GENSCAN 1.0	Date run:  7-Nov-116	Time: 14:29:23

Sequence gi568815575f:23954969_24176782 : 221814 bp : 42.96% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    271    266    6                               1.05
 1.03 Term -  12420  12079  342  0  0  -16   36   238 0.203   1.73
 1.02 Intr -  14562  14349  214  2  1   44   61   141 0.005   4.80
 1.01 Init -  19849  19485  365  1  2   -1   53   192 0.075   3.37
 1.00 Prom -  26630  26591   40                              -4.65

 2.03 PlyA -  28776  28771    6                               1.05
 2.02 Term -  34062  32953 1110  0  0  113   39   870 0.737  75.66
 2.01 Init -  51725  51021  705  2  0   38   96   558 0.788  46.58
 2.00 Prom -  57685  57646   40                              -6.15

 3.00 Prom +  71112  71151   40                              -4.35
 3.01 Init +  71468  71583  116  1  2   28   53   147 0.240   4.93
 3.02 Intr +  75734  75869  136  2  1   29   52   151 0.249   5.25
 3.03 Term +  79643  79759  117  1  0  101   48   131 0.612   7.96
 3.04 PlyA +  79992  79997    6                               1.05

 4.00 Prom +  85371  85410   40                              -4.05
 4.01 Init +  88617  88710   94  2  1   83   69    65 0.613   4.69
 4.02 Term +  94632  95224  593  1  2  -27   36   336 0.477  10.60
 4.03 PlyA +  95737  95742    6                               1.05

 5.00 Prom +  97989  98028   40                              -7.15
 5.01 Init +  98166  98259   94  2  1   83   69    65 0.533   4.69
 5.02 Intr + 102453 102580  128  1  2   87  121   136 0.999  16.28
 5.03 Intr + 102665 102786  122  1  2   32   60   112 0.731   1.17
 5.04 Intr + 105120 105214   95  0  2   53   67    95 0.731   2.59
 5.05 Intr + 107448 107606  159  1  0   46  116   157 0.848  13.34
 5.06 Intr + 109233 109367  135  1  0   77  111    91 0.995   9.92
 5.07 Intr + 111030 111124   95  1  2   75   93   103 0.999   8.26
 5.08 Intr + 112996 113140  145  0  1   96   87    83 0.999   7.93
 5.09 Intr + 116590 116759  170  2  2   55   94   136 0.997   9.64
 5.10 Intr + 118123 118295  173  0  2  100  115   108 0.932  12.52
 5.11 Term + 121754 121817   64  2  1   77   49    60 0.646  -2.62
 5.12 PlyA + 122478 122483    6                               1.05

 6.00 Prom + 163688 163727   40                              -3.25
 6.01 Init + 178315 178481  167  0  2   80   25   200 0.957  12.06
 6.02 Intr + 178541 178746  206  2  2   97   75    78 0.969   5.32
 6.03 Intr + 185401 185570  170  2  2   51  105    78 0.707   4.54
 6.04 Term + 185602 185676   75  0  0   71   48    76 0.674  -1.24
 6.05 PlyA + 186070 186075    6                               1.05

 7.00 Prom + 188696 188735   40                              -7.55
 7.01 Init + 194333 194569  237  1  0   86    2   228 0.800  10.06
 7.02 Term + 195573 195755  183  2  0   87   41   121 0.879   3.86
 7.03 PlyA + 195832 195837    6                               1.05

 8.03 PlyA - 196042 196037    6                               1.05
 8.02 Term - 197576 197494   83  0  2   93   43    41 0.500  -3.02
 8.01 Init - 198639 198567   73  0  1   71   94    68 0.831   6.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:23954969_24176782|GENSCAN_predicted_peptide_1|306_aa
MCTRITHGCCGNTRSDSGVQDKARESAFPTGSQVRPLELLGCTAGVSGILQSCCISHWLC
RKSVSPSPISPTPASTTARKTMGDPDEAETHFPWWPVGRSWARGRRWLKIPPLSLGRPLD
GSALATIIKIDYIAALIVALKNRVRLLKKTHRTRNDKAYKSTLCYKERTHYSKSMKVKLY
TKQTTPKGAWRSQPEDAIEKKNSFSEEKLKLAAEMCIINKEPKNPEKTMGKMSPGHVRDL
CGSPSHHRPRGLGGKKWFRETRVPCRVQPRDLVSCILAAPALAKRGQGTARAMTSGCKPQ
ALAAST

>gi568815575f:23954969_24176782|GENSCAN_predicted_CDS_1|921_bp
atgtgcacacgaatcacccacggatgttgtggaaatactcgttctgattcaggggtccag
gataaggcacgagagtctgcgtttccaacaggctctcaggtgcggcctttggagctgctg
ggctgcacagcaggggtctctgggatcctgcagagctgttgcatttcccactggctttgc
agaaagtctgtgtcaccaagtcctatatcacccacacctgccagcaccactgctagaaag
acaatgggggacccagacgaggcagaaactcatttcccctggtggcctgtgggaaggagc
tgggctcgaggcaggaggtggcttaagattcctcctctgtcccttggacggcccttggat
ggaagtgcccttgcaacaattataaaaatagactatatagctgcactaatagtggcactt
aaaaacagggttcgattgctaaagaagactcataggacccgaaatgataaagcttacaag
tctacgctttgttacaaggaaaggacccactatagcaagagcatgaaagtcaagctatac
accaagcagacgactccaaaaggggcctggagaagccagcctgaagatgcgatagaaaag
aaaaactcattttctgaggagaaattgaagctggctgcagaaatgtgcataattaacaag
gagccaaaaaatcccgaaaaaacgatgggtaaaatgtctccaggacatgtcagagacctt
tgtggcagcccctcccatcacaggcccagaggcttaggaggaaaaaaatggtttcgtgag
accagggtcccctgccgtgtgcagcctagggacttggtgtcctgcatcctagctgctcca
gctttggctaaaaggggccaaggtacagctcgggccatgacttcagggtgcaagccccaa
gccttggcagcttccacgtag

>gi568815575f:23954969_24176782|GENSCAN_predicted_peptide_2|604_aa
MAGDVEGFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQAHKALLATQSDYFRIMF
TADMRERDQDKIHLKGLTATGFSHVLQFMYYGTIELSMNTVHEILQAAMYVQLIEVVKFC
CSFLLAKICLENCAEIMRLLDDFGVNIEGVREKLDTFLLDNFVPLMSRPDFLSYLSFEKL
MSYLDNDHLSRFPEIELYEAVQSWLRHDRRRWRHTDTIIQNIRFCLMTPTSVFEKVKTSE
FYRYSRQLRYEVDQALNYFQNVHQQPLLDMKSSRIRSAKPQTTVFRGMIGHSMVNSKILL
LKKPRVWWELEGPQVPLRPDCLAIVNNFVFLLGGEELGPDGEFHASSKVFRYDPRQNSWL
QMADMSVPRSEFAVGVIGKFIYAVAGRTRDETFYSTERYDITNDKWEFVDPYPVNKYGHE
GTVLNNKLFITGGITSSSTSKQVCVFDPSKEGTIEQRTRRTQVVTNCWENKSKMNYARCF
HKMISYNGKLYVFGGVCVILRASFESQGCPSTEVYNPETDQWTILASMPIGRSGHGVTVL
DKQIMVLGGLCYNGHYSDSILTFDPDENKWKEDEYPRMPCKLDGLQVCNLHFPDYVLDEV
RRCN

>gi568815575f:23954969_24176782|GENSCAN_predicted_CDS_2|1815_bp
atggcaggggacgtggaaggattctgttcctccatccacgacaccagtgtctctgctggg
ttcagagcactgtatgaggagggattgcttcttgatgtcactctggttattgaagatcat
cagttccaggcccataaagcactcttggccacccagagtgattacttcagaattatgttt
actgcagacatgagggaacgagatcaggacaaaattcatttaaaaggtctaacagctacc
ggtttcagccatgtcctgcaatttatgtactatggaactatagagctgagtatgaatacc
gttcatgagattcttcaggctgccatgtatgttcaacttatagaagtggtgaagttctgc
tgctcttttctcttagcgaagatctgcctagaaaattgtgcagaaattatgagactctta
gatgatttcggcgtaaacatcgagggagtcagggagaagttagacacctttctgctagac
aactttgtgccactcatgtctaggcctgactttctgtcctatctgagctttgagaagctc
atgtcttacttggataatgatcatctgagcaggttcccagagatagagctgtacgaggct
gtgcagtcttggctgcggcatgatagaagacgctggagacataccgataccatcattcag
aatatccggttttgcttgatgaccccaaccagcgtttttgagaaggttaagacatcagaa
ttttatagatactcccgacagctccgttacgaagttgaccaagcattgaattactttcag
aatgttcaccagcagcctttgttggatatgaagtcaagccgcatccgttctgcaaaaccg
caaactacagtatttcgaggaatgattggacatagcatggttaacagtaaaatacttctc
ttaaagaaaccaagagtctggtgggagctagaaggcccacaagtacctctgcgacctgac
tgccttgctatcgtcaataattttgtgttcctgttaggcggggaagagctgggcccggat
ggtgaattccatgcttcttccaaagtattcaggtatgacccgagacagaactcctggctg
cagatggcagatatgtctgtaccacgctctgaatttgctgtaggtgttattgggaagttt
atttacgccgtagcaggcagaaccagagatgagactttctattcaactgagagatatgac
atcaccaacgataaatgggaatttgtggatccttatccagttaacaaatatggacatgag
gggacagtgctcaataacaaattgtttatcaccggtggaatcacctcatcttccacctcc
aagcaagtgtgcgtgtttgaccccagcaaagaagggaccatagaacaacggaccaggaga
actcaagtggttaccaactgttgggagaataagagcaagatgaattacgcgagatgcttt
cacaagatgatttcttacaatggcaagctttatgtcttcggtggtgtctgtgtgatcttg
agggcctctttcgaatctcagggatgcccttctacagaagtatacaacccagagactgat
cagtggaccatcttggcatccatgccgattggtagaagtggccatggtgtgactgtgctg
gacaaacaaataatggttcttggaggcctttgttataatggtcattacagcgattccatc
ctcacttttgatccggatgaaaacaagtggaaggaagatgagtaccctcggatgccctgc
aagctggatggtttacaagtatgcaacctgcattttccggactatgtactggatgaggtc
aggcgttgcaactaa

>gi568815575f:23954969_24176782|GENSCAN_predicted_peptide_3|122_aa
MASLSGKSVDDGNTQLEARGSTINLKLGHPLPIADPKLSFSYEIIKGLSVQRGLGFVAQQ
CEGVIREKIQDCQGDREGVASEIRMTAYRVEEANRSPQCTRWSPTAPAPDGHVAAAGLNE
TL

>gi568815575f:23954969_24176782|GENSCAN_predicted_CDS_3|369_bp
atggcatctctttctgggaaaagtgtagatgacggaaatacacagttggaagcccgtgga
tctacaattaaccttaaattagggcatccattgcccatagcagatcctaaactgagcttc
agttatgagattatcaaggggctgagtgtacagcgaggactgggctttgtggcgcagcaa
tgtgagggagtcatccgggagaagatacaggactgtcaaggagacagagaaggagtagcc
agtgagataagaatgacagcttatagagtggaggaggcaaaccggtcccctcaatgtacc
agatggtcacctacagcaccagctccagatggccacgtggctgcagctgggctcaatgaa
actctgtga

>gi568815575f:23954969_24176782|GENSCAN_predicted_peptide_4|228_aa
MDGAESHYSQQSNAGAENQIPHVTTYKWELSGALQPTTALWEPLSGLAKAGAHSLSLQGG
VEGEARAGTGAACGACGPAGVPGGRGLGGPCTRSSQPALLAPGNEGLSTRASSCGGCTGS
PSSASPPALLSISHGALAAFPQDRARDLQPAMPEPPTHSMGSCAAPASPRSTTPCSTAPS
PIDHPRAEECERTAQDWQAAPPAAPVPDPLGGASWAPESGGDVESLYV

>gi568815575f:23954969_24176782|GENSCAN_predicted_CDS_4|687_bp
atggatggagccgaaagccattattctcagcaaagtaacgcaggagcagaaaaccaaata
ccgcatgttaccacttataagtgggagctgagtggagcccttcagcccaccactgcactg
tgggagcccctttctgggctggccaaggctggagcccactccctcagcttgcaaggaggt
gtggagggagaggcccgagcgggaaccggggctgcatgcggcgcttgcgggccagctgga
gttccgggtgggcgtgggcttggcgggccctgcactcggagcagtcagccagccctgctg
gccccgggcaatgagggacttagcacccgggccagcagctgcggagggtgtactgggtcc
cccagcagtgccagcccgccggcgctgctctcgatttctcacggagccttagctgccttc
ccgcaggacagggctcgggacctgcagcccgccatgcctgagcctcccacccactccatg
ggctcctgtgcggccccagcctccccgaggagcaccaccccctgctccacagcgcccagt
cccatcgaccacccaagggctgaggaatgcgagcgcacggcgcaggactggcaggcagct
ccacctgcagccccggtgccggatccactgggtggagccagctgggctcctgagtctggt
ggggacgtggagagtctttatgtctag

>gi568815575f:23954969_24176782|GENSCAN_predicted_peptide_5|459_aa
MDGAESHYSQQSNAGAENQIPHVTTYKWELSGTIGHVAHGKSTVVKAISGVHTVRFKNEL
ERNITIKLGYANAKIYKLDDPSCPRPECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFV
DCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKID
LVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSE
PRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKP
IFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEI
SYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPV
CTEVGEKIALSRRVEKHWRLIGWGQIRRGVTIKPTVDDD

>gi568815575f:23954969_24176782|GENSCAN_predicted_CDS_5|1380_bp
atggatggagccgaaagccattattctcagcaaagtaacgcaggagcagaaaaccaaata
ccgcatgttaccacttataagtgggagctgagtggtacaattggtcatgtagctcatggg
aaatccacagtcgtcaaagctatttctggagttcatactgtcaggttcaaaaatgaacta
gaaagaaatattacaatcaagcttggatatgctaatgctaagatttataagcttgatgac
ccaagttgccctcggccagaatgttatagatcttgtgggagcagtacacctgacgagttt
cctacggacattccagggaccaaagggaacttcaaattagtcagacatgtttcctttgtt
gactgtcctggccacgatattttgatggctactatgctgaacggtgcagcagtgatggat
gcagctcttctgttgatagctggtaatgaatcttgccctcagcctcagacatcggaacac
ctggctgctatagagatcatgaaactgaagcatattttgattctacaaaataaaattgat
ttggtaaaagaaagtcaggctaaagaacaatacgagcagatccttgcatttgtccaaggt
acagtagcagagggagctcccattattccaatttcagctcagctgaaatacaatattgaa
gttgtttgtgagtacatagtaaagaaaattccagtacccccaagagactttacttcagag
ccccggcttattgttattagatcttttgatgtcaacaaacctggctgtgaagttgatgac
cttaagggaggtgtagctggtggtagtatcctaaaaggagtattaaaggtgggccaggag
atagaagtaagacctggtattgtttccaaagatagtgaaggaaaactcatgtgtaaacca
atcttttccaaaattgtatcactttttgcggagcataatgatctgcaatatgctgctcca
ggcggtcttattggagttggaacaaaaattgaccccactttgtgccgggctgacagaatg
gtggggcaagtacttggtgcagtcggagctttacctgagatattcacagaattggaaatt
tcctatttcctgcttagacggcttctaggtgtacgcactgaaggagacaagaaagcagca
aaggttcaaaagctgtctaagaatgaagtgctcatggtgaacataggatccctgtcaaca
ggagggagagttagtgctgtcaaggccgatttgggtaaaattgttttgaccaatccagtg
tgcacagaggtaggagaaaaaattgcccttagccgaagagttgaaaaacactggcgttta
attggttggggtcagataagaagaggagtgacaatcaagccaacagtagatgatgactga

>gi568815575f:23954969_24176782|GENSCAN_predicted_peptide_6|205_aa
MLLKVNLEALHPWWPVPAGTRGCGHLAPQSAPSHRPQAMAVPDRMYQVTGQALDRRDLDM
GAQHHTLAHWRRLQPASAVPQIHQVPAAPPRPAPSAQAMLHYQEDQHLLLVAGASHPSVP
HINSVICLSVHEQQNLDGAPGVLVTDFGSLTQYALLVAWLQWAAGSLRSPPKQLPTQFRL
EPAPTGFLIASEEQSLKFDNCIQIG

>gi568815575f:23954969_24176782|GENSCAN_predicted_CDS_6|618_bp
atgctccttaaagtgaacttagaggctctacatccctggtggccagtgcctgctgggacc
agaggctgtggccatctggccccccagtcagccccaagtcatcgcccccaggcaatggct
gtgcctgacagaatgtaccaggtcactggacaggcactcgataggagagacctagacatg
ggtgcccagcaccacaccctggcccactggaggagattacagccagcaagtgcagttcca
caaatccatcaagttcctgctgctccaccgcgtcctgcaccatcagcacaagccatgctt
cactaccaagaggaccaacaccttctgctagttgcaggggcctctcaccccagtgtgccc
catataaactcggtgatttgtctttctgtgcacgagcagcagaacctagatggagcccct
ggtgttttagtaacagattttggttccctgacccagtatgctttgcttgtggcttggctg
cagtgggctgctgggagtctcagaagccctcctaagcagctgcccacccaatttaggctg
gagccagccccaacagggttcctgattgcctcggaagaacagtctttgaaatttgacaac
tgcatccagataggatga

>gi568815575f:23954969_24176782|GENSCAN_predicted_peptide_7|139_aa
MVGGGRAACLSAGSADRGPARALRPRRRRQRRVCGGGGRERGGGGKKGGAVTETPAAGDP
AAARPLGSPVAGRERRRHGLSCRRRPPPPPGRRDRFTLSAPGPAPSPAPVATRGQSGQVA
FRTPGLTRAYGTPGNVIFA

>gi568815575f:23954969_24176782|GENSCAN_predicted_CDS_7|420_bp
atggtggggggcggccgggccgcctgcctctccgcggggtcggccgaccgcggccccgcg
cgggctttacggccgaggcggcggcggcagcggcgcgtgtgtggcggcggcgggcgggag
cgcggaggaggtggaaagaaggggggcgctgtcacggagactccggccgccggagacccc
gccgcagcgaggccactgggctccccggtcgcggggcgggagcggcgccgacacgggctg
agctgccgcaggcggccaccgccgccgcccggacgccgggaccgtttcaccctcagcgcc
cctggccctgcgccttcccccgcgcctgtagccacccgagggcagtcggggcaggtggca
ttccggacacctgggcttaccagggcatacgggaccccaggaaatgttatttttgcttaa

>gi568815575f:23954969_24176782|GENSCAN_predicted_peptide_8|51_aa
MLCKFPNLGNTGFKNKWGAKKVKTALSWSTAAHDLLQSRKMEKLKMGIYAT

>gi568815575f:23954969_24176782|GENSCAN_predicted_CDS_8|156_bp
atgctgtgcaagtttcccaatttgggtaatactggatttaagaataagtggggtgcaaag
aaagtgaagacagccctttcatggagcaccgctgctcacgacctgttacagtctagaaaa
atggaaaaactgaaaatgggtatctatgccacctaa