GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:34:03

Sequence gi568815596r:212907363_213248645 : 341283 bp : 35.70% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3641   3700   60  1  0   57   94    74 0.421   6.20
 1.02 Term +   6186   6275   90  2  0   67   55    75 0.390  -1.16
 1.03 PlyA +   6622   6627    6                               1.05

 2.03 PlyA -   6672   6667    6                               1.05
 2.02 Term -   8848   8658  191  2  2   59   49   192 0.978   9.03
 2.01 Init -  14935  14782  154  1  1   83   98    51 0.743   5.79
 2.00 Prom -  18261  18222   40                              -5.65

 3.00 Prom +  23820  23859   40                              -3.95
 3.01 Init +  26790  26797    8  2  2   69   76     0 0.151  -2.53
 3.02 Intr +  29401  29625  225  1  0   77   47   157 0.398   6.68
 3.03 Intr +  33689  33851  163  2  1   41   61   111 0.341   2.76
 3.04 Term +  45429  45554  126  2  0  -27   43   259 0.243   7.20
 3.05 PlyA +  47043  47048    6                               1.05

 4.03 PlyA -  49624  49619    6                               1.05
 4.02 Term -  66910  66819   92  2  2   93   45   101 0.655   3.20
 4.01 Init -  85464  85338  127  0  1   71   72    80 0.651   5.07
 4.00 Prom -  88133  88094   40                              -4.25

 5.07 PlyA -  89565  89560    6                               1.05
 5.06 Term - 100722  99998  725  1  2  102   47   667 0.999  56.65
 5.05 Intr - 106572 106429  144  1  0   13   94   209 0.548  13.33
 5.04 Intr - 114768 114631  138  1  0   66   64   172 0.932  12.11
 5.03 Intr - 142518 142351  168  1  0  107  119    39 0.965   7.90
 5.02 Intr - 149737 149471  267  2  0   70  107   349 0.261  31.58
 5.01 Init - 177495 177450   46  0  1   50   81    59 0.302   2.30
 5.00 Prom - 180628 180589   40                              -3.65

 6.06 PlyA - 181462 181457    6                               1.05
 6.05 Term - 191547 191377  171  0  0   72   54   154 0.952   7.24
 6.04 Intr - 199827 199714  114  0  0   87   88    82 0.847   7.82
 6.03 Intr - 236908 236829   80  2  2   49   86    56 0.007  -0.15
 6.02 Intr - 245033 244953   81  0  0   80   50   126 0.020   6.69
 6.01 Init - 257014 256957   58  1  1   63  100     0 0.201   0.22
 6.00 Prom - 258259 258220   40                              -7.25

 7.00 Prom + 258798 258837   40                              -2.55
 7.01 Init + 261356 261450   95  1  2   58   77   106 0.357   6.40
 7.02 Term + 282371 282488  118  2  1   98   48    74 0.370   1.43
 7.03 PlyA + 282725 282730    6                               1.05

 8.00 Prom + 286288 286327   40                              -6.05
 8.01 Init + 290912 291245  334  1  1   83   37   195 0.497  11.40
 8.02 Term + 298895 299013  119  0  2   80   38   122 0.924   4.12
 8.03 PlyA + 299607 299612    6                               1.05

 9.02 PlyA - 300060 300055    6                               1.05
 9.01 Term - 307278 306991  288  0  0   77   43   294 0.974  18.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:212907363_213248645|GENSCAN_predicted_peptide_1|49_aa
MTYRMTAQLHATERRGCPLKNRYKIHTQKKGNGADTQDWRKTGLQIEKG

>gi568815596r:212907363_213248645|GENSCAN_predicted_CDS_1|150_bp
atgacttatcggatgacagcacaacttcatgccacagaaagaagaggatgccctttaaag
aatcgttataagatccacacccaaaaaaagggcaatggagctgacacgcaggactggaga
aaaacaggactccaaattgagaaggggtga

>gi568815596r:212907363_213248645|GENSCAN_predicted_peptide_2|114_aa
MESLKSKLLTLENKKYNWEIRKQTNKENPKTRVKQYRKQTSDCVNDKDFMEGPIHTSVMM
EGGGSGNLGRVGITIVFSSREAGTQKQRELLGAFAQWKFAEITETALNVPKSWN

>gi568815596r:212907363_213248645|GENSCAN_predicted_CDS_2|345_bp
atggaatctttgaaaagcaagcttctaactttagaaaacaagaaatataattgggaaatt
aggaaacaaacaaacaaagaaaaccccaagacaagagtaaagcaatacaggaaacagacc
tcagactgtgtaaatgacaaagacttcatggaaggacccatccatacatctgttatgatg
gaaggaggtggtagtggaaatctgggaagggttggtatcaccattgtgttcagcagcagg
gaagcaggaacccagaaacagagggagctcctgggagcttttgcccagtggaaatttgca
gaaatcacagaaacagctctgaatgtacccaagtcttggaattag

>gi568815596r:212907363_213248645|GENSCAN_predicted_peptide_3|173_aa
MGRTSVIISGKAGRDREQARGDWQPPEEPGTAVVVLHVWWRKVTTFGKVRNAEQASYLIP
LLEIKMENSFYGLSAFSSQEGNGLPVAVTKRLMANKPSYLHEVLPRSIRLTPAFTVVLLK
FGKQAGISGKSQKQLAKKIGMEHTEKGEKNQKHVSLNDDNDDDDDDDDDDDDD

>gi568815596r:212907363_213248645|GENSCAN_predicted_CDS_3|522_bp
atgggaagaacgtcagtcatcatcagcgggaaggcaggcagggacagggagcaggcacgg
ggggactggcagccacctgaagaaccgggcacagccgtggttgttctccatgtctggtgg
cggaaagtcacaacatttggaaaagtcagaaatgcagagcaagctagctacttaattcct
ttactggaaataaagatggaaaacagtttttatggcttgtcagctttcagcagccaagaa
ggaaatggattacctgtggctgtgactaagagacttatggccaacaagccaagttacctg
catgaggttctgccaagaagtattagactaactccagctttcacagtggttttactcaag
tttggaaaacaggcaggaatatctggaaaaagtcagaagcaactagcaaagaagataggg
atggagcacacagagaagggggagaaaaaccaaaaacatgtgtccttgaatgatgataat
gatgatgatgatgatgatgatgacgacgacgacgacgactag

>gi568815596r:212907363_213248645|GENSCAN_predicted_peptide_4|72_aa
MERYRFQRYSKGGKYWTALCWMYVGSEEGGLIKDDILVSDWEVKAHNDGSVTERGPVTLE
DESSRKNLQWNP

>gi568815596r:212907363_213248645|GENSCAN_predicted_CDS_4|219_bp
atggagagatacagattccaaagatattcaaaaggtggaaagtactggactgctctgtgc
tggatgtatgtcggtagtgaggaaggggggttaattaaggatgatatcctggtttctgac
tgggaagtgaaggcccacaatgatgggtcagtaactgagaggggccctgtgaccctagaa
gatgaatcctcaaggaagaatctccagtggaatccctga

>gi568815596r:212907363_213248645|GENSCAN_predicted_peptide_5|495_aa
MRTSNAKGYYMSKESSNSVKLEMQSDEECDRKPLSREDEIRGHDEGSSLEEPLIESSEVA
DNRKVQELQGEGGIRLPNGKLKCDVCGMVCIGPNVLMVHKRSHTGERPFHCNQCGASFTQ
KGNLLRHIKLHSGEKPFKCPFCSYACRRRDALTGHLRTHSVGKPHKCNYCGRSYKQRSSL
EEHKERCHNYLQNVSMEAAGQVMSHHVPPMEDCKEQEPIMDNNISLVPFERPAVIEKLTG
NMGKRKSSTPQKFVGEKLMRFSYPDIHFDMNLTYEKEAELMQSHMMDQAINNAITYLGAE
ALHPLMQHPPSTIAEVAPVISSAYSQVYHPNRIERPISRETADSHENNMDGPISLIRPKS
RPQEREASPSNSCLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKALDTTKAPK
GSLKDIYKVFNGEGEQIRAFKCEHCRVLFLDHVMYTIHMGCHGYRDPLECNICGYRSQDR
YEFSSHIVRGEHTFH

>gi568815596r:212907363_213248645|GENSCAN_predicted_CDS_5|1488_bp
atgaggacatccaatgcaaagggatactacatgagcaaagagagttcaaattcagtaaag
ctagaaatgcagagtgatgaagagtgtgacaggaaacccctgagccgtgaagatgagatc
aggggccatgatgagggtagcagcctagaagaacccctaattgagagcagcgaggtggct
gacaacaggaaagtccaggagcttcaaggcgagggaggaatccggcttccgaatggtaaa
ctgaaatgtgacgtctgtggcatggtttgcattgggcccaatgtgcttatggtacataaa
aggagtcacactggtgaacgccccttccactgtaaccagtgtggagcttcttttactcag
aagggcaaccttctgagacacataaagttacactctggagagaagccgttcaaatgtcct
ttctgtagctacgcctgtagaagaagggacgccctcacaggacacctcaggacccattct
gtgggtaaacctcacaagtgcaactactgtggacgaagctacaagcagcgcagttcactg
gaggagcacaaggaacgctgccacaactatctccagaatgtcagcatggaggctgctggg
caggtcatgagtcaccatgtacctcctatggaagattgtaaggaacaagagcctattatg
gacaacaatatttctctggtgccttttgagagacctgctgtcatagagaagctcacgggg
aatatgggaaaacgtaaaagctccactccacaaaagtttgtgggggaaaagctcatgcga
ttcagctacccagatattcactttgatatgaacttaacatatgagaaggaggctgagctg
atgcagtctcatatgatggaccaagccatcaacaatgcaatcacctaccttggagctgag
gcccttcaccctctgatgcagcacccgccaagcacaatcgctgaagtggccccagttata
agctcagcttattctcaggtctatcatccaaataggatagaaagacccattagcagggaa
actgctgatagtcatgaaaacaacatggatggccccatctctctcatcagaccaaagagt
cgaccccaggaaagagaggcctctcccagcaatagctgcctggattccactgactcagaa
agcagccatgatgaccaccagtcctaccaaggacaccctgccttaaatcccaagaggaaa
caaagcccagcttacatgaaggaggatgtcaaagctttggatactaccaaggctcctaag
ggctctctgaaggacatctacaaggtcttcaatggagaaggagaacagattagggccttc
aagtgtgagcactgccgagtccttttcctagaccatgtcatgtacaccattcacatgggt
tgccatggctaccgggacccactggaatgcaacatctgtggctacagaagccaggaccgt
tatgagttttcatcacacattgttcgaggggagcacacattccactag

>gi568815596r:212907363_213248645|GENSCAN_predicted_peptide_6|167_aa
MSYVTNTVFPLLSDYYVCRRPLLSRFRSRSMRCAFRNGAAELPAETTVKWINCTVNAIYQ
SDGQVACMESEEVPECFVMVFHCVSEGTLSVVSDSEQANLLIIDNGPVDKQALDNGETSA
CMCWILLVGSSSSRMTTEVTSAPWKAGKLELEQLSQSPDKQVLTGTE

>gi568815596r:212907363_213248645|GENSCAN_predicted_CDS_6|504_bp
atgagctatgtaaccaacactgtgtttcctcttttatctgattactatgtttgcagaaga
cccctcttatcccgcttcaggtcccggtcaatgcggtgcgctttccgaaatggggccgca
gagttgccggcggagaccactgttaagtggatcaactgtacagtcaatgctatttatcag
tctgatggccaggtggcatgtatggaatcggaagaagtacctgagtgctttgtgatggtc
tttcactgtgtgtctgagggaaccctaagtgttgtttctgactctgagcaggctaatttg
ctcatcatagacaatggacctgttgacaaacaggcactggataatggagaaacaagtgcc
tgcatgtgttggattttgttagttggatctagctccagcagaatgacaactgaggtcacg
tcagcaccttggaaggccgggaagctggaactggagcagctgagccaatccccagacaaa
caggttttaaccgggacagagtga

>gi568815596r:212907363_213248645|GENSCAN_predicted_peptide_7|70_aa
MAAIGYVILDLSMKPISVIEVTNTRNCESQERALRLKPFFLEEWGGEELVPFVAKRLKLS
RVTFAAIENQ

>gi568815596r:212907363_213248645|GENSCAN_predicted_CDS_7|213_bp
atggcagcaattggatatgtgatcttggacctgagtatgaagccaatatcggtgatagag
gtaacaaacacacggaattgtgagtctcaagaaagggccttgaggcttaagcctttcttt
ctagaagaatggggaggggaggagctagtcccatttgttgctaagcgactaaagctttct
cgggtcacgtttgcagctattgagaatcagtga

>gi568815596r:212907363_213248645|GENSCAN_predicted_peptide_8|150_aa
MEEIQCNQPIKNGFLISPKNDAVSSVDVCCWQVDHSAVAVVILILAEREAIRLSACTDST
MTIIIFALLWLRRESRSVDIHRKSHTVLCSGYALVCTGVRHKSSCFVPSVTAFCNKSMIQ
VTTSSRKMRDIGNRPGPIAEFGPNVQSSHV

>gi568815596r:212907363_213248645|GENSCAN_predicted_CDS_8|453_bp
atggaggagatccaatgtaatcaacctatcaagaatggctttcttatctccccaaagaat
gatgctgtatcaagtgttgatgtctgctgctggcaggttgatcattcagcagtggcagta
gttatcctcatccttgctgagagggaggctatacggttgagtgcatgtacagactccacc
atgacaattatcatttttgcactactatggctaagaagagagagtcggtcagttgacatc
cacaggaaaagtcatactgttctttgtagtggatatgctctggtatgcacaggtgttaga
cacaaatcctcatgctttgtgcccagtgtgacagctttctgcaataagagtatgattcag
gtaaccactagttcaaggaagatgagagatattggaaacagacctggacccattgcagag
tttggacccaatgttcagtccagccatgtctag

>gi568815596r:212907363_213248645|GENSCAN_predicted_peptide_9|95_aa
RVSEAGSEVELLATPGALSEYARHLQDPLVSIDLSERWRSWVSSLVDFAAPRIPVLSSPS
FFKQISDPNWVWSNDRNWTGSRNGFDLGINWLGSS

>gi568815596r:212907363_213248645|GENSCAN_predicted_CDS_9|288_bp
agggtgtcagaagcgggatctgaagtggagcttctagcgaccccaggagccctgagtgaa
tatgcaaggcacctgcaggacccactggtgtccattgatctctcagagcgctggagatcg
tgggtaagctccctcgtggatttcgcagctccacggattcctgttttgagctctccgagt
ttctttaagcaaatttctgatccaaactgggtttggagtaacgacagaaactggactgga
tccaggaatggatttgatttgggaattaactggcttggatccagttag