GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:51:37

Sequence gi568815577f:33141923_33363497 : 221575 bp : 43.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1965   2146  182  0  2   96    3    99 0.252   1.71
 1.02 Term +   7543   7691  149  2  2   88   43   127 0.545   6.26
 1.03 PlyA +   7793   7798    6                               1.05

 2.00 Prom +  11125  11164   40                              -6.26
 2.01 Init +  16905  16976   72  2  0   68   74    71 0.461   4.77
 2.02 Intr +  17534  17636  103  1  1   -3   99    75 0.268  -0.75
 2.03 Term +  23412  23485   74  1  2  108   54    85 0.794   5.17
 2.04 PlyA +  23781  23786    6                               1.05

 3.04 PlyA -  23915  23910    6                               1.05
 3.03 Term -  49765  49204  562  0  1  -71   32   545 0.675  26.85
 3.02 Intr -  53501  53389  113  2  2   77  109    96 0.947   9.78
 3.01 Init -  55290  55132  159  0  0   62   38   102 0.306   2.42
 3.00 Prom -  86674  86635   40                              -3.56

 4.00 Prom +  87393  87432   40                              -2.86
 4.01 Init + 100001 100055   55  1  1   76  106     3 0.895   2.42
 4.02 Intr + 101751 101792   42  1  0  110   99    22 0.909   3.71
 4.03 Intr + 103029 103152  124  1  1  110   73   -17 0.922  -1.36
 4.04 Intr + 104796 104968  173  0  2   58   79   132 0.980   8.89
 4.05 Intr + 106787 106932  146  0  2   82  115   130 0.996  15.10
 4.06 Intr + 110740 110908  169  0  1   95   91    64 0.995   6.92
 4.07 Intr + 112753 112985  233  2  2   37   55   148 0.923   3.89
 4.08 Intr + 115264 115374  111  0  0   38   93    78 0.641   3.88
 4.09 Term + 120871 121578  708  0  0  116   41   331 0.541  24.71
 4.10 PlyA + 122258 122263    6                               1.05

 5.00 Prom + 123114 123153   40                             -10.35
 5.01 Init + 124544 124592   49  1  1   75   94    67 0.638   5.14
 5.02 Intr + 126472 126595  124  2  1   56   98    35 0.537   0.94
 5.03 Intr + 134680 134831  152  1  2   48   72    78 0.365   2.01
 5.04 Intr + 137830 137996  167  2  2   64  116    99 0.951   9.98
 5.05 Intr + 141172 141319  148  0  1   65  115    56 0.775   5.81
 5.06 Intr + 146182 146339  158  2  2   46   92   119 0.053   7.83
 5.07 Intr + 154262 154385  124  1  1  123   21    99 0.964   6.86
 5.08 Intr + 156769 157012  244  2  1   25   80   169 0.531   6.36
 5.09 Intr + 158022 158044   23  0  2  121   62   -26 0.262  -4.71
 5.10 Intr + 160160 160275  116  0  2   68   72    74 0.629   3.97
 5.11 Term + 166263 166400  138  2  0  132   41    48 0.823   2.46
 5.12 PlyA + 166948 166953    6                               1.05

 6.00 Prom + 169337 169376   40                              -5.86
 6.01 Init + 183134 183209   76  1  1   49   94   190 0.501  14.95
 6.02 Intr + 183300 183526  227  1  2  -12   30   182 0.671   0.10
 6.03 Intr + 192796 193011  216  0  0   61   33   153 0.348   5.80
 6.04 Intr + 196074 196159   86  2  2   24  102    56 0.368  -0.78
 6.05 Intr + 199077 199252  176  0  2   85  116    29 0.761   4.98
 6.06 Intr + 201346 201500  155  2  2   81   74    42 0.417   1.89
 6.07 Term + 213394 213627  234  0  0   54   47   176 0.693   6.42
 6.08 PlyA + 217871 217876    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:33141923_33363497|GENSCAN_predicted_peptide_1|110_aa
XAGLVLADLDLAPLILVSLILLDPLADWICSYHGIGRSTRERARPHKYFPRSLTELGPLI
ARLICTLTASNCHHTAGSPQQLENRSRAARAGSTTVQGAEAQGASGTVTI

>gi568815577f:33141923_33363497|GENSCAN_predicted_CDS_1|333_bp
nnggctggcttggtcttggctgatctggacttggcgcctctgatcctggtgtctctcatc
ctcctggacccactggctgactggatatgttcctatcatggcattggcagaagcacaagg
gagagagcccgaccccacaagtactttccaaggtccttgactgagttgggtccactaata
gcccgcctcatctgcacactaactgcttctaattgtcatcatacggcaggatccccgcaa
caacttgagaacagatcccgagcagcccgtgcaggctccacgacggtccagggagctgag
gctcagggagcatcgggcactgtgacgatttag

>gi568815577f:33141923_33363497|GENSCAN_predicted_peptide_2|82_aa
MRSSRGGVLLTAPGESSAKNQHNTKHKTTTEYTGLSERTRKPLPGRKNGSGVEELLQAGF
IPELELTFPEGFAFQAFQVIAN

>gi568815577f:33141923_33363497|GENSCAN_predicted_CDS_2|249_bp
atgaggagttcccgtggaggtgtgctgctgacagccccaggtgagagctcagccaagaat
cagcacaacactaagcacaaaacaaccactgaatacactggattaagtgaacgtactaga
aaaccactacctggtaggaagaatggctctggtgtggaggagttactacaagcagggttc
atcccagaactggagctcacattcccagaaggctttgcttttcaggcttttcaggttatc
gccaattga

>gi568815577f:33141923_33363497|GENSCAN_predicted_peptide_3|277_aa
MSIRIDLNPAADSQVCDRIPEDCGGRVSVDQGKSLLPEKHLHGQLSYGYYDLKDSLCYIG
ITWERGRATESWAPPWTYLIVILFIGVPFASNQPTNEPANQPSNQPTKQSTNQPTNQPTN
QPTNQRTNEPSKQQSKQATNQPTKQPTNQPTKQPNNQPTNQPSNQATNQATNQPTNQATN
QATNQASNEASNQATNEASNQATNEASNQASKQPTNQATNQPTSQASKQASKQASKQATN
QPTKQPSKQPSNQPTKQPSNQPSNQRTNQPSNQSTNK

>gi568815577f:33141923_33363497|GENSCAN_predicted_CDS_3|834_bp
atgtccatacgcattgatcttaacccagcggcagactcacaagtgtgtgaccgcatccca
gaggactgcgggggaagggtttctgtggatcagggcaaatcgctcctgccggagaagcac
cttcacggtcagctctcttatggttattatgacctgaaggactctctttgctacatcggc
atcacctgggaacgtggtagggctacagaatcttgggccccaccttggacctacctaatc
gtcatcttattcattggtgttcccttcgccagcaaccaaccaaccaatgaaccagccaac
caaccaagcaaccaaccaaccaagcaatcaacgaaccaaccaaccaaccaaccaaccaac
caaccaaccaaccaacgaaccaacgaaccaagcaagcaacaaagcaagcaagcaaccaac
caaccaaccaagcaaccaaccaaccaaccaaccaagcaaccaaacaaccaaccaaccaac
caaccaagcaaccaagcaaccaatcaagcaaccaaccaaccaaccaaccaagcaaccaac
caagcaaccaaccaagcaagcaacgaagcaagcaaccaagcaaccaatgaagcaagcaac
caagcaaccaatgaagcaagcaaccaagcaagcaagcaaccaaccaaccaagcaaccaac
caaccaaccagccaagcaagcaagcaagcaagcaagcaagcaagcaagcaagcaaccaac
caaccaaccaagcaaccaagcaaacaaccaagcaaccagccaaccaagcaaccaagcaac
caaccaagcaaccaacgaaccaaccaaccaagcaaccagtcaaccaataagtaa

>gi568815577f:33141923_33363497|GENSCAN_predicted_peptide_4|586_aa
MLLSQNAFIFRSLNLVLMVYISLVFGISYDSPDYTDESCTFKISLRNFRSILSWELKNHS
IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLF
SCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKK
HKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKCTLLPPGQESVFNQ
KIFESTYDLEAPPLRIVPPFQIEPVYILHALIDALCLPKMYKTKLHPDQGFSGSPGAVSW
AIGHSYLTQTESLQMRQPPFGQGQFLMCPELVPANGFVVSLTSRMEPQTFLNFHNFLAWP
FPNLPPLEAMDMVEVIYINRKKKVWDYNYDDESDSDTEAAPRTSGGGYTMHGLTVRPLGQ
ASATSTESQLIDPESEEEPDLPEVDVELPTMPKDSPQQLELLSGPCERRKSPLQDPFPEE
DYSSTEGSGGRITFNVDLNSVFLRVLDDEDSDDLEAPLMLSSHLEEMVDPEDPDNVQSNH
LLASGEGTQPTFPSPSSEGLWSEDAPSDQSDTSESDVDLGDGYIMR

>gi568815577f:33141923_33363497|GENSCAN_predicted_CDS_4|1761_bp
atgcttttgagccagaatgccttcatcttcagatcacttaatttggttctcatggtgtat
atcagcctcgtgtttggtatttcatatgattcgcctgattacacagatgaatcttgcact
ttcaagatatcattgcgaaatttccggtccatcttatcatgggaattaaaaaaccactcc
attgtaccaactcactatacattgctgtatacaatcatgagtaaaccagaagatttgaag
gtggttaagaactgtgcaaataccacaagatcattttgtgacctcacagatgagtggaga
agcacacacgaggcctatgtcaccgtcctagaaggattcagcgggaacacaacgttgttc
agttgctcacacaatttctggctggccatagacatgtcttttgaaccaccagagtttgag
attgttggttttaccaaccacattaatgtgatggtgaaatttccatctattgttgaggaa
gaattacagtttgatttatctctcgtcattgaagaacagtcagagggaattgttaagaag
cataaacccgaaataaaaggaaacatgagtggaaatttcacctatatcattgacaagtta
attccaaacacgaactactgtgtatctgtttatttagagcacagtgatgagcaagcagta
ataaagtctcccttaaaatgcaccctccttccacctggccaggaatcagtttttaatcag
aaaatctttgaatctacctatgacctggaagcccccccacttcgaattgtcccacctttc
cagattgaaccagtgtacatcttacatgcattgattgatgccttatgtctccctaaaatg
tataaaaccaagctgcaccctgaccaagggttctcgggatctcctggggctgtgtcatgg
gccattggtcactcatatttgactcagactgaatctcttcaaatgaggcagccccctttt
gggcaagggcagttccttatgtgtccggagttggttcctgccaatgggttcgtggtctcg
ctgacttcaagaatggagccgcagaccttcctgaattttcataactttttagcctggcca
tttcctaacctgccaccgttggaagccatggatatggtggaggtcatttacatcaacaga
aagaagaaagtgtgggattataattatgatgatgaaagtgatagcgatactgaggcagcg
cccaggacaagtggcggtggctataccatgcatggactgactgtcaggcctctgggtcag
gcctctgccacctctacagaatcccagttgatagacccggagtccgaggaggagcctgac
ctgcctgaggttgatgtggagctccccacgatgccaaaggacagccctcagcagttggaa
ctcttgagtgggccctgtgagaggagaaagagtccactccaggacccttttcccgaagag
gactacagctccacggaggggtctgggggcagaattaccttcaatgtggacttaaactct
gtgtttttgagagttcttgatgacgaggacagtgacgacttagaagcccctctgatgcta
tcgtctcatctggaagagatggttgacccagaggatcctgataatgtgcaatcaaaccat
ttgctggccagcggggaagggacacagccaacctttcccagcccctcttcagagggcctg
tggtccgaagatgctccatctgatcaaagtgacacttctgagtcagatgttgaccttggg
gatggttatataatgagatga

>gi568815577f:33141923_33363497|GENSCAN_predicted_peptide_5|480_aa
MAWSLGSWLGGCLLVSALGMVPPPENVRMNSVNFKNILQWESPAFAKGNLTFTAQYLRIF
QDKCMNTTLTECDFSSLSKYGDHTLRVRAEFADEHSDWVNITFCPVDDTIIGPPGMQVEV
LADSLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKNGTDEKFQITPQYDFEVLRNLE
PWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHDETVPSWMVAVILMASVFMVCLALLGCF
ALLWCVYKKTKYAFSPRNSLPQHLKEFLGHPHHNTLLFFSFPLSDENDVFDKLSVIAEDS
ESGKQNPEKRSYYPGHSTEKQKNGKYEWLGYKPEKSSCKRRLASWKLAQVNAAAVPIEKG
YLEAKYIQYGGSSSLLFVVMCAGVMVLARKISFLRGSHLHEASCHIGEVTWLGPEDASSS
QQRTGNRGSQSNSNRLSGINFSTSQKHFGPQIPKGTLFFILENTMPTYQNKGQIGAFASK

>gi568815577f:33141923_33363497|GENSCAN_predicted_CDS_5|1443_bp
atggcgtggagccttgggagctggctgggtggctgcctgctggtgtcagcattgggaatg
gtaccacctcccgaaaatgtcagaatgaattctgttaatttcaagaacattctacagtgg
gagtcacctgcttttgccaaagggaacctgactttcacagctcagtacctaaggatattc
caagataaatgcatgaatactaccttgacggaatgtgatttctcaagtctttccaagtat
ggtgaccacaccttgagagtcagggctgaatttgcagatgagcattcagactgggtaaac
atcaccttctgtcctgtggatgacaccattattggaccccctggaatgcaagtagaagta
cttgctgattctttacatatgcgtttcttagcccctaaaattgagaatgaatacgaaact
tggactatgaagaatgtgtataactcatggacttataatgtgcaatactggaaaaacggt
actgatgaaaagtttcaaattactccccagtatgactttgaggtcctcagaaacctggag
ccatggacaacttattgtgttcaagttcgagggtttcttcctgatcggaacaaagctggg
gaatggagtgagcctgtctgtgagcaaacaacccatgacgaaacggtcccctcctggatg
gtggccgtcatcctcatggcctcggtcttcatggtctgcctggcactcctcggctgcttc
gccttgctgtggtgcgtttacaagaagacaaagtacgccttctcccctaggaattctctt
ccacagcacctgaaagagtttttgggccatcctcatcataacacacttctgtttttctcc
tttccattgtcggatgagaatgatgtttttgacaagctaagtgtcattgcagaagactct
gagagcggcaagcagaatcctgaaaaaagaagttattatccagggcacagtacagagaaa
caaaagaatggaaaatatgagtggttaggatacaagcctgaaaaatcaagctgcaagcgt
agattagcaagctggaagcttgcacaggtgaatgcggcagctgtgccaatagaaaaggga
tacctggaagccaagtacatccaatatggaggttcctcctcccttctctttgtcgtcatg
tgtgcaggtgtcatggtgctggccaggaagatttctttcctgaggggttcacacttgcat
gaagcaagctgccatattggagaagtcacatggctaggacctgaggatgcctcctccagc
caacaacgaacagggaatcgaggttctcaatccaacagcaacaggctctctggcatcaat
ttttccacttctcagaaacactttggcccacaaattcccaaaggaaccttgttcttcatt
ctggaaaacacgatgccaacatatcagaataaaggacagataggagcttttgcttcaaag
tga

>gi568815577f:33141923_33363497|GENSCAN_predicted_peptide_6|389_aa
MMVVLLGATTLVLVAVAPWVLSAAADAQSGKPSVHFAAPKIKPDLGSQINQEKVVFWVLS
CRLPVAVYGSSGAPGSHPREMAVPELCVEFDSFRESTAAPLCQVMRRVIQVCEGQLDVQT
EGTGAISGYPTTQFMTQVVIQGDITSYDAVNTEGKAAEIHYTFPPLQWEMGQGKLFAKYA
SNKSLISKELKQSTTKPKSIKRTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR
AEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTY
SLVIWKNSSGVEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKYS
SQTSQDSGNYSNEDESESKTSEELQQDFV

>gi568815577f:33141923_33363497|GENSCAN_predicted_CDS_6|1170_bp
atgatggtcgtcctcctgggcgcgacgaccctagtgctcgtcgccgtggcgccatgggtg
ttgtccgcagccgcagacgcccagtctgggaaaccttcggtccactttgccgcgccaaag
attaaacccgacctgggctcgcaaatcaaccaggagaaagtggtgttctgggtcctctct
tgccgcttgcctgtggccgtgtacgggtcctcgggagcgcccgggtcccacccccgtgaa
atggcggtgccagagctttgtgtcgagtttgattctttccgggaaagtaccgcggctccg
ctgtgtcaagtgatgcgcagggtgatccaggtgtgtgaggggcagctggatgtccagact
gagggcactggtgccatcagtggctatcctaccactcaattcatgacccaggtggtgatc
cagggtgatatcaccagttatgatgcagttaacacagaggggaaagctgctgagatacac
tatactttcccacccctgcagtgggagatggggcaggggaaactatttgcaaaatatgca
tccaacaagagcttaatatccaaggaactcaaacaatcaacaacaaaacccaaatccatc
aaaagaactgggatggataattggataaaattgtctgggtgtcagaatattactagtacc
aaatgcaacttttcttcactcaagctgaatgtttatgaagaaattaaattgcgtataaga
gcagaaaaagaaaacacttcttcatggtatgaggttgactcatttacaccatttcgcaaa
gctcagattggtcctccagaagtacatttagaagctgaagataaggcaatagtgatacac
atctctcctggaacaaaagatagtgttatgtgggctttggatggtttaagctttacatat
agcttagttatctggaaaaactcttcaggtgtagaatatttctctgaacagccattgaag
aatcttctgctttcaacttctgaggaacaaatcgaaaaatgtttcataattgaaaatata
agcacaattgctacagtagaagaaactaatcaaactgatgaagatcataaaaaatacagt
tcccaaactagccaagattcaggaaattattctaatgaagatgaaagcgaaagtaaaaca
agtgaagaactacagcaggactttgtatga