Result of FASTA (ccds) for pF1KE0755
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0755, 329 aa
  1>>>pF1KE0755 329 - 329 aa - 329 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2831+/-0.000692; mu= 16.9533+/- 0.042
 mean_var=74.6678+/-14.768, 0's: 0 Z-trim(111.0): 11  B-trim: 38 in 1/51
 Lambda= 0.148425
 statistics sampled from 12042 (12051) to 12042 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.733), E-opt: 0.2 (0.37), width:  16
 Scan time:  2.890

The best scores are:                                      opt bits E(32554)
CCDS47350.1 DOK3 gene_id:79930|Hs108|chr5          ( 330) 2241 488.7 2.8e-138
CCDS78098.1 DOK3 gene_id:79930|Hs108|chr5          ( 440) 1487 327.3 1.4e-89
CCDS4426.1 DOK3 gene_id:79930|Hs108|chr5           ( 496) 1487 327.3 1.5e-89
CCDS47349.1 DOK3 gene_id:79930|Hs108|chr5          ( 228) 1364 300.8 7.1e-82
CCDS1954.1 DOK1 gene_id:1796|Hs108|chr2            ( 481)  504 116.8 3.5e-26
CCDS6016.1 DOK2 gene_id:9046|Hs108|chr8            ( 412)  485 112.7 5.1e-25
CCDS82474.1 DOK1 gene_id:1796|Hs108|chr2           ( 177)  358 85.3 4.1e-17


>>CCDS47350.1 DOK3 gene_id:79930|Hs108|chr5               (330 aa)
 initn: 1957 init1: 1957 opt: 2241  Z-score: 2596.1  bits: 488.7 E(32554): 2.8e-138
Smith-Waterman score: 2241; 99.4% identity (99.4% similar) in 330 aa overlap (1-329:1-330)

               10        20        30        40        50        60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
              190       200       210       220       230       240

              250       260       270       280        290         
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSL-CSCSWRHPRSQ
       :::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
CCDS47 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLLCSCSWRHPRSQ
              250       260       270       280       290       300

     300       310       320         
pF1KE0 PCTQASCLQGSDCPAPHRNSTSAAHTLGTS
       : ::::::::::::::::::::::::::::
CCDS47 PRTQASCLQGSDCPAPHRNSTSAAHTLGTS
              310       320       330

>>CCDS78098.1 DOK3 gene_id:79930|Hs108|chr5               (440 aa)
 initn: 1534 init1: 1487 opt: 1487  Z-score: 1721.8  bits: 327.3 E(32554): 1.4e-89
Smith-Waterman score: 1487; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)

               10        20        30        40        50        60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
       :::::::::::::::::::::::::::::::::::                         
CCDS78 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLFAFSTPCA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLCSCSWRHPRSQP
                                                                   
CCDS78 PDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEPPTSRKMH
              250       260       270       280       290       300

>>CCDS4426.1 DOK3 gene_id:79930|Hs108|chr5                (496 aa)
 initn: 1534 init1: 1487 opt: 1487  Z-score: 1721.0  bits: 327.3 E(32554): 1.5e-89
Smith-Waterman score: 1487; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:57-271)

                                             10        20        30
pF1KE0                               MDPLETPIKDGILYQQHVKFGKKCWRKVWA
                                     ::::::::::::::::::::::::::::::
CCDS44 GQKGKCEEFPSSLSSVSPGLEAAALLLAVTMDPLETPIKDGILYQQHVKFGKKCWRKVWA
         30        40        50        60        70        80      

               40        50        60        70        80        90
pF1KE0 LLYAGGPSGVARLESWEVRDGGLGAAGDRSAGPGRRGERRVIRLADCVSVLPADGESCPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LLYAGGPSGVARLESWEVRDGGLGAAGDRSAGPGRRGERRVIRLADCVSVLPADGESCPR
         90       100       110       120       130       140      

              100       110       120       130       140       150
pF1KE0 DTGAFLLTTTERSHLLAAQHRQAWMGPICQLAFPGTGEASSGSTDAQSPKRGLVPMEENS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DTGAFLLTTTERSHLLAAQHRQAWMGPICQLAFPGTGEASSGSTDAQSPKRGLVPMEENS
        150       160       170       180       190       200      

              160       170       180       190       200       210
pF1KE0 IYSSWQEVGEFPVVVQRTEAATRCQLKGPALLVLGPDAIQLREAKGTQALYSWPYHFLRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IYSSWQEVGEFPVVVQRTEAATRCQLKGPALLVLGPDAIQLREAKGTQALYSWPYHFLRK
        210       220       230       240       250       260      

              220       230       240       250       260       270
pF1KE0 FGSDKILLGTPGVSLLICKGERTDDVSGIILDESLLRAYSVPGAGGHSRVQDSLGPVLRE
       :::::                                                       
CCDS44 FGSDKGVFSFEAGRRCHSGEGLFAFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLP
        270       280       290       300       310       320      

>>CCDS47349.1 DOK3 gene_id:79930|Hs108|chr5               (228 aa)
 initn: 1219 init1: 1080 opt: 1364  Z-score: 1583.4  bits: 300.8 E(32554): 7.1e-82
Smith-Waterman score: 1364; 99.0% identity (99.0% similar) in 206 aa overlap (125-329:23-228)

          100       110       120       130       140       150    
pF1KE0 FLLTTTERSHLLAAQHRQAWMGPICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSS
                                     ::::::::::::::::::::::::::::::
CCDS47         MDPLETPIKDGILYQQHVKFGKGTGEASSGSTDAQSPKRGLVPMEENSIYSS
                       10        20        30        40        50  

          160       170       180       190       200       210    
pF1KE0 WQEVGEFPVVVQRTEAATRCQLKGPALLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 WQEVGEFPVVVQRTEAATRCQLKGPALLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSD
             60        70        80        90       100       110  

          220       230       240       250       260       270    
pF1KE0 KILLGTPGVSLLICKGERTDDVSGIILDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KILLGTPGVSLLICKGERTDDVSGIILDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQ
            120       130       140       150       160       170  

          280        290       300       310       320         
pF1KE0 GERSFLKTSMLRSL-CSCSWRHPRSQPCTQASCLQGSDCPAPHRNSTSAAHTLGTS
       :::::::::::::: :::::::::::: ::::::::::::::::::::::::::::
CCDS47 GERSFLKTSMLRSLLCSCSWRHPRSQPRTQASCLQGSDCPAPHRNSTSAAHTLGTS
            180       190       200       210       220        

>>CCDS1954.1 DOK1 gene_id:1796|Hs108|chr2                 (481 aa)
 initn: 410 init1: 147 opt: 504  Z-score: 583.6  bits: 116.8 E(32554): 3.5e-26
Smith-Waterman score: 504; 35.9% identity (61.3% similar) in 287 aa overlap (4-276:1-273)

               10        20        30        40        50        60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
          ..  . .: :. :  .:: : :::.::.:: ..: :::::: .. .  : ...: : 
CCDS19    MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHK--GSSSGGGR-
                  10        20        30        40          50     

               70        80        90        100         110       
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTG-AFLLTTTERSHLLAAQ--HRQAWMGP
        : .:: . .:::::.:::: :.  :. :.  . :: : :..:::::::.     ::.  
CCDS19 -GSSRRLDCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQT
            60        70        80        90       100       110   

       120       130       140       150       160       170       
pF1KE0 ICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLK
       .:. :::  :  . . :: . :: . . : :::.::   : ..: :.::::::: :: :.
CCDS19 LCRNAFP-KGSWTLAPTD-NPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLH
           120        130        140       150       160       170 

       180       190           200       210             220       
pF1KE0 GPALLVLGPDAIQL----REAKGTQALYSWPYHFLRKFGSDKILLG------TP-GVSLL
       :  .: .  . . :     ...  . : :::: .::..: ::....       : : . .
CCDS19 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTF
             180       190       200       210       220       230 

        230       240       250       260       270       280      
pF1KE0 ICKGERTDDVSGIILDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLR
         .  . .:.   .  :. ..  .. : .:...       :::  . .::          
CCDS19 TFQTAQGNDIFQAV--ETAIHRQKAQGKAGQGH------DVLRADSHEGEVAEGKLPSPP
             240         250       260             270       280   

        290       300       310       320                          
pF1KE0 SLCSCSWRHPRSQPCTQASCLQGSDCPAPHRNSTSAAHTLGTS                 
                                                                   
CCDS19 GPQELLDSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEH
           290       300       310       320       330       340   

>>CCDS6016.1 DOK2 gene_id:9046|Hs108|chr8                 (412 aa)
 initn: 422 init1: 102 opt: 485  Z-score: 562.6  bits: 112.7 E(32554): 5.1e-25
Smith-Waterman score: 485; 46.3% identity (61.9% similar) in 218 aa overlap (8-216:6-207)

               10         20        30        40        50         
pF1KE0 MDPLETPIKDGILY-QQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDR
              .:.:.:: ::.  :::: ::.  : ::.:.  ..::::  :      :    :
CCDS60   MGDGAVKQGFLYLQQQQTFGKK-WRRFGASLYGGSDCALARLELQE------GPEKPR
                 10        20         30        40              50 

      60        70        80         90       100         110      
pF1KE0 SAGPGRRGERRVIRLADCVSVLPADGE-SCPRDTGAFLLTTTERSHLLAAQ--HRQAWMG
             .. :.::::.::. :  : :: : ::::.::.: : :: .::::   .:  :. 
CCDS60 RC----EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQ
                  60        70        80        90       100       

        120       130       140       150          160       170   
pF1KE0 PICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVG---EFPVVVQRTEAATR
        :: :::::  .  ::    ::  :    :::: .:::   ::   :: :... :::. :
CCDS60 AICLLAFPGQRKELSGPEGKQS--RPC--MEENELYSSAVTVGPHKEFAVTMRPTEASER
       110       120         130         140       150       160   

           180       190         200       210       220       230 
pF1KE0 CQLKGPALLVLGPDAIQLR--EAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGE
       :.:.:   :  : .:..:      ::: ::.:::.:::.:: ::.               
CCDS60 CHLRGSYTLRAGESALELWGGPEPGTQ-LYDWPYRFLRRFGRDKVTFSFEAGRRCVSGEG
           170       180       190        200       210       220  

             240       250       260       270       280       290 
pF1KE0 RTDDVSGIILDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLCSC
                                                                   
CCDS60 NFEFETRQGNEIFLALEEAISAQKNAAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPS
            230       240       250       260       270       280  

>>CCDS82474.1 DOK1 gene_id:1796|Hs108|chr2                (177 aa)
 initn: 258 init1: 147 opt: 358  Z-score: 420.8  bits: 85.3 E(32554): 4.1e-17
Smith-Waterman score: 358; 42.7% identity (66.9% similar) in 157 aa overlap (4-156:1-151)

               10        20        30        40        50        60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
          ..  . .: :. :  .:: : :::.::.:: ..: :::::: .. .  : ...: : 
CCDS82    MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHK--GSSSGGGR-
                  10        20        30        40          50     

               70        80        90        100         110       
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTG-AFLLTTTERSHLLAAQ--HRQAWMGP
        : .:: . .:::::.:::: :.  :. :.  . :: : :..:::::::.     ::.  
CCDS82 -GSSRRLDCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQT
            60        70        80        90       100       110   

       120       130       140       150        160       170      
pF1KE0 ICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYS-SWQEVGEFPVVVQRTEAATRCQL
       .:. :::  :  . . :: . :: . . : :::.:: .:.                    
CCDS82 LCRNAFP-KGSWTLAPTD-NPPKLSALEMLENSLYSPTWEGHVLFRGRPPLPLRPWNLHL
           120        130        140       150       160       170 

        180       190       200       210       220       230      
pF1KE0 KGPALLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDV
                                                                   
CCDS82 PDGTGK                                                      
                                                                   




329 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 18:35:02 2016 done: Sat Nov  5 18:35:03 2016
 Total Scan time:  2.890 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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