GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:57:25

Sequence gi568815596f:48246215_48475440 : 229226 bp : 39.43% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -     11      6    6                               1.05
 1.05 Term -    435    344   92  1  2  102   38    55 0.002  -1.20
 1.04 Intr -   8269   8176   94  1  1  104   45    59 0.007   1.82
 1.03 Intr -   9845   9750   96  2  0  111   97    17 0.047   4.19
 1.02 Intr -  24329  24211  119  0  2   59   28   147 0.357   5.06
 1.01 Init -  31713  31653   61  0  1   72  116    70 0.967   9.66
 1.00 Prom -  32115  32076   40                              -4.55

 2.05 PlyA -  32368  32363    6                               1.05
 2.04 Term -  55907  55528  380  0  2    6   41   311 0.150  12.17
 2.03 Intr -  56278  56125  154  1  1   89   94    38 0.100   3.22
 2.02 Intr -  68029  67900  130  0  1  -58   55   185 0.265   0.38
 2.01 Init -  68554  68169  386  1  2   59   66   195 0.426  10.77
 2.00 Prom -  77758  77719   40                              -2.75

 3.00 Prom +  89096  89135   40                              -4.15
 3.01 Init + 100001 100537  537  1  0   35   86   349 0.442  24.31
 3.02 Intr + 112833 112933  101  2  2   68   78    89 0.618   3.89
 3.03 Intr + 115963 115999   37  1  1   93   93    -6 0.397  -2.25
 3.04 Intr + 116939 117013   75  1  0   74   29    93 0.328   0.79
 3.05 Intr + 117349 117379   31  0  1   73  115    14 0.707  -0.61
 3.06 Intr + 127078 127146   69  2  0  105  101    50 0.963   6.24
 3.07 Term + 128706 129229  524  1  2  106   43   602 0.998  50.95
 3.08 PlyA + 131074 131079    6                               1.05

 4.00 Prom + 131283 131322   40                              -5.75
 4.01 Sngl + 138977 139243  267  1  0   72   53   370 0.999  26.89
 4.02 PlyA + 139714 139719    6                               1.05

 5.00 Prom + 140068 140107   40                              -8.55
 5.01 Sngl + 142442 142876  435  1  0   43   51   286 0.433  16.42
 5.02 PlyA + 143218 143223    6                               1.05

 6.00 Prom + 145716 145755   40                              -4.15
 6.01 Init + 149530 149665  136  0  1   59   95   125 0.751  10.65
 6.02 Intr + 156845 156948  104  0  2   96   10    45 0.399  -3.53
 6.03 Intr + 157267 157443  177  0  0   77   49    64 0.269   0.59
 6.04 Intr + 160971 161061   91  2  1   92   86    69 0.468   5.75
 6.05 Term + 164562 164857  296  1  2   16   55   243 0.576   8.28
 6.06 PlyA + 165123 165128    6                               1.05

 7.04 PlyA - 165157 165152    6                               1.05
 7.03 Term - 170208 170102  107  1  2   99   41    75 0.634   1.49
 7.02 Intr - 173136 172890  247  0  1   54   80   183 0.399  10.21
 7.01 Init - 189781 189566  216  1  0   69   83    70 0.655   3.34
 7.00 Prom - 190802 190763   40                              -4.55

 8.00 Prom + 193233 193272   40                              -4.95
 8.01 Init + 197036 197105   70  1  1   94   50   113 0.799   9.36
 8.02 Intr + 199444 199535   92  2  2   67   76    25 0.814  -2.01
 8.03 Intr + 204794 204862   69  1  0   96   86    98 0.901   8.86
 8.04 Intr + 208381 208527  147  0  0   36  100   184 0.911  13.91
 8.05 Intr + 211858 212013  156  0  0   47   52   164 0.910   7.99
 8.06 Intr + 213540 213704  165  2  0    9   74   301 0.862  20.04
 8.07 Intr + 213881 213939   59  1  2   68   80   116 0.961   5.56
 8.08 Intr + 216661 216791  131  1  2  -31   59   186 0.547   3.22
 8.09 Intr + 218723 218775   53  0  2   96  103    54 0.981   5.41
 8.10 Intr + 219279 219428  150  2  0   69   94   114 0.990   9.54
 8.11 Intr + 224873 224974  102  1  0   84   19    96 0.671   1.75
 8.12 Intr + 228416 228605  190  1  1   -6  108   129 0.067   3.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  80062  80128   67  0  1   77   72   105 0.929   9.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:48246215_48475440|GENSCAN_predicted_peptide_1|153_aa
MTQTSETGIKVDQDKDNRDKERAHGKQMAVIQHRMAPGDSTVPKLSSAEAQTKSTVDNRW
SYGLTATVYLGDHCCKSRPALYPYMCALYCHKLRILLHVLLGKQQKALDEKFCYICPPTC
IYTLPFHSGPVMEKAAVMIYEIPSGSLFHCLDK

>gi568815596f:48246215_48475440|GENSCAN_predicted_CDS_1|462_bp
atgacccagacttctgaaactggaatcaaagtggatcaggataaagacaacagagacaaa
gaaagggcacatggaaagcagatggctgtcattcagcacagaatggctccaggtgacagt
actgttcccaagttgagctctgcggaagctcaaaccaagtcgactgtggacaatcgatgg
agttatggtctcactgccacagtctacctgggagaccattgctgcaagtctcgtcctgcc
ctttatccttatatgtgtgccctgtattgccacaagctgaggatcttgcttcatgtctta
ttaggaaagcagcaaaaagccttagatgagaaattctgctacatctgcccacccacctgc
atttacaccttgccttttcattctgggcctgtgatggaaaaggcagcagtgatgatctat
gaaataccttctgggtcacttttccattgtctcgataaatag

>gi568815596f:48246215_48475440|GENSCAN_predicted_peptide_2|349_aa
MAEHRSCSLQLPAVASGKTRQPAGSSSCSGGPGSTTSPSRSLPPPPSPSPLPWQRGAKAI
SPTPPSSPASRDPEEGGSAGPSRFPPTSYRREGPGFRLAAWHGGWGGGEMQGPEGRGSHG
KQGGGAVGRLPQGSTALGACARAEETFLDTPRYVGFRKTFRHCLGFESALGTRAADLPAQ
CSSSAKGQSASSSGSLTPMPPDWETLPSRGGQAPHTREFQLASGHQHQRSKVDKSTKMRK
NQHKNAEDSKNQNGFSPPNDRSYSPAKAQNWTENEFDELTEGGLRRWVITNSSELKERVL
TQCKEAKNLDKRLQELLTRITSLEKNINDLMELRNTARELREAYTSINS

>gi568815596f:48246215_48475440|GENSCAN_predicted_CDS_2|1050_bp
atggcagagcaccgcagctgttccctgcagcttccagcagtcgcctccgggaagacgcgg
caaccagcaggcagcagcagctgcagtggcggccccggcagcaccacatccccctcccgc
tcgcttcctccccctccctccccttccccgctgccatggcaacgcggcgccaaggcgatt
agccccacccctccctccagtcccgcctcccgcgaccccgaggaagggggctcggccggc
ccctcccggttcccgcccacctcctaccgaagggaggggcctgggttccggctggctgcc
tggcacggcggctggggtgggggtgaaatgcagggtccggaagggcggggctcacacgga
aagcagggtggaggcgctgtaggccggctgccgcagggcagtacggccctcggtgcctgt
gcccgggctgaggagaccttcctcgacaccccacgttatgtgggtttccgcaagaccttc
cgccattgcctgggctttgaaagcgctttaggaacgagagcagcagatctcccagcacag
tgctcgagctctgctaagggacagtctgcctcctcaagtgggtccttgacccccatgcct
cctgactgggagacacttcccagcaggggtggacaggcacctcatacaagagagttccag
ctggcctcaggtcatcagcatcaaagatcaaaggtagataaatccacgaagatgaggaaa
aaccagcacaaaaatgctgaagattccaaaaaccagaatggcttttctcctccaaatgat
cgcagctactctccagcaaaggcacaaaactggacggagaatgagtttgatgaactgaca
gaaggaggcctcagaaggtgggtaataacaaactcctctgagctaaaggagcgtgttcta
acccaatgcaaggaagctaagaaccttgataaaaggttgcaagaactgctaactagaata
accagtttagagaagaatataaatgacctgatggagctgagaaacacagcacgagaactt
cgtgaagcatatacaagtatcaatagctga

>gi568815596f:48246215_48475440|GENSCAN_predicted_peptide_3|457_aa
MGPVIGMTPDKRAETPGAEKIAGLSQIYKMGSLPEAVDAARPKATLVDSESADDELTNLN
WLHESTNLLTNFSLGSEGLPIVSPLYDIEGDDVPSFGPACYQNPEKKSATSKPPYSFSLL
IYMAIEHSPNKCLPVKEIYSWILDHFPYFATAPTGWKNSVRHNLSLNKCFQKVERSHGKV
NGKGSLWCVDPEYKPNLIQALKKQPFSSASSQKLSKLSSISKENKTFQWDKNVEAEDSDI
DLDPVYAQVNSNSGPSSFIHESDIDAAAAMMLLNTSIEQGILECEKPLPLKTALQKKRSY
GNAFHHPSAVRLQESDSLATSIDPKEDHNYSASSMAAQRCASRSSVSSLSSVDEVYEFIP
KNSHVGSDGSEGFHSEEDTDVDYEDDPLGDSGYASQPCAKISEKGQSGKKMRKQTCQEID
EELKEAAGSLLHLAGIRTCLGSLISTAKTQNQKQRKK

>gi568815596f:48246215_48475440|GENSCAN_predicted_CDS_3|1374_bp
atgggtccagtaattggaatgactccagataagagagctgaaaccccaggagctgaaaag
attgcaggattaagccagatttacaaaatgggaagcttgcctgaagctgttgatgctgcc
aggccgaaggccactctagtggacagtgagtcagcagatgatgaactcacaaacttgaac
tggcttcatgaaagcactaatcttctaacaaacttcagcctcggaagtgagggtcttcca
attgttagtccattgtatgacatagagggagatgatgtgccatcctttggaccagcttgc
taccagaacccagaaaaaaaatcagcgacttcaaagcccccatactcctttagtcttctc
atttatatggccattgagcactctccaaataaatgtttgcctgtcaaagaaatttatagc
tggattctggaccattttccatattttgctactgcaccaacaggctggaagaattctgtt
cgacataatctgtccctgaataaatgttttcagaaagtggaaagaagccatggcaaggtt
aatggaaaaggttccttatggtgtgttgatccggaatataaacccaatcttatccaggca
ctgaagaagcaacctttttcttcagcatcttcacaaaaactttctaaattgagtagtatt
agcaaagaaaacaagaccttccagtgggacaaaaatgtagaggcagaagacagtgatatt
gatcttgaccctgtgtatgctcaggttaatagcaattccggtccttcaagcttcattcat
gaatctgatattgatgctgctgctgcaatgatgcttttaaatacttctatagaacaagga
attttagaatgtgagaagcctcttcctcttaaaacagcattgcaaaaaaagaggagttac
ggcaatgcatttcatcatcccagtgctgtacgattacaagagagtgattctttagccacc
agcattgatccaaaagaagatcacaattacagtgcaagtagcatggcagcacagcgttgt
gcatccaggtctagcgtgtcttccctgtcttctgtggatgaggtatatgaatttatccca
aagaatagtcacgtgggaagtgatggcagtgaaggatttcacagtgaagaagatacagac
gttgattatgaagatgatcctcttggagacagtggctatgcatcacagccttgtgcaaaa
atctctgaaaaagggcagtcaggcaaaaagatgcgaaaacagacatgtcaagaaattgat
gaggagctcaaagaggcagctggatctctgctccaccttgctggaattcgtacatgttta
ggttccctaataagtactgcaaagacacaaaatcaaaagcaacggaaaaaatag

>gi568815596f:48246215_48475440|GENSCAN_predicted_peptide_4|88_aa
MGQVWALVRSTLEPFHTDDEEEGEYNEVTEQVCLPAKAKVAKEGEVHPYPSAPPPYFEEK
EWPDPPDLSFPEDTGRKVVAPVTVRAAP

>gi568815596f:48246215_48475440|GENSCAN_predicted_CDS_4|267_bp
atgggacaagtgtgggctctggttcgttccaccttggaaccttttcacactgatgatgag
gaggaaggagagtataacgaagtaacagagcaggtttgtttgccagctaaagctaaagtg
gcaaaggagggagaggttcatccctacccttctgcaccccctccttattttgaagaaaaa
gagtggcctgaccctccagatctttcttttccagaggacactgggcgaaaagtagttgcc
ccagtgactgttcgagcagcaccttga

>gi568815596f:48246215_48475440|GENSCAN_predicted_peptide_5|144_aa
MVKNSKHITGIPYNSQGQATVEQMNLSLKQQLQKQKGGNRDYGTAHIQLNLALLTLKFLS
LPKAQMLSAAEQHLQKPAAKTEAEQLVWWRDPITKSWEIGKIITWDRGYACVSPGPNQQL
IWIPSRCLKPYHELDAEEEIPGGS

>gi568815596f:48246215_48475440|GENSCAN_predicted_CDS_5|435_bp
atggtaaagaatagtaaacacattactggcatcccatataattctcaaggacaagccact
gtagaacaaatgaatctctccctgaaacagcagttgcaaaaacagaaagggggaaacagg
gattacgggacagcccatatacaattgaatctagcattattaactttaaagtttttgagc
ctgcctaaagcccagatgttgtcagcagctgaacaacatctacagaaaccagctgcaaag
acagaagcagaacaacttgtttggtggagagatccaataacaaaaagttgggaaataggt
aaaataataacttgggatagaggttatgcttgtgtttctccaggaccgaatcaacagctg
atttggataccatcaagatgcctgaaaccttatcatgaactagatgctgaagaagagatt
ccaggaggatcctga

>gi568815596f:48246215_48475440|GENSCAN_predicted_peptide_6|267_aa
MCRRLQVSAGGASRQEPGKIKEVQPFDVFTGTARVRVTVPGGNCDGVHIGTTFVSMKFRV
FTLNLEIQCKGVYPEKIIRQGGKRGNVRVVLYEKDSPWHCWLEDEPTQPLEAKKGKETHS
HLEPPRGTQQPHQHLDFNPRLAPSLANQWTLRRLRLQVQTSIFLKLVESGEPHKRTPEEG
VKGQNKRVNVKEIAGNPGLKGEVEASSWRRDSVLHKRFWGQLAKPSARERACKGASVTPP
GTNGGSGQCLPGKMASIPPIPILRDPP

>gi568815596f:48246215_48475440|GENSCAN_predicted_CDS_6|804_bp
atgtgcaggagactgcaagtatctgcaggaggagcctctaggcaggaaccagggaagata
aaggaagtgcagccctttgatgtgtttacaggaactgcaagagtaagagttactgtaccc
ggaggaaactgcgatggtgtacacattggtacaacctttgtgtcaatgaaatttcgagtg
ttcacacttaacctagaaattcaatgtaaaggagtttatcccgagaaaataataaggcaa
ggaggaaagagagggaatgtcagagtggtgttatatgagaaagactcaccgtggcattgc
tggcttgaagatgagccgacgcagcctctagaagccaaaaaaggaaaggaaacacactcc
cacttagagcctccaagaggaacacaacagcctcaccaacaccttgatttcaacccccgc
ctagctccaagtctagcaaaccagtggactcttagaagactgaggctccaagttcagact
agtatcttcctgaaactggtagaatcaggagaaccacacaagaggactcctgaggagggg
gtaaaaggccaaaacaagagggttaatgtaaaggagattgctggaaaccctgggttgaag
ggagaagtggaagcttccagctggaggagagacagcgtcctccataaacgattttggggg
caacttgcaaaaccatctgccagagaaagagcctgcaaaggtgcctctgtcacacctcca
ggaactaatggtggctctggacagtgcctgccaggaaagatggcgtccatcccccccatc
cctatcctcagggacccaccttga

>gi568815596f:48246215_48475440|GENSCAN_predicted_peptide_7|189_aa
MENRACQLSYRRLCKIKLSPGAEKGTKTGTIRVLSERLPHFSVEDVPYHKDWILLSHVAG
GWVDRKLHSSGRTNGVVHVPGTGIGAGDGFEELRHSQLMGEAISKKIIMVQQKHFSSFMY
KEDSTNIEGQKPGPSGDGEEEGRKVLSLGKIYRAEKVTQEIQLSPSSTWHELGPGLFAVQ
VEIPRKQPS

>gi568815596f:48246215_48475440|GENSCAN_predicted_CDS_7|570_bp
atggagaatagagcttgccagctctcatataggaggctgtgcaagattaagttgagccct
ggggcagaaaaggggactaagacgggaaccatccgggtcctgtctgaaaggctacctcac
ttttctgtggaggatgttccataccacaaagattggatacttttgagccatgtggcaggt
ggttgggtagacagaaaactgcatagtagtggaaggaccaatggggtggtgcatgtgcca
ggcactgggataggtgctggagatggctttgaagagctcagacatagccagctgatgggg
gaggccattagtaagaaaatcattatggtgcaacagaagcactttagcagcttcatgtac
aaagaggactccactaacatagagggacaaaagcctggaccttctggggatggagaggag
gaaggcaggaaggtgctaagtttagggaagatatacagagcagagaaagtcacacaagaa
atacagctgtctccatcctccacgtggcatgagctggggccagggctctttgcagttcag
gtggaaatccccaggaaacagccctcatag

>gi568815596f:48246215_48475440|GENSCAN_predicted_peptide_8|462_aa
MTATDTMRASGKKSPFRVKGYRRGAAKLQGLGFCRSEFPCMGAGAGERMPFEADLRAQNQ
VLKKGVVDEQANSAALKEQLKMKDQSLRKLQQEMDSLTFRNLQLAKRVELLQDELALSEP
RGKKNKDVSLKDESYVDITYSFHQKSGESSSQLSQEQKSVFDEDLQKKIEENERLHIQFF
EADEQHKHVEAELRSRLATLETEAAQHQAVVDGLTRKYMETIEKLQNDKAKLEVKSQTLE
KEAKECRLRTEEWLSLDWGDVEDLVEGEGADWSFQGDKGERGSHGEDGDAVDRKKREYSQ
YNALNVPLHNRRHQLKMRDIAGQALAFVQDLVTALLNFHTYTEQRIQIFPVDSAIDTISP
LNQKFSQYLHENASYVRPLEEGMLHLFESITEDTVTVLLIENRLGCSLLKNLPIPSLEEE
CESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIALLALPX

>gi568815596f:48246215_48475440|GENSCAN_predicted_CDS_8|1386_bp
atgactgccactgacacaatgagggccagcgggaagaagagcccgttcagagtgaagggc
tataggagaggggcagctaaactgcaagggttggggttttgtcgtagtgagtttccctgc
atgggagcaggagcaggagaaaggatgccatttgaggcagatcttcgggctcagaatcag
gttctgaaaaaaggtgttgtggatgaacaagcaaattctgcagctttaaaggagcaactg
aaaatgaaggatcagtcattgagaaaactacaacaggaaatggacagtttgacatttcga
aatctgcagcttgccaagagggtagaactacttcaagatgaactagctctaagtgaacca
cgaggcaagaaaaacaaggatgtttctctaaaggatgaaagttatgtggacataacttat
tctttccatcagaaaagtggagaatcttcttctcagttgagtcaagagcagaagagtgtc
tttgatgaagatctgcaaaagaagatagaagagaatgaacggttgcatatacaatttttt
gaagctgatgagcagcacaagcatgtggaagcagagctgaggagtcgactggccactctg
gagacagaagcagcccagcaccaagctgtggttgacggtctcacccggaagtacatggaa
accattgagaagctgcagaacgacaaggctaaactagaagtgaaatctcagactctagaa
aaggaagccaaggaatgtcgacttcgaacggaagaatggcttagcctggattggggagat
gtggaagatcttgtggaaggagagggagcagactggtcctttcaaggagacaagggagaa
agaggcagtcatggggaagatggtgatgcagttgaccgaaagaaaagagaatatagtcag
tacaacgctctgaacgttccactccacaataggagacaccagctgaagatgcgagatatt
gctgggcaggccctggcttttgttcaggatcttgtgacggctcttctaaactttcatacc
tacacagaacagaggattcaaatttttcctgttgattctgccattgacactatatctcca
ttgaatcagaagttctcacaataccttcatgaaaatgcgtcctatgtccgccctcttgag
gaaggaatgcttcatttatttgaaagtatcactgaggatactgtgactgtcttgctaatt
gaaaatcgtttgggatgctcacttcttaaaaatctgcctattcctagtttagaagaagaa
tgtgaatcctctctttgcacatctgcgttaagagccaggaatctagagctgtcccaggac
atgaaaaaaatgacagctgtgtttgagaagctgcagacttacatagctcttcttgccttg
ccaann