GENSCAN 1.0	Date run:  3-Nov-116	Time: 09:19:53

Sequence gi568815583f:63177624_63405778 : 228155 bp : 43.19% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11546  11645  100  1  1   71   14   100 0.548   1.33
 1.02 Intr +  11985  12125  141  1  0   65   85   304 0.746  28.12
 1.03 Intr +  30584  30658   75  0  0  121   56    16 0.123   1.19
 1.04 Intr +  72022  72082   61  2  1   95  101    50 0.031   4.79
 1.05 Intr +  72745  72854  110  1  2   67   28    56 0.012  -2.57
 1.06 Intr +  76444  76541   98  2  2   84   82    13 0.153   0.03
 1.07 Intr +  77884  77961   78  0  0   90   87    69 0.851   6.75
 1.08 Intr +  78882  78971   90  2  0   95   94    62 0.973   7.69
 1.09 Intr +  82004  82069   66  1  0   95   94    55 0.889   5.90
 1.10 Term +  92263  92475  213  0  0   96   44    43 0.316  -2.07
 1.11 PlyA +  93946  93951    6                               1.05

 2.00 Prom +  99390  99429   40                              -5.26
 2.01 Init +  99577  99658   82  0  1   99   70   156 0.935  14.03
 2.02 Intr +  99909 100113  205  1  1   52   76   228 0.910  16.26
 2.03 Intr + 101538 101708  171  0  0   99  106    60 0.945   7.96
 2.04 Intr + 108935 109005   71  2  2   70  115    41 0.798   3.83
 2.05 Intr + 124722 124849  128  1  2   72  109    91 0.666  10.00
 2.06 Term + 127991 128158  168  1  0  114   37    44 0.508  -0.22
 2.07 PlyA + 128261 128266    6                               1.05

 3.15 PlyA - 128857 128852    6                               1.05
 3.14 Term - 132113 131862  252  2  0   89   32   126 0.310   2.74
 3.13 Intr - 144093 143894  200  1  2   67   95   108 0.851   8.47
 3.12 Intr - 161322 161196  127  0  1   87  100   117 0.975  13.05
 3.11 Intr - 162822 162665  158  1  2  100   93   199 0.999  21.33
 3.10 Intr - 163160 163097   64  2  1  127  100    60 0.867   9.39
 3.09 Intr - 164474 164379   96  2  0   76   94    97 0.998   9.31
 3.08 Intr - 167996 167854  143  0  2   94  107   255 0.999  28.07
 3.07 Intr - 169086 168907  180  1  0   64   94   221 0.999  20.14
 3.06 Intr - 176052 175936  117  1  0   53   79    54 0.131   1.44
 3.05 Intr - 182315 182241   75  0  0   28   84    92 0.132   2.29
 3.04 Intr - 190747 190629  119  0  2  134   24    63 0.438   4.61
 3.03 Intr - 191203 191032  172  2  1   21   94    95 0.325   2.40
 3.02 Intr - 198055 198035   21  2  0  118  111    -5 0.220   2.32
 3.01 Init - 204097 204013   85  1  1   91   55   148 0.222  10.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:63177624_63405778|GENSCAN_predicted_peptide_1|343_aa
MRELRGSDSEVLDLEGVCTQRNNKVKFPRLDQQKGRSEKMAKTYDYLFKLLLIGDSGVGK
TCLLFRFSEDAFNTTFISTIGILNSNPGTLNICAGWTVATFSAGQWTQRVRKDSEQSRQR
TTEEPCPATIISYLTTSTTSTAVAHLPVIPLTTILPAGRKESDLCSLAKLTFFHSIQRSL
VQHQQEIYNVSAICQGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMND
KRQVSKERGEKLAIDYGIKFLETSAKSSANVEEVGHVLIPGTSECYFIWQKGLCRGDRVK
DHEMGDYLDPSGPNVILGVLLMRGQEESEESHVMMDAEGEKVL

>gi568815583f:63177624_63405778|GENSCAN_predicted_CDS_1|1032_bp
atgcgggaactacggggctctgattctgaggtcctggatttggaaggcgtctgcacacaa
agaaataacaaagttaagttcccgcggctcgaccagcagaagggccggagcgagaagatg
gcgaagacgtacgattatctcttcaagctcctgctgatcggcgactcgggggtaggcaag
acctgcctcctgttccgcttctcagaggacgccttcaacaccaccttcatctccaccatc
ggaatcctaaactctaacccagggaccctcaacatctgtgctgggtggactgtggccaca
ttttcagctggccagtggacacagcgggtcaggaaagattccgaacaatcacgacagcgt
actacagaggagccatgccctgccaccattatctcttacctcaccacctccacaacatcc
actgctgtggctcatctccctgtcatccccctgaccaccattctgccagctggccggaaa
gaatctgatctgtgcagccttgccaagctgactttctttcactcaatccagcggtctctg
gttcaacatcagcaagagatttacaatgtttctgctatttgccagggcattatgctggtc
tatgacatcacaaatgaaaaatcctttgacaatattaaaaattggatcagaaacattgaa
gagcatgcctcttccgatgtcgaaagaatgatcctgggtaacaaatgtgatatgaatgac
aaaagacaagtgtcaaaagaaagaggggagaagctagcaattgactatgggattaaattc
ttggagacaagcgcaaaatccagtgcaaatgtagaagaggttggtcatgtcttaatcccc
ggaacctctgaatgttactttatatggcaaaaaggactttgcagaggggatcgagttaag
gatcatgagatgggagattatcttgatccaagtggacccaatgtaatcctaggggtcctt
ctcatgagaggacaggaagagtcagaagaaagccacgtgatgatggacgcagagggagaa
aaggtgctgtga

>gi568815583f:63177624_63405778|GENSCAN_predicted_peptide_2|274_aa
MAGALTSPRTPASGAGAAAWPWRFRTPAPHPEPHPPNPARAGSISRPQRAPGSVSAVAMT
AAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVIIDN
KDGPTQKYLLIFGAFVSVYIQEMFRFAYYKLLKKASEGLKSINPGETAPSMRLLAYAFMT
LVIILLHVFWGIVFFDGCEKKKWGILLIVLLTHLLVSAQTFISSYYGINLASAFIILVLM
GTWAFLAAGGSCRSLKLCLLCQDKNFLLYNQRSR

>gi568815583f:63177624_63405778|GENSCAN_predicted_CDS_2|825_bp
atggctggggccctaacgtcgccgaggacgcccgcctcgggagcaggagctgcggcgtgg
ccctggcgcttccggacacccgccccccaccccgagccccacccaccgaaccccgcccgc
gccgggagcatctcgcgtccccaacgggcccccgggtcggtttccgcggtggccatgact
gcggccgtgttcttcggctgcgccttcattgccttcgggcctgcgctcgccctttatgtc
ttcaccatcgccaccgagccgttgcgtatcatcttcctcatcgccggagctttcttctgg
ttggtgtctctactgatttcgtcccttgtttggttcatggcaagagtcattattgacaac
aaagatggaccaacacagaaatatctgctgatctttggagcgtttgtctctgtctatatc
caagaaatgttccgatttgcatattataaactcttaaaaaaagccagtgaaggtttgaag
agtataaacccaggtgagacagcaccctctatgcgactgctggcctatgctttcatgacg
ctggtcattatcttgctgcatgtattctggggcattgtattttttgatggctgtgagaag
aaaaagtggggcatcctccttatcgttctcctgacccacctgctggtgtcagcccagacc
ttcataagttcttattatggaataaacctggcgtcagcatttataatcctggtgctcatg
ggcacctgggcattcttagctgcgggaggcagctgccgaagcctgaaactctgcctgctc
tgccaagacaagaactttcttctttacaaccagcgctccagataa

>gi568815583f:63177624_63405778|GENSCAN_predicted_peptide_3|602_aa
MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFAPFSHWGSIKPWNRRCSGLAGEEEG
RAVGLSCQGLSGLWLCSDLTILLPAGLEPRAFRGNCWAKGAGTTVERRHHGQSLPGATPP
GQEREIAPATVKGATEELSAENCLDLVCTVVESGELEDGFRGDMKSAVPSESCGLAVFSV
ALATRAGLLDDPQREAGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGY
NLSANKQFLLTNNGHSVKLNLPSDMHIQGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQH
FAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQE
AFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYC
THMDDPSPREMINNFRQVQKFDERLVYTSFSQGVPLPLSRGLPAGYLEQLQPRFRKETGP
LGHRDHLPVRSSRAAIHTGDRPARGPRARIQLSQDVRGKVRSKEPLGPENVSSNNVINIA
CNSLISSQSEQASNGFEYRIIIPYVSCLMARAKLNPLAALSPHQGKEREKDSIGYSESPG
KS

>gi568815583f:63177624_63405778|GENSCAN_predicted_CDS_3|1809_bp
atgccccggcgcagcctgcacgcggcggccgtgctcctgctggtgatcttaaaggaacag
ccttccagcccggccccagtgaacggttccaagtggacttattttgcgcccttttcccac
tggggcagcatcaagccttggaaccgcaggtgcagcgggctggcaggtgaggaggaagga
cgagctgtggggctgtcctgccagggcctttcaggcctctggctgtgctccgacttgacc
attctgctacctgctggtcttgagccccgggcattcaggggcaactgctgggcgaagggt
gcaggcaccacggtggagcgcaggcaccatggccagtctcttccaggggccacaccacca
ggccaagaaagagagatagcacctgctacagtcaaaggagccactgaagaactttcagca
gagaactgtctggatctggtgtgcactgttgtggagagtggagagctggaggatggattt
agaggggacatgaagtctgcggtcccctctgagtcctgtggcttagctgtgttctctgtg
gctctagccacaagagcgggactgttggatgacccccagagagaggcaggtcctgatggg
gagaatagctggtccaagaagtacccgtcgtgtgggggcctgctgcagtcccccatagac
ctgcacagtgacatcctccagtatgacgccagcctcacgcccctcgagttccaaggctac
aatctgtctgccaacaagcagtttctcctgaccaacaatggccattcagtgaagctgaac
ctgccctcggacatgcacatccagggcctccagtctcgctacagtgccacgcagctgcac
ctgcactgggggaacccgaatgacccgcacggctctgagcacaccgtcagcggacagcac
ttcgccgccgagctgcacattgtccattataactcagacctttatcctgacgccagcact
gccagcaacaagtcagaaggcctcgctgtcctggctgttctcattgagatgggctccttc
aatccgtcctatgacaagatcttcagtcaccttcaacatgtaaagtacaaaggccaggaa
gcattcgtcccgggattcaacattgaagagctgcttccggagaggaccgctgaatattac
cgctaccgggggtccctgaccacacccccttgcaaccccactgtgctctggacagttttc
cgaaaccccgtgcaaatttcccaggagcagctgctggctttggagacagccctgtactgc
acacacatggacgacccttcccccagagaaatgatcaacaacttccggcaggtccagaag
ttcgatgagaggctggtatacacctccttctcccaaggagtgcccctcccgttgtcacgt
ggccttcctgctgggtatctggagcagttgcagcctcgcttccggaaggaaacggggcct
ctggggcacagggaccacctgccagtgcgttccagccgggctgccatccacactggagac
cgccccgcacgtggtcctcgggctcggattcagctgtcgcaggatgtgaggggaaaggtt
agaagcaaagagcccttgggacctgagaacgtttcatccaataacgtcatcaacatagcc
tgcaacagcctcatttcaagccagagtgaacaagcatcaaatggttttgagtatcgtatc
ataatcccctatgtatcctgtctgatggcaagggccaagctcaaccctttagctgcactg
tctcctcaccaagggaaagaaagagaaaaggactctataggctactcagaatcaccaggt
aaaagctaa