GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:22:55

Sequence gi568815588r:88835226_89048930 : 213705 bp : 39.02% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   1012   1051   40                              -3.55
 1.01 Init +   5941   6075  135  0  0   74   51    88 0.554   3.89
 1.02 Intr +   6228   6365  138  2  0   12  106    79 0.570   1.84
 1.03 Term +  16417  16644  228  0  0   65   35   172 0.774   5.25
 1.04 PlyA +  16963  16968    6                               1.05

 2.04 PlyA -  17117  17112    6                               1.05
 2.03 Term -  20593  20565   29  2  2  105   49    35 0.063  -1.44
 2.02 Intr -  30216  30143   74  2  2   43  101    91 0.313   4.03
 2.01 Init -  32978  32869  110  2  2   32  103    99 0.289   5.55
 2.00 Prom -  36824  36785   40                              -6.45

 3.00 Prom +  40647  40686   40                              -7.35
 3.01 Init +  41935  42224  290  0  2   70   73   253 0.232  18.63
 3.02 Intr +  44887  45413  527  1  2   14   75   419 0.196  24.86
 3.03 Intr +  47237  47397  161  0  2  104   68    71 0.283   5.49
 3.04 Intr +  57159  57259  101  2  2   47   53    51 0.052  -4.51
 3.05 Intr +  63139  63241  103  1  1   31   93   115 0.471   5.56
 3.06 Intr +  70218  70435  218  2  2   74  111   172 0.411  14.48
 3.07 Intr +  73477  73552   76  1  1   93   67    70 0.997   4.00
 3.08 Intr +  75691  75786   96  0  0   25  106    81 0.880   2.89
 3.09 Intr +  77876  78233  358  1  1   65   89   384 0.999  30.10
 3.10 Intr +  79309  79433  125  2  2  104   64    59 0.884   4.48
 3.11 Intr +  81455  81592  138  1  0   91   65   113 0.994   9.04
 3.12 Term +  97606  97986  381  0  0   51   51   191 0.027   5.55
 3.13 PlyA +  99022  99027    6                               1.05

 4.10 PlyA -  99875  99870    6                               1.05
 4.09 Term - 100141  99998  144  1  0   83   41   134 0.932   5.13
 4.08 Intr - 103017 102836  182  1  2  100   79   220 0.647  20.97
 4.07 Intr - 104473 104282  192  2  0   58   74   293 0.921  23.44
 4.06 Intr - 106165 106004  162  2  0   91   81   224 0.992  21.03
 4.05 Intr - 106644 106560   85  0  1  106   82    63 0.943   5.97
 4.04 Intr - 108682 108572  111  1  0   57  108   115 0.991  10.06
 4.03 Intr - 112161 112033  129  0  0   76   86   143 0.973  12.87
 4.02 Intr - 113728 113577  152  2  2   87   94   151 0.428  14.56
 4.01 Init - 120358 120223  136  1  1   42   81    89 0.040   3.95
 4.00 Prom - 146216 146177   40                              -3.95

 5.00 Prom + 149805 149844   40                              -2.55
 5.01 Init + 164597 164639   43  1  1   52  115     7 0.700   0.43
 5.02 Intr + 167600 167730  131  0  2   58   55   137 0.764   6.89
 5.03 Intr + 167804 167969  166  1  1  108   91   127 0.999  13.61
 5.04 Intr + 172475 172612  138  0  0  113   95   132 0.999  15.91
 5.05 Intr + 173664 173772  109  1  1   63  108    37 0.914   1.62
 5.06 Intr + 175314 175375   62  0  2  106   86    85 0.943   7.56
 5.07 Intr + 176774 176872   99  0  0  100   37    61 0.466   1.36
 5.08 Term + 178894 179225  332  2  2   89   40   352 0.993  24.33
 5.09 PlyA + 180041 180046    6                              -0.45

 6.02 PlyA - 180841 180836    6                               1.05
 6.01 Sngl - 183725 183312  414  2  0   76   37   265 0.349  14.28
 6.00 Prom - 193711 193672   40                              -4.55

 7.00 Prom + 194613 194652   40                              -6.85
 7.01 Init + 194931 194935    5  2  2  107   74     0 0.032   0.02
 7.02 Intr + 204174 204201   28  0  1   95   74    16 0.073  -1.90
 7.03 Term + 206867 207337  471  1  0   82   43   223 0.575  11.14
 7.04 PlyA + 211048 211053    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:88835226_89048930|GENSCAN_predicted_peptide_1|166_aa
MRTRGKQKILHLQRGVRVEEEWVLAARKWQIRSPDIPLLPQTTTEFQPTKERATNSELSK
IGFHKPVQADSSQLQPAPIHQQQELAYISVKLLESSGGISDEYQNPSWLRGKSLEVQAGG
KLQECFSSKHLSVLFQQLRQQHTFQRAQPNETKALVSCVTTQACII

>gi568815588r:88835226_89048930|GENSCAN_predicted_CDS_1|501_bp
atgaggaccaggggaaagcagaagatccttcacctccagcgaggagtaagggtggaggaa
gagtgggttctggctgctagaaaatggcaaatcagaagccctgatattcccctactacct
cagaccaccacagagtttcaacctacaaaagagagagcaacgaactcagagttgagcaaa
attggctttcacaaaccagttcaagctgactcaagccagctccagcctgctccaatacac
cagcaacaggaactggcatatatttccgttaaactccttgaatcttctggaggtatttct
gatgaatatcaaaatccttcctggctgagaggaaagtccctagaagtccaagctggtggc
aagctccaggagtgcttttctagcaaacacctgtcagtgcttttccagcagctcaggcag
cagcacaccttccagagagcccagcccaatgaaacaaaggcactggtgtcatgtgtaacg
acccaagcctgtatcatctaa

>gi568815588r:88835226_89048930|GENSCAN_predicted_peptide_2|70_aa
MLSALEHRTPSSSVLGLGLALLSPLLADILLWELVIMWDRATTTWDSKKVERLRMGILLE
DDPLSVQQPE

>gi568815588r:88835226_89048930|GENSCAN_predicted_CDS_2|213_bp
atgctttctgccctcgaacatcggactccaagttcttcagttttgggactcggactggct
ctcctttctcctctgcttgcagacatcctgttgtgggaacttgtgatcatgtgggaccga
gccactactacctgggacagcaagaaggtggaaagactgaggatgggaattctcttagag
gatgatccactctctgtacaacagccagagtga

>gi568815588r:88835226_89048930|GENSCAN_predicted_peptide_3|857_aa
MNPESIKFTNLNMIIHIQSNMLATVMEILKGVAEGNVSRFVERREFSEELLAKVRKKGKV
ALVFVARFHEMYGKLHIVVQVTTYTLDVLLCDIRLKMGPASFHLRAFSAECGKPPPPPQR
RGRRQRRRRHPGAGAGEAGTIAVTIYFPAAAAAGTVAAGSGSAGLRVGLRGRCSSPALGC
PTARRRTTHGARATGTSKAPSVGRGEGGGGTAEANERTPRRRVPVSPRCNAFQQKPPRPG
LQQPDGCQGHTAATGAAVAVAVPHGLRTPRVARPFPAVRIYSYNPRNEIAFYKKRKLMIL
AQNMRSRRNVRENNVDSVQEVLGAFLHTPPPPSHCNAGKLSRNHSQREHGIQIRGMSALG
LPDRIVGNLDHILRATELENIPVYVDLAIVYNATKKLAAMPDHTDVSLSPEERVRALSKL
GCNITISEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQ
QCAVPEKQDIMKKLKEIAFPRTDELKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRL
IEAERKRIAQMRQQQLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFST
HQNNSLLNVFADQPNKSDATNYASHSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLC
HKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQD
QHDLLTLGWIHELMPPGGKYEVQQCNRPVLLQGNPVEMTAMVGDFCLNYESDLVASICTL
ILKFKSSGYEVPLHGKHEFAAGRFPSIIFQWFLNFDVHKNHQGNLIEVQVSSFSSRDSSS
AGVRCDPGLYPFKMSFR

>gi568815588r:88835226_89048930|GENSCAN_predicted_CDS_3|2574_bp
atgaatccagaaagcataaagtttactaatttaaacatgatcatccatatccagtcaaat
atgttagcaactgtgatggagatactaaagggcgttgcagaaggaaatgtatcaagattc
gttgaaagacgtgagttctcagaggaactgctggccaaagtgaggaaaaaagggaaagtt
gcgcttgtctttgtggccagatttcatgagatgtatggaaaactgcacatcgttgtccag
gtcaccacttacactttggatgttctgctctgcgacatccgtttaaaaatgggccctgct
tccttccacctgcgagctttttctgcagaatgcgggaagccgccgccgccgccacagagg
agggggcggaggcagaggcggaggcggcacccaggggccggggcaggggaggccgggacc
atcgcagtgacaatttattttcctgcagcagcggcagcagggacggttgctgcaggttcg
gggtcggccggcctgcgcgtgggcttgcgaggacgctgttcgtcccctgcgctggggtgt
ccgacagcgaggaggagaacgacgcacggagcccgcgcgactggaaccagcaaagctcca
tctgtcggcagaggagaagggggaggaggcacggccgaggcaaacgagcggacgcctcgt
cgccgggtgccggtatcaccccgctgcaacgccttccagcaaaagccaccgcggcccggg
ttgcagcagccggacggatgccaaggccacacggcagccacgggggcagccgtcgcagtc
gccgtcccacacgggctgcggacaccaagggttgctagacccttcccagctgtaagaatt
tacagctacaatccaagaaatgagattgcattttacaagaaaagaaaactgatgattctt
gcccaaaacatgagaagtagaaggaatgtgagagaaaataatgtagattccgtccaggaa
gtgctaggtgctttcctgcacacccctcctccaccaagtcattgtaatgcaggcaagtta
tccaggaaccactcccagagggaacatggcatccaaatcagggggatgtcagctctagga
ctccctgacaggatcgtggggaacctggaccacattttgagagccactgaactagaaaac
atacctgtttatgttgatcttgcaattgtttataatgcaactaaaaagttagctgctatg
cctgaccatacagatgtttccctaagcccagaagagcgagtccgtgccctaagcaagctt
ggttgtaatatcaccatcagtgaagacatcactccacgacgttactttaggtctggagta
gagatggagaggatggcgtctgtgtatttggaagaaggaaatttggaaaatgcctttgtt
ctttataataaatttataaccttatttgtagaaaagcttcctaaccatcgagattaccag
caatgtgcagtacctgaaaagcaggatattatgaagaaactgaaggagattgcattccca
aggacagatgaattgaaaaacgaccttttaaagaaatataacgtagaataccaagaatat
ttgcaaagcaaaaacaaatataaagctgaaattctcaaaaaattggagcatcagagattg
atagaggcagaaaggaagcggattgctcagatgcgccagcagcagctagaatcggagcag
tttctgtttttcgaagatcaactcaagaagcaagagttagcccgaggtcaaatgcgaagt
cagcaaacctcagggctgtcagagcagattgatgggagcgctttgtcctgcttttccaca
caccagaacaattccttgctgaatgtatttgcagatcaacctaataaaagtgatgcaacc
aattatgctagccactctcctcctgtaaacagggccttaacgccagctgctactctaagt
gctgttcagaatttagtggttgaaggactgcgatgtgtagttttgccagaagatctttgc
cacaaatttctgcaactggcagaatctaatacagtgagaggaatagaaacctgtggaata
ctctgtggaaaactgacacataatgaatttactattacccatgtaattgtgccaaagcag
tctgcgggaccagactattgtgacatggagaatgtagaggaattattcaatgttcaggat
caacatgatctcctcactctaggatggatccatgagctcatgccgcctggtggtaaatat
gaagtacagcagtgcaacagaccagttttactccaaggaaaccctgtagagatgacagca
atggttggtgatttctgcctcaattatgaaagtgatctggtggcaagtatctgcacacta
atccttaagtttaaatctagtggctatgaggtgcccctgcatggcaagcatgaatttgca
gctggaagatttccctcgatcatattccagtggttcttaaattttgatgtacataagaat
caccagggaaatctgattgaagttcaggtttccagcttcagctccagagattctagctca
gcgggtgttagatgtgacccagggctctacccatttaaaatgagcttccgatga

>gi568815588r:88835226_89048930|GENSCAN_predicted_peptide_4|430_aa
MRNRAEPGKSLQMWQDGHCASVDSMPLSSWAILGELFVTLLGNSKESCEAAPAMCEEEDS
TALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
TLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFE
TFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDL
TDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDG
QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTM
YPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEA
GPSIVHRKCF

>gi568815588r:88835226_89048930|GENSCAN_predicted_CDS_4|1293_bp
atgaggaacagagcagagcctggcaaatccctgcagatgtggcaggatggccattgtgcc
agcgtagactccatgcctttgtcttcatgggctatcttaggagaactgtttgtgactctc
ctggggaattccaaagaatcctgtgaagcagctccagctatgtgtgaagaagaggacagc
actgccttggtgtgtgacaatggctctgggctctgtaaggccggctttgctggggacgat
gctcccagggctgttttcccatccattgtgggacgtcccagacatcagggggtgatggtg
ggaatgggacaaaaagacagctacgtgggtgacgaagcacagagcaaaagaggaatcctg
accctgaagtacccgatagaacatggcatcatcaccaactgggacgacatggaaaagatc
tggcaccactctttctacaatgagcttcgtgttgcccctgaagagcatcccaccctgctc
acggaggcacccctgaaccccaaggccaaccgggagaaaatgactcaaattatgtttgag
actttcaatgtcccagccatgtatgtggctatccaggcggtgctgtctctctatgcctct
ggacgcacaactggcatcgtgctggactctggagatggtgtcacccacaatgtccccatc
tatgagggctatgccttgccccatgccatcatgcgtctggatctggctggccgagatctc
actgactacctcatgaagatcctgactgagcgtggctattccttcgttactactgctgag
cgtgagattgtccgggacatcaaggagaaactgtgttatgtagctctggactttgaaaat
gagatggccactgccgcatcctcatcctcccttgagaagagttacgagttgcctgatggg
caagtgatcaccatcggaaatgaacgtttccgctgcccagagaccctgttccagccatcc
ttcatcgggatggagtctgctggcatccatgaaaccacctacaacagcatcatgaagtgt
gatattgacatcaggaaggacctctatgctaacaatgtcctatcagggggcaccactatg
taccctggcattgccgaccgaatgcagaaggagatcacggccctagcacccagcaccatg
aagatcaagatcattgcccctccggagcgcaaatactctgtctggatcggtggctccatc
ctggcctctctgtccaccttccagcagatgtggatcagcaaacaggaatacgatgaagcc
gggccttccattgtccaccgcaaatgcttctaa

>gi568815588r:88835226_89048930|GENSCAN_predicted_peptide_5|359_aa
MGIYQGVVNKVHFHVWFEEPEIQTAIQVTCCFLGERNLKDSGALTLSLPVHSRYCQFWVL
TSVARLSSKSVNAQVTDINSKGLELRKTVTTVETQNLEGLHHDGQFCHKPCPPGERKARD
CTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVEINCTRTQNTKCRCKPN
FFCNSTVCEHCDPCTKCEHGIIKECTLTSNTKCKEEVKRKEVQKTCRKHRKENQGSHESP
TLNPVGIEIDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQ
LLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV

>gi568815588r:88835226_89048930|GENSCAN_predicted_CDS_5|1080_bp
atgggaatctatcagggtgtggttaataaagtacatttccatgtgtggtttgaagaacct
gagatccaaactgctatacaagtgacctgctgctttcttggagagagaaatctgaaagac
agtggagccctcacattgtctttgcctgtgcacagcagatactgccaattttgggttctt
acgtctgttgctagattatcgtccaaaagtgttaatgcccaagtgactgacatcaactcc
aagggattggaattgaggaagactgttactacagttgagactcagaacttggaaggcctg
catcatgatggccaattctgccataagccctgtcctccaggtgaaaggaaagctagggac
tgcacagtcaatggggatgaaccagactgcgtgccctgccaagaagggaaggagtacaca
gacaaagcccatttttcttccaaatgcagaagatgtagattgtgtgatgaaggacatggc
ttagaagtggaaataaactgcacccggacccagaataccaagtgcagatgtaaaccaaac
tttttttgtaactctactgtatgtgaacactgtgacccttgcaccaaatgtgaacatgga
atcatcaaggaatgcacactcaccagcaacaccaagtgcaaagaggaagtgaagagaaag
gaagtacagaaaacatgcagaaagcacagaaaggaaaaccaaggttctcatgaatctcca
actttaaatcctgtaggtattgaaatagatgttgacttgagtaaatatatcaccactatt
gctggagtcatgacactaagtcaagttaaaggctttgttcgaaagaatggtgtcaatgaa
gccaaaatagatgagatcaagaatgacaatgtccaagacacagcagaacagaaagttcaa
ctgcttcgtaattggcatcaacttcatggaaagaaagaagcgtatgacacattgattaaa
gatctcaaaaaagccaatctttgtactcttgcagagaaaattcagactatcatcctcaag
gacattactagtgactcagaaaattcaaacttcagaaatgaaatccaaagcttggtctag

>gi568815588r:88835226_89048930|GENSCAN_predicted_peptide_6|137_aa
MGGNRGCTWCLWASMSSRWAWAQQTLHWERPASPAGPGAVRGLAPGPAAAVLDFSPGLSC
LPMGQGSGPAAHHAQASPTITAPCSKAPSRIDHPRAEECGSMARDWQAAPPAAPVQDPRG
EASWASESGRDLGNLYV

>gi568815588r:88835226_89048930|GENSCAN_predicted_CDS_6|414_bp
atgggcgggaaccggggctgcacatggtgcttgtgggccagcatgagttccaggtgggcg
tgggctcagcagaccctgcactgggagcggccagccagccccgccggccctggggcagtg
aggggcttagcacctgggccagcagctgctgtgcttgacttctcaccaggccttagctgc
ctccccatggggcagggctcgggacctgcagcccaccatgcccaagcctccccaacgatc
accgccccctgctctaaggctcccagtcgcattgaccatccaagggctgaggagtgcggg
agcatggcgcgggactggcaggcagctccacctgcagccccggtgcaggatccacggggt
gaagccagctgggcttctgagtctggtagggacttagggaacctttatgtctag

>gi568815588r:88835226_89048930|GENSCAN_predicted_peptide_7|167_aa
MGFWIPHGSILAHGLYNQQVEDQPGLCLSLQDSEFLPALRGSGDTFKSQGLETGTLGIYL
ALYSTLAELAPKLQDNALPTLPCHFLKQDSPWPPPLRPMASIAWHRQCSLKAQGLFSHYL
VNAARPGTLFREVGSPLTQGSCRNAIQEPKPKVGDLRSPLGALPHCG

>gi568815588r:88835226_89048930|GENSCAN_predicted_CDS_7|504_bp
atggggttttggattcctcatggttcaattttggcccatgggctctacaatcagcaggtg
gaagaccagccaggcttgtgtctttcccttcaggacagtgagttcctcccagccctgcgt
ggatctggagatactttcaagagccaaggcctggagacaggaactttaggaatctacctg
gcactctattctactctggctgagctggcacctaagctgcaagacaatgccctccccact
cttccctgccatttcctcaaacaggactccccatggccaccaccactcaggcccatggca
agtattgcctggcaccgccaatgttcactcaaggcccaaggactcttcagtcattatttg
gtgaatgctgccaggcctgggactctctttagggaagtgggctcccctctcacccagggc
agttgcagaaatgccatccaagaaccaaagccaaaagttggggacctcaggagtccactt
ggtgctctaccccactgtggctaa