Result of FASTA (ccds) for pF1KA1996
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1996, 416 aa
  1>>>pF1KA1996 416 - 416 aa - 416 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.5258+/-0.000908; mu= 13.1339+/- 0.055
 mean_var=116.5472+/-22.557, 0's: 0 Z-trim(109.5): 17  B-trim: 0 in 0/50
 Lambda= 0.118802
 statistics sampled from 10928 (10938) to 10928 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.336), width:  16
 Scan time:  3.030

The best scores are:                                      opt bits E(32554)
CCDS76290.1 ACBD5 gene_id:91452|Hs108|chr10        ( 416) 2760 483.9 1.2e-136
CCDS7154.1 ACBD5 gene_id:91452|Hs108|chr10         ( 490) 2760 483.9 1.4e-136
CCDS73079.1 ACBD5 gene_id:91452|Hs108|chr10        ( 523) 2760 483.9 1.5e-136
CCDS44368.1 ACBD5 gene_id:91452|Hs108|chr10        ( 525) 2760 483.9 1.5e-136


>>CCDS76290.1 ACBD5 gene_id:91452|Hs108|chr10             (416 aa)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 2566.5  bits: 483.9 E(32554): 1.2e-136
Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 416 aa overlap (1-416:1-416)

               10        20        30        40        50        60
pF1KA1 MTKEEAMIAYVEEMKKIIETMPMTEKVEELLRVIGPFYEIVEDKKSGRSSDITSDLGNVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MTKEEAMIAYVEEMKKIIETMPMTEKVEELLRVIGPFYEIVEDKKSGRSSDITSDLGNVL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 TSTPNAKTVNGKAESSDSGAESEEEEAQEEVKGAEQSDNDKKMMKKSADHKNLEVIVTNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 TSTPNAKTVNGKAESSDSGAESEEEEAQEEVKGAEQSDNDKKMMKKSADHKNLEVIVTNG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 YDKDGFVQDIQNDIHASSSLNGRSTEEVKPIDENLGQTGKSAVCIHQDINDDHVEDVTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 YDKDGFVQDIQNDIHASSSLNGRSTEEVKPIDENLGQTGKSAVCIHQDINDDHVEDVTGI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 QHLTSDSDSEVYCDSMEQFGQEESLDSFTSNNGPFQYYLGGHSSQPMENSGFREDIQVPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 QHLTSDSDSEVYCDSMEQFGQEESLDSFTSNNGPFQYYLGGHSSQPMENSGFREDIQVPP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 GNGNIGNMQVVAVEGKGEVKHGGEDGRNNSGAPHREKRGGETDEFSNVRRGRGHRMQHLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 GNGNIGNMQVVAVEGKGEVKHGGEDGRNNSGAPHREKRGGETDEFSNVRRGRGHRMQHLS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 EGTKGRQVGSGGDGERWGSDRGSRGSLNEQIALVLMRLQEDMQNVLQRLQKLETLTALQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 EGTKGRQVGSGGDGERWGSDRGSRGSLNEQIALVLMRLQEDMQNVLQRLQKLETLTALQA
              310       320       330       340       350       360

              370       380       390       400       410      
pF1KA1 KSSTSTLQTAPQPTSQRPSWWPFEMSPGVLTFAIIWPFIAQWLVYLYYQRRRRKLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 KSSTSTLQTAPQPTSQRPSWWPFEMSPGVLTFAIIWPFIAQWLVYLYYQRRRRKLN
              370       380       390       400       410      

>>CCDS7154.1 ACBD5 gene_id:91452|Hs108|chr10              (490 aa)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 2565.5  bits: 483.9 E(32554): 1.4e-136
Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 416 aa overlap (1-416:75-490)

                                             10        20        30
pF1KA1                               MTKEEAMIAYVEEMKKIIETMPMTEKVEEL
                                     ::::::::::::::::::::::::::::::
CCDS71 ATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEEL
           50        60        70        80        90       100    

               40        50        60        70        80        90
pF1KA1 LRVIGPFYEIVEDKKSGRSSDITSDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS71 LRVIGPFYEIVEDKKSGRSSDITSDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEE
          110       120       130       140       150       160    

              100       110       120       130       140       150
pF1KA1 VKGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGFVQDIQNDIHASSSLNGRSTEEVKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS71 VKGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGFVQDIQNDIHASSSLNGRSTEEVKP
          170       180       190       200       210       220    

              160       170       180       190       200       210
pF1KA1 IDENLGQTGKSAVCIHQDINDDHVEDVTGIQHLTSDSDSEVYCDSMEQFGQEESLDSFTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS71 IDENLGQTGKSAVCIHQDINDDHVEDVTGIQHLTSDSDSEVYCDSMEQFGQEESLDSFTS
          230       240       250       260       270       280    

              220       230       240       250       260       270
pF1KA1 NNGPFQYYLGGHSSQPMENSGFREDIQVPPGNGNIGNMQVVAVEGKGEVKHGGEDGRNNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS71 NNGPFQYYLGGHSSQPMENSGFREDIQVPPGNGNIGNMQVVAVEGKGEVKHGGEDGRNNS
          290       300       310       320       330       340    

              280       290       300       310       320       330
pF1KA1 GAPHREKRGGETDEFSNVRRGRGHRMQHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS71 GAPHREKRGGETDEFSNVRRGRGHRMQHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQ
          350       360       370       380       390       400    

              340       350       360       370       380       390
pF1KA1 IALVLMRLQEDMQNVLQRLQKLETLTALQAKSSTSTLQTAPQPTSQRPSWWPFEMSPGVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS71 IALVLMRLQEDMQNVLQRLQKLETLTALQAKSSTSTLQTAPQPTSQRPSWWPFEMSPGVL
          410       420       430       440       450       460    

              400       410      
pF1KA1 TFAIIWPFIAQWLVYLYYQRRRRKLN
       ::::::::::::::::::::::::::
CCDS71 TFAIIWPFIAQWLVYLYYQRRRRKLN
          470       480       490

>>CCDS73079.1 ACBD5 gene_id:91452|Hs108|chr10             (523 aa)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 2565.1  bits: 483.9 E(32554): 1.5e-136
Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 416 aa overlap (1-416:108-523)

                                             10        20        30
pF1KA1                               MTKEEAMIAYVEEMKKIIETMPMTEKVEEL
                                     ::::::::::::::::::::::::::::::
CCDS73 ATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEEL
        80        90       100       110       120       130       

               40        50        60        70        80        90
pF1KA1 LRVIGPFYEIVEDKKSGRSSDITSDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LRVIGPFYEIVEDKKSGRSSDITSDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEE
       140       150       160       170       180       190       

              100       110       120       130       140       150
pF1KA1 VKGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGFVQDIQNDIHASSSLNGRSTEEVKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VKGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGFVQDIQNDIHASSSLNGRSTEEVKP
       200       210       220       230       240       250       

              160       170       180       190       200       210
pF1KA1 IDENLGQTGKSAVCIHQDINDDHVEDVTGIQHLTSDSDSEVYCDSMEQFGQEESLDSFTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IDENLGQTGKSAVCIHQDINDDHVEDVTGIQHLTSDSDSEVYCDSMEQFGQEESLDSFTS
       260       270       280       290       300       310       

              220       230       240       250       260       270
pF1KA1 NNGPFQYYLGGHSSQPMENSGFREDIQVPPGNGNIGNMQVVAVEGKGEVKHGGEDGRNNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NNGPFQYYLGGHSSQPMENSGFREDIQVPPGNGNIGNMQVVAVEGKGEVKHGGEDGRNNS
       320       330       340       350       360       370       

              280       290       300       310       320       330
pF1KA1 GAPHREKRGGETDEFSNVRRGRGHRMQHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GAPHREKRGGETDEFSNVRRGRGHRMQHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQ
       380       390       400       410       420       430       

              340       350       360       370       380       390
pF1KA1 IALVLMRLQEDMQNVLQRLQKLETLTALQAKSSTSTLQTAPQPTSQRPSWWPFEMSPGVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IALVLMRLQEDMQNVLQRLQKLETLTALQAKSSTSTLQTAPQPTSQRPSWWPFEMSPGVL
       440       450       460       470       480       490       

              400       410      
pF1KA1 TFAIIWPFIAQWLVYLYYQRRRRKLN
       ::::::::::::::::::::::::::
CCDS73 TFAIIWPFIAQWLVYLYYQRRRRKLN
       500       510       520   

>>CCDS44368.1 ACBD5 gene_id:91452|Hs108|chr10             (525 aa)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 2565.0  bits: 483.9 E(32554): 1.5e-136
Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 416 aa overlap (1-416:110-525)

                                             10        20        30
pF1KA1                               MTKEEAMIAYVEEMKKIIETMPMTEKVEEL
                                     ::::::::::::::::::::::::::::::
CCDS44 ATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEEL
      80        90       100       110       120       130         

               40        50        60        70        80        90
pF1KA1 LRVIGPFYEIVEDKKSGRSSDITSDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LRVIGPFYEIVEDKKSGRSSDITSDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEE
     140       150       160       170       180       190         

              100       110       120       130       140       150
pF1KA1 VKGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGFVQDIQNDIHASSSLNGRSTEEVKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VKGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGFVQDIQNDIHASSSLNGRSTEEVKP
     200       210       220       230       240       250         

              160       170       180       190       200       210
pF1KA1 IDENLGQTGKSAVCIHQDINDDHVEDVTGIQHLTSDSDSEVYCDSMEQFGQEESLDSFTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IDENLGQTGKSAVCIHQDINDDHVEDVTGIQHLTSDSDSEVYCDSMEQFGQEESLDSFTS
     260       270       280       290       300       310         

              220       230       240       250       260       270
pF1KA1 NNGPFQYYLGGHSSQPMENSGFREDIQVPPGNGNIGNMQVVAVEGKGEVKHGGEDGRNNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NNGPFQYYLGGHSSQPMENSGFREDIQVPPGNGNIGNMQVVAVEGKGEVKHGGEDGRNNS
     320       330       340       350       360       370         

              280       290       300       310       320       330
pF1KA1 GAPHREKRGGETDEFSNVRRGRGHRMQHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GAPHREKRGGETDEFSNVRRGRGHRMQHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQ
     380       390       400       410       420       430         

              340       350       360       370       380       390
pF1KA1 IALVLMRLQEDMQNVLQRLQKLETLTALQAKSSTSTLQTAPQPTSQRPSWWPFEMSPGVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IALVLMRLQEDMQNVLQRLQKLETLTALQAKSSTSTLQTAPQPTSQRPSWWPFEMSPGVL
     440       450       460       470       480       490         

              400       410      
pF1KA1 TFAIIWPFIAQWLVYLYYQRRRRKLN
       ::::::::::::::::::::::::::
CCDS44 TFAIIWPFIAQWLVYLYYQRRRRKLN
     500       510       520     




416 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 07:00:05 2016 done: Sat Nov  5 07:00:06 2016
 Total Scan time:  3.030 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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