Result of FASTA (ccds) for pF1KB3853
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3853, 212 aa
  1>>>pF1KB3853 212 - 212 aa - 212 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1838+/-0.000772; mu= 13.9024+/- 0.046
 mean_var=59.3033+/-12.279, 0's: 0 Z-trim(106.8): 28  B-trim: 0 in 0/49
 Lambda= 0.166546
 statistics sampled from 9203 (9223) to 9203 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.283), width:  16
 Scan time:  2.030

The best scores are:                                      opt bits E(32554)
CCDS82244.1 AQP4 gene_id:361|Hs108|chr18           ( 296)  878 219.1 2.2e-57
CCDS11889.1 AQP4 gene_id:361|Hs108|chr18           ( 323)  878 219.1 2.4e-57
CCDS58617.1 AQP4 gene_id:361|Hs108|chr18           ( 301)  709 178.5 3.8e-45
CCDS5431.1 AQP1 gene_id:358|Hs108|chr7             ( 269)  322 85.5 3.4e-17
CCDS8792.1 AQP2 gene_id:359|Hs108|chr12            ( 271)  321 85.3   4e-17
CCDS8793.1 AQP5 gene_id:362|Hs108|chr12            ( 265)  314 83.6 1.3e-16
CCDS8919.1 MIP gene_id:4284|Hs108|chr12            ( 263)  310 82.6 2.4e-16


>>CCDS82244.1 AQP4 gene_id:361|Hs108|chr18                (296 aa)
 initn: 876 init1: 876 opt: 878  Z-score: 1143.6  bits: 219.1 E(32554): 2.2e-57
Smith-Waterman score: 911; 65.6% identity (65.6% similar) in 244 aa overlap (1-160:1-244)

               10        20        30        40        50        60
pF1KB3 MSDRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MSDRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
               70        80        90       100       110       120

                                                                   
pF1KB3 AQCLG-------------------------------------------------------
       :::::                                                       
CCDS82 AQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDS
              130       140       150       160       170       180

                                      130       140       150      
pF1KB3 -----------------------------PIIGAVLAGGLYEYVFCPDVEFKRRFKEAFS
                                    :::::::::::::::::::::::::::::::
CCDS82 KRTDVTGSIALAIGFSVAIGHLFAIYWVGPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFS
              190       200       210       220       230       240

        160       170       180       190       200       210  
pF1KB3 KAAQQTKGSYMEVEDNRSQVETDDLILKPGVVHVIDVDRGEEKKGKDQSGEVLSSV
       ::::                                                    
CCDS82 KAAQQTKGSYMEVEDNRSQVETDDLILKPGVVHVIDVDRGEEKKGKDQSGEVLSSV
              250       260       270       280       290      

>--
 initn: 331 init1: 331 opt: 331  Z-score: 433.3  bits: 87.7 E(32554): 8.2e-18
Smith-Waterman score: 331; 100.0% identity (100.0% similar) in 52 aa overlap (161-212:245-296)

              140       150       160       170       180       190
pF1KB3 VLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDDLILKPGVVHV
                                     ::::::::::::::::::::::::::::::
CCDS82 VLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDDLILKPGVVHV
          220       230       240       250       260       270    

              200       210  
pF1KB3 IDVDRGEEKKGKDQSGEVLSSV
       ::::::::::::::::::::::
CCDS82 IDVDRGEEKKGKDQSGEVLSSV
          280       290      

>>CCDS11889.1 AQP4 gene_id:361|Hs108|chr18                (323 aa)
 initn: 876 init1: 876 opt: 878  Z-score: 1143.0  bits: 219.1 E(32554): 2.4e-57
Smith-Waterman score: 878; 91.7% identity (93.1% similar) in 145 aa overlap (1-145:1-141)

               10        20        30        40        50        60
pF1KB3 MSDRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSDRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 AQCLGPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDD
       ::::: ::::    :.   :  :.:                                   
CCDS11 AQCLGAIIGA----GILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFA
              130           140       150       160       170      

>--
 initn: 594 init1: 575 opt: 588  Z-score: 766.4  bits: 149.5 E(32554): 2.3e-36
Smith-Waterman score: 588; 69.5% identity (83.0% similar) in 141 aa overlap (73-212:189-323)

             50        60        70        80         90       100 
pF1KB3 LAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFG-HISGGHINPAVT
                                     :.: .:.:.: . . :. . .:. .::: .
CCDS11 GLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVA-IGHLFAINYTGASMNPARS
      160       170       180       190        200       210       

             110       120       130       140       150       160 
pF1KB3 VAMVCTRKISIAKSVFYIAAQCLGPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQ
        . .        . ....     :::::::::::::::::::::::::::::::::::::
CCDS11 FGPAVIMGNWENHWIYWV-----GPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQ
       220       230            240       250       260       270  

             170       180       190       200       210  
pF1KB3 TKGSYMEVEDNRSQVETDDLILKPGVVHVIDVDRGEEKKGKDQSGEVLSSV
       :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TKGSYMEVEDNRSQVETDDLILKPGVVHVIDVDRGEEKKGKDQSGEVLSSV
            280       290       300       310       320   

>>CCDS58617.1 AQP4 gene_id:361|Hs108|chr18                (301 aa)
 initn: 707 init1: 707 opt: 709  Z-score: 924.0  bits: 178.5 E(32554): 3.8e-45
Smith-Waterman score: 709; 91.9% identity (92.7% similar) in 123 aa overlap (23-145:1-119)

               10        20        30        40        50        60
pF1KB3 MSDRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
                             ::::::::::::::::::::::::::::::::::::::
CCDS58                       MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
                                     10        20        30        

               70        80        90       100       110       120
pF1KB3 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
       40        50        60        70        80        90        

              130       140       150       160       170       180
pF1KB3 AQCLGPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDD
       ::::: ::::   : ::  :  :.:                                   
CCDS58 AQCLGAIIGA---GILY-LVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFA
      100          110        120       130       140       150    

>--
 initn: 594 init1: 575 opt: 588  Z-score: 766.9  bits: 149.4 E(32554): 2.1e-36
Smith-Waterman score: 588; 69.5% identity (83.0% similar) in 141 aa overlap (73-212:167-301)

             50        60        70        80         90       100 
pF1KB3 LAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFG-HISGGHINPAVT
                                     :.: .:.:.: . . :. . .:. .::: .
CCDS58 GLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVA-IGHLFAINYTGASMNPARS
        140       150       160       170        180       190     

             110       120       130       140       150       160 
pF1KB3 VAMVCTRKISIAKSVFYIAAQCLGPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQ
        . .        . ....     :::::::::::::::::::::::::::::::::::::
CCDS58 FGPAVIMGNWENHWIYWV-----GPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQ
         200       210            220       230       240       250

             170       180       190       200       210  
pF1KB3 TKGSYMEVEDNRSQVETDDLILKPGVVHVIDVDRGEEKKGKDQSGEVLSSV
       :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TKGSYMEVEDNRSQVETDDLILKPGVVHVIDVDRGEEKKGKDQSGEVLSSV
              260       270       280       290       300 

>>CCDS5431.1 AQP1 gene_id:358|Hs108|chr7                  (269 aa)
 initn: 324 init1: 234 opt: 322  Z-score: 422.3  bits: 85.5 E(32554): 3.4e-17
Smith-Waterman score: 322; 48.6% identity (80.0% similar) in 105 aa overlap (34-134:10-114)

            10        20        30        40        50        60   
pF1KB3 RPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG---
                                     ::.::.:::::  .::..:.::....    
CCDS54                      MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPV
                                    10        20        30         

               70        80        90       100       110       120
pF1KB3 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
       :...    : : .:: :::::::..:  :::::.:.:::::.... . .::: ....:: 
CCDS54 GNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYII
      40        50        60        70        80        90         

               130       140       150       160       170         
pF1KB3 AQCLGPIIG-AVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETD
       :::.: :.. :.:.:                                             
CCDS54 AQCVGAIVATAILSGITSSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDR
     100       110       120       130       140       150         

>>CCDS8792.1 AQP2 gene_id:359|Hs108|chr12                 (271 aa)
 initn: 320 init1: 222 opt: 321  Z-score: 420.9  bits: 85.3 E(32554): 4e-17
Smith-Waterman score: 321; 52.0% identity (80.0% similar) in 100 aa overlap (33-132:8-103)

             10        20        30        40        50        60  
pF1KB3 DRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGT
                                     :: .:: ::::: :.::...:::..::   
CCDS87                        MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNW---
                                      10        20        30       

             70        80        90       100       110       120  
pF1KB3 EKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQ
        . :: ... :.. :::.:.:.:: .:::::.::::::::: .   ..:. ...::.:::
CCDS87 PQALP-SVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQ
            40        50        60        70        80        90   

            130       140       150       160       170       180  
pF1KB3 CLGPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDDLI
        :: . ::.:                                                  
CCDS87 LLGAVAGAALLHEITPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERR
           100       110       120       130       140       150   

>>CCDS8793.1 AQP5 gene_id:362|Hs108|chr12                 (265 aa)
 initn: 396 init1: 213 opt: 314  Z-score: 412.0  bits: 83.6 E(32554): 1.3e-16
Smith-Waterman score: 314; 49.5% identity (77.1% similar) in 109 aa overlap (27-134:3-107)

               10        20        30        40        50        60
pF1KB3 MSDRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
                                 : : . :: ::: ::::: ::::...:::...: 
CCDS87                         MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP
                                       10        20        30      

               70        80        90       100       110       120
pF1KB3 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
       ..   ::. .. :.: :::.:.:..: .: .::::::::.:.:..   .::. .. ::.:
CCDS87 SA---LPT-ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVA
            40         50        60        70        80        90  

              130        140       150       160       170         
pF1KB3 AQCLGPIIGA-VLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETD
       :: .: : :: .: :                                             
CCDS87 AQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDS
            100       110       120       130       140       150  

>>CCDS8919.1 MIP gene_id:4284|Hs108|chr12                 (263 aa)
 initn: 289 init1: 194 opt: 310  Z-score: 406.8  bits: 82.6 E(32554): 2.4e-16
Smith-Waterman score: 310; 42.2% identity (76.5% similar) in 102 aa overlap (31-132:6-103)

               10        20        30        40        50        60
pF1KB3 MSDRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
                                     . .::.:. :::.: :..:...:::.. :.
CCDS89                          MWELRSASFWRAIFAEFFATLFYVFFGLGSSLRWA
                                        10        20        30     

               70        80        90       100       110       120
pF1KB3 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
           : :. .. ... :::..::.::  :::::.:.::::: :..   ..:. ..  :.:
CCDS89 ----PGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMA
              40        50        60        70        80        90 

              130       140       150       160       170       180
pF1KB3 AQCLGPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDD
       :: :: . ::..                                                
CCDS89 AQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDE
             100       110       120       130       140       150 




212 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 09:05:47 2016 done: Sat Nov  5 09:05:48 2016
 Total Scan time:  2.030 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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