADELRRHLELKEKGRHVVLG
       ..:.. :.... ..  .::.  .::   ::: :.. :..                     
CCDS42 NMYKQ-LGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE 
      110        120       130       140       150       160       

          180       190       200       210       220       230    
pF1KE0 AIENKVESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSA




235 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 10:43:24 2016 done: Thu Nov  3 10:43:24 2016
 Total Scan time:  2.270 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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