GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:47:58

Sequence gi568815596r:147835513_148075958 : 240446 bp : 35.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1607   1769  163  1  1   73   28   107 0.243   1.83
 1.02 Term +   2359   2576  218  2  2  105   48    99 0.807   3.92
 1.03 PlyA +   2717   2722    6                               1.05

 2.07 PlyA -   2769   2764    6                               1.05
 2.06 Term -   6229   6145   85  0  1  112   37    78 0.336   1.25
 2.05 Intr -   8328   8150  179  0  2   64   57    44 0.285  -3.30
 2.04 Intr -   8957   8817  141  2  0   24   64   141 0.783   4.93
 2.03 Intr -   9283   9061  223  0  1   -2    2   358 0.670  15.41
 2.02 Intr -  32820  32542  279  2  0   85    4   133 0.018   0.27
 2.01 Init -  36885  36842   44  0  2   51  121    34 0.625   2.94
 2.00 Prom -  42827  42788   40                              -1.85

 3.00 Prom +  46492  46531   40                              -4.65
 3.01 Init +  54456  54519   64  2  1   41   67    59 0.600   0.46
 3.02 Intr +  60789  60996  208  1  1  108  110    88 0.956  10.21
 3.03 Intr +  63946  64055  110  1  2  103   94   -34 0.852  -2.29
 3.04 Intr +  64232  64386  155  0  2  104  108   100 0.996  12.47
 3.05 Intr +  79679  79822  144  1  0   69   91    50 0.783   2.96
 3.06 Intr +  81771  81914  144  2  0   88   93   132 0.996  13.26
 3.07 Intr +  82935  83080  146  2  2  110   74    33 0.912   2.26
 3.08 Intr +  84718  84832  115  1  1   52  110    68 0.993   4.93
 3.09 Intr +  87461  87599  139  1  1   95   91    84 0.999   8.52
 3.10 Intr +  90519  90649  131  1  2  120   87    83 0.998  10.89
 3.11 Term +  91568  91762  195  1  0  107   45   103 0.983   4.33
 3.12 PlyA +  92408  92413    6                               1.05

 4.18 PlyA -  93706  93701    6                               1.05
 4.17 Term -  96129  95978  152  1  2   18   49   104 0.082  -3.41
 4.16 Intr -  97059  97038   22  0  1  104   93     0 0.105  -1.70
 4.15 Intr - 100186 100037  150  1  0  114   48   104 0.400   8.44
 4.14 Intr - 102701 102634   68  0  2   56  116    54 0.978   2.71
 4.13 Intr - 102881 102786   96  0  0  103   81    20 0.767   1.86
 4.12 Intr - 103736 103628  109  2  1  116   81    76 0.998   8.64
 4.11 Intr - 108010 107924   87  1  0  102   10    86 0.714   1.45
 4.10 Intr - 112625 112539   87  2  0   94   70    43 0.647   2.35
 4.09 Intr - 117012 116861  152  1  2   86  111    56 0.986   6.66
 4.08 Intr - 119883 119835   49  0  1   87   94    22 0.529   0.03
 4.07 Intr - 122871 122786   86  1  2   56   78   102 0.968   4.62
 4.06 Intr - 123354 123279   76  0  1   35  115    66 0.607   2.17
 4.05 Intr - 124261 124225   37  0  1   94   75    18 0.435  -1.55
 4.04 Intr - 126665 126598   68  2  2   80   51   109 0.474   3.18
 4.03 Intr - 137317 137227   91  0  1   74   53    82 0.006   2.38
 4.02 Intr - 142227 142085  143  0  2   54   20   188 0.072   6.83
 4.01 Init - 142457 142452    6  2  0   92   72     0 0.961  -0.17
 4.00 Prom - 145732 145693   40                              -4.15

 5.00 Prom + 147048 147087   40                              -3.45
 5.01 Init + 148271 148421  151  1  1   54   42   138 0.348   6.05
 5.02 Term + 167984 168285  302  0  2   28   42   158 0.186  -0.40
 5.03 PlyA + 168511 168516    6                               1.05

 6.00 Prom + 169569 169608   40                              -3.75
 6.01 Sngl + 180721 180915  195  0  0   65   44   194 0.865   7.61
 6.02 PlyA + 181249 181254    6                               1.05

 7.06 PlyA - 183015 183010    6                               1.05
 7.05 Term - 184778 184611  168  2  0   60   48    97 0.793  -0.20
 7.04 Intr - 186149 185845  305  0  2    4   60   348 0.080  18.98
 7.03 Intr - 186346 186255   92  0  2  101   32    37 0.051  -1.88
 7.02 Intr - 198319 198188  132  0  0   68   64    77 0.545   2.14
 7.01 Intr - 205840 205681  160  2  1   65  116   115 0.917  10.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 127415 127308  108  2  0   73   63   107 0.822   4.97
S.002 Term - 142227 142081  147  0  0   54   42   193 0.898   8.22


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:147835513_148075958|GENSCAN_predicted_peptide_1|126_aa
LTCLNICQEAMDPPTDVSSLIQRSPTFLTPGTGFVENNFSMGVLDNFRMKLFDSGENLAL
HVREKKSPQLGLPLCSNVRFCKLICFCKLICFCLPFLPQKEEEEEEEEEEENNHSLLKGQ
PNSLMF

>gi568815596r:147835513_148075958|GENSCAN_predicted_CDS_1|381_bp
ctcacttgcttaaatatctgccaagaagcaatggatcctcctactgatgtcagttctcta
atccagcggtccccaacctttttgacaccagggaccggttttgtggaaaacaatttttcc
atgggggtattggataatttcaggatgaaactgtttgactcaggtgaaaaccttgcttta
catgtcagagaaaagaagagccctcagctgggattgccattatgctccaatgttcggttc
tgtaaactcatctgcttctgcaaactcatctgcttctgcttgcccttcctgcctcaaaag
gaggaggaggaggaagaagaggaagaggaagagaacaaccactctcttctcaaaggccaa
cctaactctctcatgttctga

>gi568815596r:147835513_148075958|GENSCAN_predicted_peptide_2|316_aa
MSVEKYSENMKHNIREFSALSINIIILTASKLLRMLATLYRILFPIKGNLVTSYHSSKVQ
TNATTSLYYSSHFSERELGADSTSIEPLTENTEMNEKNLLSSNVKREKLRRRRGGGGSGV
RCRPDSLGTDWVRCPDRPSTQTPKVRGPLAAELAAVAARRLRRGEGAAGGSGGGGAGGGQ
VLLEARRSGGTLGGSGGGGGGGSGGRAQRACRAGSARRLSGKRGGSGGGLLHTRAVLVTR
KEKEKTHGGRAVHPLRIFTPFITMRNLNPFPPFLLHTKHCVENCFARNRKMTENLWSMED
VKFPLNEGLRSFRAAF

>gi568815596r:147835513_148075958|GENSCAN_predicted_CDS_2|951_bp
atgtctgttgaaaagtattctgaaaatatgaagcacaacataagggagttttcagcatta
tctataaatattatcatcttgactgcctcaaagctcttgcgtatgctagccactctgtac
agaatcctcttccccatcaaagggaacttggtgacatcctatcattcttccaaggtccag
acaaatgccactacctccttgtattactcttcacatttcagtgaacgtgaactgggcgcc
gattccaccagcattgagccactcacggagaatacagagatgaatgagaaaaacttgtta
agttctaacgtgaagagagagaagctgaggcgacgaagaggcggcggcggcagcggcgtc
cgctgccgcccggacagtctgggaactgactgggtccgatgtccggaccgaccttcaacc
cagacacctaaagtccgaggaccactggcggccgagctcgcggcggtggcggcgaggcgg
ctgcggcgcggggaaggggcggcgggcggcagcggcggcggcggtgcaggcggcggccaa
gttctgctggaagccaggcgcagcggaggaacgctcggcggcagcggcggcggcggcggc
ggcggcagcggcggccgggcgcagcgcgcgtgccgggccgggagcgcgaggagattgtcg
gggaagcgaggcgggagcgggggagggcttctgcacacgcgtgctgtcttggtgactaga
aaagaaaaagaaaaaactcacggaggaagggctgtccacccgctcaggatattcacgcca
tttatcacgatgcgcaacttgaatccattcccgccgttccttttacacacaaagcattgt
gttgaaaactgttttgcacgtaataggaagatgactgaaaacctttggagtatggaggat
gttaagttccccttaaatgaaggacttagaagctttcgtgctgctttctag

>gi568815596r:147835513_148075958|GENSCAN_predicted_peptide_3|516_aa
MVLEKNLEIESICLILQMRKQGAILGRSETQECLFFNANWEKDRTNQTGVEPCYGDKDKR
RHCFATWKNISGSIEIVKQGCWLDDINCYDRTDCVEKKDSPEVYFCCCEGNMCNEKFSYF
PEMEVTQPTSNPVTPKPPYYNILLYSLVPLMLIAGIVICAFWVYRHHKMAYPPVLVPTQD
PGPPPPSPLLGLKPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYS
LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMA
RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH
GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE
EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE
RITQMQRLTNIITTEDIVTVVTMVTNVDFPPKESSL

>gi568815596r:147835513_148075958|GENSCAN_predicted_CDS_3|1551_bp
atggttctggaaaagaatttggaaattgaatcaatctgcttgattttacagatgcggaaa
caaggtgctatacttggtagatcagaaactcaggagtgtcttttctttaatgctaattgg
gaaaaagacagaaccaatcaaactggtgttgaaccgtgttatggtgacaaagataaacgg
cggcattgttttgctacctggaagaatatttctggttccattgaaatagtgaaacaaggt
tgttggctggatgatatcaactgctatgacaggactgattgtgtagaaaaaaaagacagc
cctgaagtatatttttgttgctgtgagggcaatatgtgtaatgaaaagttttcttatttt
ccggagatggaagtcacacagcccacttcaaatccagttacacctaagccaccctattac
aacatcctgctctattccttggtgccacttatgttaattgcggggattgtcatttgtgca
ttttgggtgtacaggcatcacaagatggcctaccctcctgtacttgttccaactcaagac
ccaggaccacccccaccttctccattactaggtttgaaaccactgcagttattagaagtg
aaagcaaggggaagatttggttgtgtctggaaagcccagttgcttaacgaatatgtggct
gtcaaaatatttccaatacaggacaaacagtcatggcaaaatgaatacgaagtctacagt
ttgcctggaatgaagcatgagaacatattacagttcattggtgcagaaaaacgaggcacc
agtgttgatgtggatctttggctgatcacagcatttcatgaaaagggttcactatcagac
tttcttaaggctaatgtggtctcttggaatgaactgtgtcatattgcagaaaccatggct
agaggattggcatatttacatgaggatatacctggcctaaaagatggccacaaacctgcc
atatctcacagggacatcaaaagtaaaaatgtgctgttgaaaaacaacctgacagcttgc
attgctgactttgggttggccttaaaatttgaggctggcaagtctgcaggcgatacccat
ggacaggttggtacccggaggtacatggctccagaggtattagagggtgctataaacttc
caaagggatgcatttttgaggatagatatgtatgccatgggattagtcctatgggaactg
gcttctcgctgtactgctgcagatggacctgtagatgaatacatgttgccatttgaggag
gaaattggccagcatccatctcttgaagacatgcaggaagttgttgtgcataaaaaaaag
aggcctgttttaagagattattggcagaaacatgctggaatggcaatgctctgtgaaacc
attgaagaatgttgggatcacgacgcagaagccaggttatcagctggatgtgtaggtgaa
agaattacccagatgcagagactaacaaatattattaccacagaggacattgtaacagtg
gtcacaatggtgacaaatgttgactttcctcccaaagaatctagtctatga

>gi568815596r:147835513_148075958|GENSCAN_predicted_peptide_4|492_aa
MQTEVLEKVQSAKGPDRVHILLQPLVTRSYREDRALSKSEAWTTVGESVTHLSELLKRTA
LHGESNSVLIIGPRGSGKTMNGKSLLTTGRFDRGAGDVAAEARGPGIPYALKTMQLINHA
LKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLL
EALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLYVKI
FKEQLSLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNR
VTASHPFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMV
YNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNT
QIMNALQKYPNCPTDLSRCKPHSLHPRDEAHLIMVDKLFDVLLDSFCQYFIQLEWQSLKS
QETTGAGEDVEK

>gi568815596r:147835513_148075958|GENSCAN_predicted_CDS_4|1479_bp
atgcagaccgaggtcctagaaaaagtccagtccgccaagggaccagatagggttcatatc
ctgctacagcccctggtaacaaggtcctatcgggaggacagggccctttccaagtctgaa
gcctggaccacagttggggaatctgtcacacacttaagtgagctgctgaaaagaactgct
ctccatggagagagtaactctgtccttattatcggaccccgaggatcaggaaaaactatg
aacgggaagtccctcctgactacgggaagatttgatcggggtgcaggagatgtagctgca
gaggccagaggacctggaattccctatgctttaaaaaccatgcagttaataaatcatgct
ttgaaagaactcatggaaatagaagaagtgagtgaaaatgtattacaagttcacttaaat
ggactgctgcagatcaatgacaaaatcgccctaaaggaaatcacaaggcagttaaatctg
gaaaatgtagttggagataaagtttttggaagctttgctgaaaacctttcatttcttctg
gaagctttaaaaaaaggtgaccgaactagcagttgcccagtgatcttcatattagatgaa
tttgatctttttgctcatcataaaaaccaaacacttctctataatctttttgacatttct
cagtctgcacagaccccaatagcagttattggtcttacatgtagattgtatgttaaaata
tttaaagaacagttatctctacctgcagagtttccagacaaggtttttgctgagaagtgg
aatgaaaatgttcagtatctctcagaagatagaagtgtgcaagaagtactacagaagcat
ttcaatatcagcaaaaacctgcggtcattacacatgctattgatgcttgctttaaatcga
gtaacagcatcgcacccatttatgactgccgtagatctaatggaagcaagccaactgtgt
agcatggactcgaaagcaaatattgtacatggtctatcagtcttggaaatctgtcttata
atagcaatgaaacatttaaatgacatctatgaggaagagccatttaattttcaaatggtc
tataatgagtttcagaagtttgttcaaaggaaagcacattccgtttataattttgaaaaa
cctgttgtcatgaaggcttttgaacacttgcagcaattagaattaataaagcccatggaa
agaacttcaggaaattcacagagagagtaccagctgatgaaactgcttttggataatact
caaattatgaatgctctgcagaaatatcccaactgtcctacagatttgtcaaggtgtaag
cctcactccttgcatcccagggatgaagcccacttgatcatggtggataagctttttgat
gtgctgctggattcgttttgccagtattttatccagttagaatggcaatcattaaaaagt
caggaaacaacaggtgctggagaggatgtggagaaatag

>gi568815596r:147835513_148075958|GENSCAN_predicted_peptide_5|150_aa
MKEIVDTAKRVGSDVFQHMGLREIQELTDTTPEELTEDKVEIDASEPLPDKPMRKTTIIS
IDVENAFDKIQHPFMLKTLNKLRIDRTYLKIIRAIYDKPTANITLNGQKQEAFPLKTGTR
KGCPLSPLLFNIVLEVLARAIRQEKEIKGI

>gi568815596r:147835513_148075958|GENSCAN_predicted_CDS_5|453_bp
atgaaagagattgtagacacggcaaaaagggtggggagtgatgtgtttcaacatatgggt
cttagagaaattcaagagctaacagataccacaccagaggaattaacagaagacaaggtg
gagatagatgcttctgaaccactgccagacaaaccaatgagaaaaaccacgattatctca
atagatgtagaaaacgccttcgacaaaattcaacaccccttcatgctaaaaactctcaat
aaactaagaatcgatagaacgtatctcaaaataataagagctatttatgacaaacccacg
gccaatatcacactgaatgggcaaaaacaggaagcattccctttgaaaaccggcacaaga
aaaggatgccctctctcaccactcctattcaacatagtattggaagttctggccagggca
atcaggcaagagaaagaaataaaaggtatttga

>gi568815596r:147835513_148075958|GENSCAN_predicted_peptide_6|64_aa
MTSSVAGPRRSSKALPKAKLAPKKAMVTVCWSAAGLIHYSFLNPGETITSEKYAQQINEM
HLKL

>gi568815596r:147835513_148075958|GENSCAN_predicted_CDS_6|195_bp
atgaccagctcagtggctggaccgcgaagaagctccaaagcacttcccaaagccaaactt
gcaccaaaaaaggccatggtaactgtttgctggtctgctgccggtctgatccactacagc
tttctgaatcctggagaaaccattacatctgagaagtatgctcagcaaatcaatgagatg
cacttaaaactgtga

>gi568815596r:147835513_148075958|GENSCAN_predicted_peptide_7|285_aa
XSVIEAEDPEVTFTEIPHHTLLLLPKQVIESRFCSVVSPPTPAELVFNDPSRARCQSAVK
AWSAVPENARKLSSRSPDEVPSSIFNFKHWQNSSTVMWMGTPPHTPLPTPTPPSPPPAPP
PPHPGAPLLPSLELWRMTQRVIKGGSGGGGGEGGGGELGKWLLLGVVRCLQPGPSSSSSS
SSSSSSSSNSSSSSNSSSKGSVLLRGFWFLSLLLSRPKRRRVEGGRRVGGDGGLLSRDRD
KSSVCILTRCITRVAHIGYCALHALPLNPPWYSGVALGKEQAGKS

>gi568815596r:147835513_148075958|GENSCAN_predicted_CDS_7|858_bp
ntttcagtaattgaagctgaggatccagaagtcaccttcacagaaattcctcatcacacc
ctcctgttactcccaaaacaagtcatagagtccagattctgtagtgtcgtcagccctcca
actcccgctgaactggtgtttaacgatccttcaagagcaagatgccaatctgctgtaaaa
gcatggtctgctgtacctgagaatgcgagaaaattaagttcaagatcacctgatgaagta
ccttcatcaattttcaacttcaagcattggcagaattcatcaactgttatgtggatgggc
accccacctcacacacccctccctactccaacccctccttcaccccccccagcaccaccc
cctcctcaccccggagctccactgctgccttccctggagctgtggaggatgacacaaagg
gtaataaagggggggagtggaggaggaggaggcgaaggaggaggaggagagctggggaag
tggctgctcctgggtgtagtgagatgtctccagccagggccaagcagcagcagtagcagc
agcagcagtagcagcagcagcagcaacagcagcagcagcagcaacagcagcagcaaaggg
tctgtgttgctaagaggcttttggtttctttctctcctcctctcacggccaaagaggagg
agggtggagggagggaggcgagttggaggggacggaggacttctatctagggacagagac
aagtcctctgtatgcattttgaccagatgcatcacacgcgttgctcatattggatattgc
gcccttcatgccttacctctcaaccctccctggtattctggagtggctttggggaaggag
caggcagggaagtcttga