Result of FASTA (ccds) for pF1KE0436
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0436, 364 aa
  1>>>pF1KE0436 364 - 364 aa - 364 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5501+/-0.000927; mu= 15.0064+/- 0.056
 mean_var=67.5649+/-13.642, 0's: 0 Z-trim(105.2): 25  B-trim: 49 in 1/50
 Lambda= 0.156032
 statistics sampled from 8279 (8290) to 8279 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.255), width:  16
 Scan time:  2.230

The best scores are:                                      opt bits E(32554)
CCDS34796.1 AGPAT5 gene_id:55326|Hs108|chr8        ( 364) 2447 559.9 1.2e-159
CCDS42670.1 LCLAT1 gene_id:253558|Hs108|chr2       ( 376)  387 96.2 4.9e-20
CCDS1772.1 LCLAT1 gene_id:253558|Hs108|chr2        ( 414)  387 96.2 5.3e-20
CCDS13703.1 AGPAT3 gene_id:56894|Hs108|chr21       ( 376)  307 78.2 1.3e-14
CCDS5280.1 AGPAT4 gene_id:56895|Hs108|chr6         ( 378)  261 67.8 1.7e-11


>>CCDS34796.1 AGPAT5 gene_id:55326|Hs108|chr8             (364 aa)
 initn: 2447 init1: 2447 opt: 2447  Z-score: 2979.6  bits: 559.9 E(32554): 1.2e-159
Smith-Waterman score: 2447; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)

               10        20        30        40        50        60
pF1KE0 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRLYCVYQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRLYCVYQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 MVLFFFENYTGVQILLYGDLPKNKENIIYLANHQSTVDWIVADILAIRQNALGHVRYVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MVLFFFENYTGVQILLYGDLPKNKENIIYLANHQSTVDWIVADILAIRQNALGHVRYVLK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 EGLKWLPLYGCYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPEGTRYNPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EGLKWLPLYGCYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPEGTRYNPE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 QTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYEGKDDGGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYEGKDDGGQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 RRESPTMTEFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLIEFYESPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RRESPTMTEFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLIEFYESPD
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 PERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTWIYGTLLGCLWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTWIYGTLLGCLWV
              310       320       330       340       350       360

           
pF1KE0 TIKA
       ::::
CCDS34 TIKA
           

>>CCDS42670.1 LCLAT1 gene_id:253558|Hs108|chr2            (376 aa)
 initn: 297 init1: 209 opt: 387  Z-score: 473.2  bits: 96.2 E(32554): 4.9e-20
Smith-Waterman score: 403; 28.5% identity (58.0% similar) in 295 aa overlap (30-312:13-294)

               10        20        30            40             50 
pF1KE0 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWR----LLSAFLPARF-----YQALD
                                    : :: .     .:: :::  :     :. ..
CCDS42                  MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWIN
                                10        20        30        40   

              60        70        80        90       100       110 
pF1KE0 DRLYCVYQSMVLFFFENYTGVQILLYGDLPKNKENIIYLANHQSTVDWIVADILAIRQNA
       .::  .. .. . ..:.. ::.... ::     :  . . ::.. .::.      .: . 
CCDS42 NRLVATWLTLPVALLETMFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSY
            50        60        70        80        90       100   

             120       130       140       150       160       170 
pF1KE0 LGHVRYVLKEGLKWLPLYGCYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIF
       :   .  :: .:: .: .:  .   . :...:. : ....... .. . :   :. :.::
CCDS42 LRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIF
           110       120       130       140       150       160   

             180       190       200       210       220           
pF1KE0 PEGTRYNPEQTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKN--YLDAIYDVT
       ::::  . :..:  : :.::: . ::   ..:: ::  .   . : ...   :::..:.:
CCDS42 PEGTDLT-ENSK--SRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDIT
           170          180       190       200       210       220

     230       240       250        260       270       280        
pF1KE0 VVYEGKDDGGQRRESPTMTEFLCKECPK-IHIHIDRIDKKDVPEEQEHMRRWLHERFEIK
       :.:  .   ....       .:  . :. ::.:. :     .:  .: .. : :.:.: :
CCDS42 VAYPHNIPQSEKH-------LLQGDFPREIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEK
              230              240       250       260       270   

      290       300       310       320       330       340        
pF1KE0 DKMLIEFYESPDPERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNT
       .. :  ::..   :.   : :.::                                    
CCDS42 EERLRSFYQG---EKNFYFTGQSVIPPCKSELRVLVVKLLSILYWTLFSPAMCLLIYLYS
           280          290       300       310       320       330

>>CCDS1772.1 LCLAT1 gene_id:253558|Hs108|chr2             (414 aa)
 initn: 297 init1: 209 opt: 387  Z-score: 472.5  bits: 96.2 E(32554): 5.3e-20
Smith-Waterman score: 403; 28.5% identity (58.0% similar) in 295 aa overlap (30-312:51-332)

                10        20        30            40             50
pF1KE0  MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWR----LLSAFLPARF-----YQAL
                                     : :: .     .:: :::  :     :. .
CCDS17 VSSYCTYFIKQDSKSFGIMVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWI
               30        40        50        60        70        80

               60        70        80        90       100       110
pF1KE0 DDRLYCVYQSMVLFFFENYTGVQILLYGDLPKNKENIIYLANHQSTVDWIVADILAIRQN
       ..::  .. .. . ..:.. ::.... ::     :  . . ::.. .::.      .: .
CCDS17 NNRLVATWLTLPVALLETMFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYS
               90       100       110       120       130       140

              120       130       140       150       160       170
pF1KE0 ALGHVRYVLKEGLKWLPLYGCYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVI
        :   .  :: .:: .: .:  .   . :...:. : ....... .. . :   :. :.:
CCDS17 YLRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLI
              150       160       170       180       190       200

              180       190       200       210       220          
pF1KE0 FPEGTRYNPEQTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKN--YLDAIYDV
       :::::  . :..:  : :.::: . ::   ..:: ::  .   . : ...   :::..:.
CCDS17 FPEGTDLT-ENSK--SRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDI
               210         220       230       240       250       

      230       240       250        260       270       280       
pF1KE0 TVVYEGKDDGGQRRESPTMTEFLCKECPK-IHIHIDRIDKKDVPEEQEHMRRWLHERFEI
       ::.:  .   ....       .:  . :. ::.:. :     .:  .: .. : :.:.: 
CCDS17 TVAYPHNIPQSEKH-------LLQGDFPREIHFHVHRYPIDTLPTSKEDLQLWCHKRWEE
       260       270              280       290       300       310

       290       300       310       320       330       340       
pF1KE0 KDKMLIEFYESPDPERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVN
       :.. :  ::..   :.   : :.::                                   
CCDS17 KEERLRSFYQG---EKNFYFTGQSVIPPCKSELRVLVVKLLSILYWTLFSPAMCLLIYLY
              320          330       340       350       360       

>>CCDS13703.1 AGPAT3 gene_id:56894|Hs108|chr21            (376 aa)
 initn: 265 init1: 128 opt: 307  Z-score: 375.9  bits: 78.2 E(32554): 1.3e-14
Smith-Waterman score: 314; 25.4% identity (58.5% similar) in 272 aa overlap (45-310:44-297)

           20        30        40        50        60        70    
pF1KE0 LLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRLYCVYQSMVLFFFENYTGVQI
                                     ..:. :. ::     :......: .. .. 
CCDS13 HLLVGFVFVVSGLVINFVQLCTLALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTEC
            20        30        40        50        60        70   

           80            90       100       110       120       130
pF1KE0 LLYGDLPK----NKENIIYLANHQSTVDWIVADILAIRQNALGHVRYVLKEGLKWLPLYG
        :. :       .::. . . ::.  .:.. .  .  : ..::  . . :. : ..:: :
CCDS13 TLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIG
            80        90       100       110       120       130   

                140       150       160       170       180        
pF1KE0 C--YFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPEGTRYNPEQTKVLSAS
          :: .   .. ::. . ..  . . :.   :    :..... ::::..  . .:   :
CCDS13 WTWYFLEI--VFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRFTETKHRV---S
           140         150       160       170       180           

      190       200       210       220       230       240        
pF1KE0 QAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYEGKDDGGQRRESPTMT
       .  :: .:: :::. : :: :.  .:  :... . :.::::. ..:.       ..:.. 
CCDS13 MEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNFRGN-------KNPSLL
      190       200       210       220       230              240 

      250       260       270       280       290       300        
pF1KE0 EFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLIEFYESPDPERRKRFP
        .:  .  .  . . :.  .:.: ....  .:::. .. ::  : :.:     ...  ::
CCDS13 GILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLYQEKDA-LQEIY-----NQKGMFP
             250       260       270       280             290     

      310       320       330       340       350       360        
pF1KE0 GKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTWIYGTLLGCLWVTIKA    
       :.                                                          
CCDS13 GEQFKPARRPWTLLNFLSWATILLSPLFSFVLGVFASGSPLLILTFLGFVGAASFGVRRL
         300       310       320       330       340       350     

>>CCDS5280.1 AGPAT4 gene_id:56895|Hs108|chr6              (378 aa)
 initn: 221 init1: 131 opt: 261  Z-score: 319.9  bits: 67.8 E(32554): 1.7e-11
Smith-Waterman score: 350; 25.0% identity (58.6% similar) in 324 aa overlap (1-313:1-310)

               10        20        30        40        50          
pF1KE0 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRL-YCVYQ
       : :. .:..  . .:.   :.....   . .  .. ::   .  .... .. :: ::. .
CCDS52 MDLAGLLKSQFLCHLVFCYVFIASG-LIINTIQLFTLLLWPINKQLFRKINCRLSYCISS
               10        20         30        40        50         

      60        70            80        90       100       110     
pF1KE0 SMVLFFFENYTGVQILLYGD----LPKNKENIIYLANHQSTVDWIVADILAIRQNALGHV
       ..:... : ..:..  .. :    :  .::: : . ::.  .:.. .  :. : . ::  
CCDS52 QLVMLL-EWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGS
      60         70        80        90       100       110        

         120       130         140       150       160       170   
pF1KE0 RYVLKEGLKWLPLYGC--YFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPE
       . . :. : ..:. :   ::..   .. .:. . ..: . ..::   :    ....:  :
CCDS52 KVLAKKELAYVPIIGWMWYFTEM--VFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCE
      120       130       140         150       160       170      

           180       190       200       210       220       230   
pF1KE0 GTRYNPEQTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYE
       :::.. .. ..   :.  :  .::  ::: : :: :.  ..   ..: ..:.:: :. ..
CCDS52 GTRFTEKKHEI---SMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNFR
        180          190       200       210       220       230   

           240       250       260       270       280       290   
pF1KE0 GKDDGGQRRESPTMTEFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLI
       ..       :.::.   :  .  .  ... ::  .:.::....   :::. .. :: .  
CCDS52 NN-------ENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQE
                  240       250       260       270       280      

              300        310       320       330       340         
pF1KE0 EFYES---PD-PERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTW
       :.:..   :. :    : :   ::                                    
CCDS52 EYYRTGTFPETPMVPPRRPWTLVNWLFWASLVLYPFFQFLVSMIRSGSSLTLASFILVFF
        290       300       310       320       330       340      




364 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 09:06:14 2016 done: Thu Nov  3 09:06:14 2016
 Total Scan time:  2.230 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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