GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:02:54

Sequence gi568815590f:127638263_127840955 : 202693 bp : 44.61% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    392    387    6                               1.05
 1.03 Term -   4941   4859   83  1  2   88   33    94 0.157   1.76
 1.02 Intr -  14930  14622  309  0  0   42   21   245 0.144   9.48
 1.01 Init -  19913  19868   46  2  1   48   78    40 0.786  -0.14
 1.00 Prom -  20386  20347   40                              -4.86

 2.00 Prom +  21185  21224   40                              -5.06
 2.01 Init +  22691  22797  107  1  2   83   36   111 0.676   5.09
 2.02 Intr +  32114  32190   77  2  2   50   93    26 0.006  -1.54
 2.03 Intr +  50826  50886   61  1  1  108  101     5 0.349   1.59
 2.04 Term +  53903  54272  370  2  1   49   38   174 0.434   2.62
 2.05 PlyA +  54560  54565    6                               1.05

 3.00 Prom +  55530  55569   40                              -3.36
 3.01 Init +  57076  57121   46  0  1   79   72    81 0.869   4.81
 3.02 Intr +  57846  57969  124  1  1   79   63   106 0.261   6.84
 3.03 Intr +  97490  97574   85  2  1   63   66    77 0.021   2.82
 3.04 Intr +  98133  98361  229  2  1   63  115   107 0.905   8.34
 3.05 Intr +  99107  99287  181  0  1    7   34   147 0.617   0.13
 3.06 Intr +  99592  99814  223  1  1  104   19    76 0.851   0.43
 3.07 Intr +  99986 100757  772  1  1   66  107  1383 0.516 129.05
 3.08 Term + 102134 102696  563  0  2   60   49   652 0.944  53.04
 3.09 PlyA + 102991 102996    6                               1.05

 4.00 Prom + 105425 105464   40                              -2.96
 4.01 Init + 120060 120120   61  2  1   86   59    46 0.802   2.91
 4.02 Term + 125735 125844  110  0  2   51   54    96 0.662   1.17
 4.03 PlyA + 126708 126713    6                               1.05

 5.02 PlyA - 127621 127616    6                               1.05
 5.01 Sngl - 132484 131888  597  1  0   80   32   186 0.904   8.40
 5.00 Prom - 141392 141353   40                              -3.36

 6.00 Prom + 142108 142147   40                              -6.66
 6.01 Init + 156303 156472  170  2  2   61  100   243 0.876  19.81
 6.02 Term + 157541 157727  187  2  1   21   50   164 0.973   2.86
 6.03 PlyA + 159371 159376    6                               1.05

 7.00 Prom + 159567 159606   40                              -4.26
 7.01 Init + 164586 164831  246  2  0   52   75   117 0.552   4.40
 7.02 Intr + 171943 172077  135  0  0  132   69    -1 0.313   3.16
 7.03 Intr + 178566 178622   57  2  0   78  111    12 0.126   1.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  78462  78381   82  2  1  123   35    32 0.842  -1.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:127638263_127840955|GENSCAN_predicted_peptide_1|145_aa
MSFAATWMKLEALILSTRDLVNNEWFVVEATREAGTGDIDEEKRKALALKGVNYQPKEHG
LYPVGVGEWWKGFIQMQNRIGLIFRKSIQQQCGGQMAVGEEGVRNSSYDTTERENKDDGQ
WYGSTLADVMVDGNCDEQHYDASYI

>gi568815590f:127638263_127840955|GENSCAN_predicted_CDS_1|438_bp
atgtcttttgcagcaacttggatgaagctggaggcccttattctaagcactagggacctg
gtgaacaatgagtggtttgtggtagaggctacaagggaggcagggacgggggacattgat
gaggagaagagaaaggcgctggctttgaagggtgttaactaccagcctaaagaacacggg
ctctatccggtaggtgttggggaatggtggaagggttttattcaaatgcagaacaggatt
ggacttatatttaggaagagcatccagcagcagtgtggagggcagatggctgtgggcgag
gaaggagtcaggaacagtagttatgacaccaccgaaagagagaataaagatgatggccaa
tggtatggcagcacattggcagatgttatggtagatggaaactgtgatgaacaacactat
gatgccagttacatttag

>gi568815590f:127638263_127840955|GENSCAN_predicted_peptide_2|204_aa
MDVNGSKKEEKINTLNQSDLLSQSWNPMRHEFKCRNSKSSALRETSQVPTTAHQALRDVA
PDWAPVYRVSIIYCCITNELKIQHQQRKVLNGFPLPASFSALHLTVNVNTGSPGWHIKGP
IDLLTQFAETAPCTTTLAAAVEKPFGHTSQKLLVHSLQLLLEPPVLPALDSETFLHHALR
HPLQSSTGGLESCVCYGQRITKAF

>gi568815590f:127638263_127840955|GENSCAN_predicted_CDS_2|615_bp
atggatgtcaatggcagcaagaaagaagagaaaataaacacactcaaccagtcggatctg
ctgagtcaatcatggaatccaatgagacacgaattcaaatgccgcaactcaaaatcttct
gcacttagagaaacatcccaagtccctaccacagcccaccaggccctacgtgacgtggcc
ccagactgggctcctgtttacagagtttccattatctactgctgcataacaaatgaactt
aaaattcagcatcagcagagaaaagttctaaatggatttcctttgccggcatcattttct
gccctacatctgaccgtcaacgtaaatacaggcagccctggttggcatataaaaggccca
attgacctgttgacccagtttgcagagacggctccatgcacaaccactttagcagctgct
gtagaaaaaccttttggccacacaagccaaaagctgctcgttcattcactgcaattactc
cttgagcccccagtgctcccggcactggactcagagacattcctgcaccatgctttgaga
cacccacttcagtctagcactggtggacttgagtcctgcgtctgttatggacaaagaata
acaaaggctttttag

>gi568815590f:127638263_127840955|GENSCAN_predicted_peptide_3|740_aa
MVLKMGLSIMPALYPSIMVTNMETTFGHFLKELPAFGEYRHECRLSQHQMEGSEKEGTRM
RFVKQYCYGGAAEKGRGFEREQKKMPAVRNPCRIHETLPIAAGGHFALELTTPEQGRDSP
DAGRLFCPFGDTSPPLPGPASLKGSPCSCLDAGFFSGSGKPALTPLPRPPSGVLAPEMRR
NCEERGSGRFQNSCYPWWGGSGGGIAAGSLAQLHLRIECEGRWRKTLCLGFWQIVFLTAT
SRGFLRAPGPISIPLPLRGRLPGFALRAPGGAGARRAPSRWFTKCVSEIAGDCPKGQPPA
TMPLNVSFTNRNYDLDYDSVQPYFYCDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTP
PLSPSRRSGLCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDP
DDETFIKNIIIQDCMWSGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQ
DLSAAASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLV
LHEETPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKR
CHVSTHQHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTH
NVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDL
LRKRREQLKHKLEQLRNSCA

>gi568815590f:127638263_127840955|GENSCAN_predicted_CDS_3|2223_bp
atggtgctgaagatggggctgtccatcatgcctgcactgtaccccagtattatggtcacg
aatatggaaaccacatttggtcatttcctcaaggagctgccggcatttggagaatacaga
catgaatgcagactatctcagcatcagatggaaggcagtgagaaggaagggacaaggatg
cggtttgtcaaacagtactgctacggaggagcagcagagaaagggagagggtttgagagg
gagcaaaagaaaatgccagcggtccgcaacccttgccgcatccacgaaactttgcccata
gcagcgggcgggcactttgcactggaacttacaacacccgagcaaggacgcgactctccc
gacgcggggaggctattctgcccatttggggacacttccccgccgctgccaggacccgct
tctctgaaaggctctccttgcagctgcttagacgctggatttttttcgggtagtggaaaa
ccagccctgactcccctgccgcggccgccctcgggtgtcctcgcgcccgagatgcggagg
aactgcgaggagcggggctctgggcggttccagaacagctgctacccttggtggggtggc
tccgggggaggtatcgcagcggggtctctggcgcagttgcatctccgtattgagtgcgaa
gggaggtggcgcaaaactttgtgccttggattttggcaaattgttttcctcaccgccacc
tcccgcggcttcttaagggcgccagggccgatttcgattcctctgccgctgcggggccga
ctcccgggctttgcgctccgggctcccgggggagcgggggctcggcgggcaccaagccgc
tggttcactaagtgcgtctccgagatagcaggggactgtccaaaggggcagcctcccgcg
acgatgcccctcaacgttagcttcaccaacaggaactatgacctcgactacgactcggtg
cagccgtatttctactgcgacgaggaggagaacttctaccagcagcagcagcagagcgag
ctgcagcccccggcgcccagcgaggatatctggaagaaattcgagctgctgcccaccccg
cccctgtcccctagccgccgctccgggctctgctcgccctcctacgttgcggtcacaccc
ttctcccttcggggagacaacgacggcggtggcgggagcttctccacggccgaccagctg
gagatggtgaccgagctgctgggaggagacatggtgaaccagagtttcatctgcgacccg
gacgacgagaccttcatcaaaaacatcatcatccaggactgtatgtggagcggcttctcg
gccgccgccaagctcgtctcagagaagctggcctcctaccaggctgcgcgcaaagacagc
ggcagcccgaaccccgcccgcggccacagcgtctgctccacctccagcttgtacctgcag
gatctgagcgccgccgcctcagagtgcatcgacccctcggtggtcttcccctaccctctc
aacgacagcagctcgcccaagtcctgcgcctcgcaagactccagcgccttctctccgtcc
tcggattctctgctctcctcgacggagtcctccccgcagggcagccccgagcccctggtg
ctccatgaggagacaccgcccaccaccagcagcgactctgaggaggaacaagaagatgag
gaagaaatcgatgttgtttctgtggaaaagaggcaggctcctggcaaaaggtcagagtct
ggatcaccttctgctggaggccacagcaaacctcctcacagcccactggtcctcaagagg
tgccacgtctccacacatcagcacaactacgcagcgcctccctccactcggaaggactat
cctgctgccaagagggtcaagttggacagtgtcagagtcctgagacagatcagcaacaac
cgaaaatgcaccagccccaggtcctcggacaccgaggagaatgtcaagaggcgaacacac
aacgtcttggagcgccagaggaggaacgagctaaaacggagcttttttgccctgcgtgac
cagatcccggagttggaaaacaatgaaaaggcccccaaggtagttatccttaaaaaagcc
acagcatacatcctgtccgtccaagcagaggagcaaaagctcatttctgaagaggacttg
ttgcggaaacgacgagaacagttgaaacacaaacttgaacagctacggaactcttgtgcg
taa

>gi568815590f:127638263_127840955|GENSCAN_predicted_peptide_4|56_aa
MKNEDTVLTQMSFHEYSALQIIPGDASCHFDGCTLERPTEEEPMSPANSQQRPEKT

>gi568815590f:127638263_127840955|GENSCAN_predicted_CDS_4|171_bp
atgaaaaatgaggacacggttctgacacaaatgagtttccatgaatacagtgccttacaa
atcatcccaggggacgccagctgccactttgatggctgcactttggagaggcccacagag
gaggaaccaatgtctccagccaacagtcagcaaagacctgagaagacctga

>gi568815590f:127638263_127840955|GENSCAN_predicted_peptide_5|198_aa
MDLLPKVIYRFNAIPIKLPMTFFTELEKTTLKFTWNPKRAHIAKSILSQKKKAGGTMLPD
FKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIIPHIYNHLIFDKPDKNKKWGKDSLFNK
WCWENWLAICRKLKLNPFLTPYTKINSTWINDLNVRPNTIKTLEENLGNTIQDIGMGKDF
MSKTQKAMATKAKIDNGI

>gi568815590f:127638263_127840955|GENSCAN_predicted_CDS_5|597_bp
atggacttactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcacatggaacccaaaaagagcc
cacattgccaagtcaatcctaagccaaaagaaaaaagctggaggcaccatgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagaccaatggaacagaacagagccctcagaaataataccacacatctacaaccat
ctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactgaatcccttccttaca
ccttatacaaaaattaattcaacatggattaacgacttaaatgttagacctaataccata
aaaaccctagaagaaaacttaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacacaaaaagcgatggcaacaaaagccaaaattgacaatgggatctaa

>gi568815590f:127638263_127840955|GENSCAN_predicted_peptide_6|118_aa
MGPRAGRARGGRDEEGRRRAASKDVPRDPRHLPVDFLAERMLAVPVTCGDTARSALHPVV
IANLSKALISQEGGCINPQNPEWNFLQDLLGEKPSRKLQKDKYRIRVWEKPRGLVSII

>gi568815590f:127638263_127840955|GENSCAN_predicted_CDS_6|357_bp
atgggcccgcgggccgggcgggctcggggcggccgggacgaggaggggcgacgacgagct
gcgagcaaagatgtgccccgggacccccggcaccttccagtggatttccttgcggaaagg
atgttggcggtccctgtgacctgtggagacacggccagatctgccctccatcctgtggtc
atagcgaatctttctaaagctctgatcagtcaagaagggggttgtatcaatcctcagaac
cctgagtggaactttctacaggatttattaggagaaaaaccttcccggaagctgcagaag
gacaaatacagaatccgtgtctgggagaaacctcgtggcctggtctccattatttga

>gi568815590f:127638263_127840955|GENSCAN_predicted_peptide_7|146_aa
MGPQPTRPAVAQKLEETRPGGKEDTGVLGLSLGLGDSSGLAVQRFKALDCKSTKVAGGVG
GGGKGRWGEGEGQDILESLNNQALQRPYLFLFMTLEIPYILSALGRHSLHADLVKKEKPR
SILHLPPSFTEIPCCLQLPLPLCIML

>gi568815590f:127638263_127840955|GENSCAN_predicted_CDS_7|438_bp
atgggaccacagccaaccaggcctgctgtagcccagaagctggaagagactcgcccagga
gggaaggaagacactggggtgttgggtctcagtctgggtcttggtgacagcagtgggctg
gcagtgcagaggttcaaggccttggactgcaagtccactaaggtggctggtggtgtgggt
ggaggtggaaaaggcaggtggggcgagggtgaggggcaggacatcctggagagcctgaat
aaccaggccttgcaaaggccatatctcttccttttcatgactctggaaattccatacata
ctttctgcattaggaagacattctctgcatgctgatctcgttaaaaaggaaaagccaagg
agcatcctgcacctccctcctagctttacagaaattccatgctgccttcagcttcctttg
ccgctctgcatcatgttg