GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:28:11

Sequence gi568815596f:62952991_63156313 : 203323 bp : 37.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15876  15996  121  2  1   35   54   140 0.499   5.70
 1.02 Intr +  16797  16834   38  1  2   84   64    25 0.391  -3.24
 1.03 Intr +  26201  26345  145  1  1   21  105   214 0.576  15.33
 1.04 Intr +  34941  35048  108  1  0   80   48   145 0.995   9.04
 1.05 Intr +  37726  37850  125  2  2   61  106   151 0.998  13.58
 1.06 Intr +  40540  40678  139  0  1   68   75   142 0.975  10.02
 1.07 Intr +  40881  40978   98  1  2   90  -27    88 0.674  -3.69
 1.08 Intr +  43653  43776  124  2  1   87   96   158 0.758  15.74
 1.09 Intr +  84545  84644  100  0  1   14   84    82 0.043  -1.35
 1.10 Intr +  85753  85826   74  1  2   42  116   136 0.411   9.93
 1.11 Intr +  92076  92190  115  1  1   90   73   243 0.901  21.59
 1.12 Term +  92420  92510   91  2  1   62   42   118 0.860   0.81
 1.13 PlyA +  93469  93474    6                               1.05

 2.02 PlyA -  94309  94304    6                               1.05
 2.01 Sngl -  95154  94675  480  0  0   91   55   333 0.815  26.13
 2.00 Prom -  96425  96386   40                              -9.15

 3.00 Prom +  96709  96748   40                             -12.72
 3.01 Init +  96851  96935   85  1  1   64    9   103 0.482   1.03
 3.02 Intr +  97040  97162  123  0  0   -3  111   110 0.546   3.84
 3.03 Intr +  97756  97837   82  2  1   49   53   108 0.632   1.18
 3.04 Intr +  99224  99281   58  2  1   64   64    68 0.460  -0.03
 3.05 Intr +  99890 100097  208  1  1   91   88    98 0.825   7.83
 3.06 Intr + 101057 101208  152  0  2   80   85   222 0.994  20.06
 3.07 Intr + 101551 101649   99  0  0  119    7    63 0.616   0.69
 3.08 Intr + 102511 102733  223  0  1  107   47   358 0.990  30.38
 3.09 Intr + 104261 104392  132  0  0  106   59    90 0.905   7.60
 3.10 Intr + 106308 106469  162  1  0   63   75   113 0.479   6.53
 3.11 Term + 107080 107228  149  2  2   69   45   138 0.985   4.68
 3.12 PlyA + 107862 107867    6                               1.05

 4.05 PlyA - 109276 109271    6                               1.05
 4.04 Term - 117307 117194  114  1  0   89   38   147 0.592   7.39
 4.03 Intr - 119352 119205  148  2  1   40   92    38 0.058  -1.28
 4.02 Intr - 137169 135343 1827  2  0  -13   53   441 0.077  16.87
 4.01 Init - 137442 137279  164  0  2   68   72   123 0.215   7.95
 4.00 Prom - 138393 138354   40                              -6.15

 5.03 PlyA - 138563 138558    6                               1.05
 5.02 Term - 153556 153398  159  1  0   37   53   148 0.046   3.16
 5.01 Init - 180569 180492   78  2  0   79  100    40 0.465   5.41
 5.00 Prom - 184695 184656   40                              -3.05

 6.04 PlyA - 184812 184807    6                               1.05
 6.03 Term - 188067 187649  419  1  2   16   36   279 0.040   9.95
 6.02 Intr - 190341 190116  226  0  1   77    3    98 0.043  -3.16
 6.01 Intr - 191896 191745  152  2  2   64   88   129 0.346   9.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 188083 187649  435  1  0   25   36   303 0.953  14.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:62952991_63156313|GENSCAN_predicted_peptide_1|425_aa
MCMTGSAFVGPDLRSQRAFSSFLPTKEQPDNQQEALDVTQEKQRSGHPQRNEQQDEERRR
QLRERARQLIAEARSGVKMSELPSYGEMAAEKLKERSKASGDENDNIEIDTNEEIPEGFV
VGGGDELTNLENDLDTPEQNSKLVDLKLKKLLEVQPQVANSPSSAAQKAVTESSEQDMKS
GTEDLRTERLQKTTERFRNPVVFSKDSTVRKTQLQSFSQYIENRPEMKRQRSIQEDTKKG
NEEKAAITETQRKPSEDEKGFKDTSQYVVGELAALENEQKQIDTRAALVEKRLRYLMDTG
RNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLAIEDWQ
KTEAQKRREQLLLDELVALVNKRDALVRDLDAQEKQAEEEDEHLERTLEQNKGKMAKKEE
KCVLQ

>gi568815596f:62952991_63156313|GENSCAN_predicted_CDS_1|1278_bp
atgtgcatgactggcagtgcatttgttgggccagatctaaggagccagagagcgttcagc
tcctttttgcctacaaaagagcagccagacaaccagcaagaggccttggatgtaacacaa
gagaagcagagatcaggccatccccagagaaatgagcagcaagatgaagagcgacgtcgg
cagctgagagagagagctcgtcagctaatagcagaagctcgatctggagtgaagatgtca
gaacttcccagctatggtgaaatggctgcagaaaagttgaaagaaaggtcaaaggcatct
ggagatgaaaatgataatattgagatagatactaacgaggagatccctgaaggctttgtt
gtaggaggtggagatgaacttactaacttagaaaatgaccttgatactcccgaacaaaac
agtaagttggtggacttgaagctgaagaagctcctagaagttcagccacaggtggcaaat
tcaccctccagtgctgcccagaaagctgtaactgagagctcagagcaggacatgaaaagt
ggcacagaagatctccggactgaacgattacaaaaaacaacagaacgttttagaaatcct
gttgtgttcagcaaagattctacagtcagaaaaactcaacttcagtctttcagccaatat
attgagaatagaccagagatgaaaaggcagagatcaatacaggaagatacaaagaaagga
aatgaggagaaggcagcgataactgaaactcagaggaagccatcagaagatgaaaaaggg
ttcaaagacaccagtcagtatgtagtaggagaattggcagcactagagaatgagcaaaag
caaattgacacccgtgccgcgctggtggagaagcgccttcgctatctcatggacacagga
aggaacacagaagaagaagaagctatgatgcaggaatggtttatgttagttaataagaaa
aatgccttaataaggagaatgaatcagctctctcttctggaaaaagaacatgatttagaa
cgacggtatgagctgctgaaccgggaattgagggcaatgctagccattgaagactggcag
aagaccgaggcccagaagcgacgcgaacagcttctgctagatgagctggtggccctggtg
aacaagcgcgatgcgctcgtcagggacctggacgcgcaggagaagcaggccgaagaagaa
gatgagcatttggagcgaactctggagcaaaacaaaggcaagatggccaagaaagaggag
aaatgtgttcttcagtag

>gi568815596f:62952991_63156313|GENSCAN_predicted_peptide_2|159_aa
MTVPASAAVREGEVGTPLEEVKPSSSRPSSREGARELGVETRIQHPGDLQARPGSGGHLG
QGEGFGSEAEGSDQGRKFCSGPQTVPKQARCQRPCSSATLGPIVSFPAARAFEFRVLRRA
GLVPVLGSQRLGTTQRCPDAAPLPRALPRQAPESTLHRR

>gi568815596f:62952991_63156313|GENSCAN_predicted_CDS_2|480_bp
atgaccgttccagcatcggccgcggtgcgggaaggggaagtggggacaccactggaggag
gtgaagccgtccagctcaaggccctcgagccgggaaggggcgagggagctgggtgtggag
acaaggatccagcatccaggtgacctccaggcccggccaggctctggaggacacttggga
caaggggagggctttggatctgaggccgagggatctgaccaggggcggaagttctgctcc
ggcccgcagactgtgcccaagcaagcccgctgccaacgcccctgctcctctgcgaccctc
ggaccgatagtctcttttcccgcagcgcgggctttcgagttccgggtcctccggcgtgct
gggctcgtgcccgttctcgggagccagcgtctgggcaccacgcagcgatgtccggatgca
gcgcccttgccgcgggccttaccccgccaggcgccggagtccacgctccaccgccgctga

>gi568815596f:62952991_63156313|GENSCAN_predicted_peptide_3|490_aa
MGFARTNNPGKSPQGGSLRSMWKKVEGREVGCTCEGKRTLGSNVSVEALKTCKHPWWGPG
TPGDADEQAARAGPPIGGLAPLRTRLAFTYPGRAVESGPFGVLWPSAKPGPVTAVEARPP
DASDPEGLRGGSPAPLLAPGPLDPSGRLHPAVSMMSYLKQPPYGMNGLGLAGPAMDLLHP
SVGYPATPRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQDLAV
SLRGLNSASALVFHPGNPRNGRAEIGWSLVWFKNRRAKCRQQQQSGSGTKSRPAKKKSSP
VRESSGSESSGQFTPPAVSSSASSSSSASSSSANPAAAAAAGLVVAKLPCPLHIFSLCVF
IEENRLVSGSWARDIRSVEETDKSGYRGPLWLRQQLPMPLEARGSLRRALRGPAVLLAAK
WNETRRPGFALVWTTVWPPEQGSLFGLGLGVRDTIGAIRIEATSGDLATRENLATFRRQQ
FSFFEWSTKT

>gi568815596f:62952991_63156313|GENSCAN_predicted_CDS_3|1473_bp
atgggcttcgcccgtacgaacaatccggggaaatcgcctcaaggaggatccttacgcagc
atgtggaaaaaagttgagggcagggaagtagggtgtacgtgtgaggggaagaggacgctg
ggctccaacgtttcagtagaagcgcttaagacttgcaaacacccttggtggggacctgga
accccgggagatgccgacgagcaagcagcccgcgcggggcccccgattggcggcctagcc
ccgttacgcactcgcctcgcgttcacatacccggggagggcagtagaaagtggccccttc
ggcgtcctctggccctctgcgaagcctgggcccgttactgcggttgaggccaggccccca
gacgcatcagaccctgaaggactgcgtggtgggagccctgcaccgctcctggccccgggc
cccctggatccgtcggggcgcctccacccagctgttagcatgatgtcttacctcaaacaa
cccccatacggcatgaacgggctgggcctggccgggcccgccatggacctcctgcaccca
tccgtgggctatccggccactccgcggaagcagcggcgggagcgcaccaccttcacgcgt
tcacagctggacgtgctcgaggcgctcttcgccaagactcgctaccctgacatcttcatg
cgggaggaggtggcgctcaagatcaacctgccggagtctagagtccaggacttggcagtt
tcccttagaggcctgaattctgcctctgcccttgtcttccaccccgggaatcctagaaat
ggaagagcggagattggctggagcctggtctggttcaagaaccgccgcgccaaatgccgc
cagcagcagcagagcgggagcggaaccaagagccgcccagccaagaagaagtcctctcca
gtgcgggagagctcgggctccgaaagcagtggccaattcacgccgccagctgtgtccagc
tctgcctcgtcctctagctcggcgtccagctcttccgccaacccagcggctgcagcggct
gcgggactagttgttgcaaagctgccctgccctcttcacatcttctccctctgtgtattt
attgaagagaaccgcttggtttcaggaagctgggcgcgggatatccgaagtgtggaggaa
acagacaagtcagggtacagagggccgctttggctcaggcagcagctgccaatgccgctc
gaggcccgcggctccctgaggcgagctctgcggggcccagcagtcctcttggctgctaaa
tggaacgaaaccaggagacccggctttgcactcgtttggacaactgtgtggcctccggag
caaggaagtttgttcggtttgggtttgggtgttcgtgacacaatcggagcaattagaatt
gaagcaacttcaggagatttagcaacccgcgaaaatttagcaacgttcagacgtcaacag
ttttctttctttgagtggtcaacgaaaacttga

>gi568815596f:62952991_63156313|GENSCAN_predicted_peptide_4|750_aa
MGKFLDTHTLARLNQEEIESLNRPITGSEIVAIINTLPTKKSPGPDGFTAKFYQSRAETQ
PKKNFRPISLMNIDAKILNKILANQIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIQH
INRTKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGTDGTYLKIIRAIYDKPTANIILNG
QKLEAFPLKTGTRQGCPLSPLLFNIMLEVLARAISQEKEIKGIQLGKEEVKLSLFADDMI
VYLDNPVVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMRELPFTIASKR
IKYLGIQLTRDVKDLFKENYEPLLNEIKEDTNKWKNVPCSWVGRINIVKMAIVPKVIYRF
NVIPILLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTK
TAWYWYQNRDIYQWNRTQPSEITPHIYTYLIFDKPEKNKQWGKDSLFNKWCWENWLAICR
KLKLDPFLTPYTKINSRWIKDLNVIPKTIKTLEENLGITIQDIGMGQDFMSKTPKAMATK
AKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRMYNELKQIYKKKT
NNSIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTMRYHLTPVRMVIIKKS
GNNSLGDKARPCLKKRKEKKMFLTVGTKSLEEKAEGIRGTSSSLVKEYLKVSKILPALEY
WTPSSSVLELGLALLAPQPADGRLWDLVIL

>gi568815596f:62952991_63156313|GENSCAN_predicted_CDS_4|2253_bp
atgggtaaattcctcgacacacacaccctcgcaagactaaaccaggaagaaattgaatct
ctgaatagaccaataacaggctctgaaattgtggcaataatcaataccttaccaaccaaa
aagagtccaggaccagatggattcacagccaaattctaccagagccgggcagagacacaa
ccaaaaaagaactttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaa
atactggcaaaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggc
ttcatccctgggatgcaaggctggttcaatatatgcaaatcaataaatgtaatccagcat
ataaacagaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggccttt
gacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtactgatgggaca
tatctcaaaataataagagctatctatgacaaacccacagccaatatcatactgaatggg
caaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctcacca
ctcctattcaacataatgttggaagttctggccagggcaattagtcaggagaaggaaata
aagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgatt
gtatatctagacaaccctgttgtctcagcccaaaatctccttaagctaataagcaacttc
agcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatataccaat
aacagacaaacagagagccaaatcatgagggaactcccattcacaattgcttcaaagaga
ataaaatacctaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactac
gaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaatgttccgtgctca
tgggtaggaagaatcaatatcgtgaaaatggccatagtgcccaaggtaatttatagattc
aatgtcatccccatcctgctaccaatgactttcttcacagaattggaaaaaactacttta
aagttcatatggaaccaaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaac
aaagctggaggcatcacgctacctgacttcaaactatactacaaggctacagtaacaaaa
acagcatggtactggtaccaaaacagagatatatatcaatggaacagaacacagccctca
gaaataacgccacatatctacacctatctgatctttgacaaacctgagaaaaacaagcaa
tggggaaaggattctctatttaataaatggtgctgggaaaactggctagccatatgtaga
aagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatggattaaa
gacttaaacgttattcctaaaaccataaaaaccctagaagaaaacctaggcatcaccatt
caggacataggcatgggccaggacttcatgtctaaaacaccaaaagcaatggcaacaaaa
gccaaaattgacaaatgggatctcattaaactaaagagcttctgcacagcaaaagaaact
accatcagagtgaacaggcaacctacaaaatgggagaaaatttttgcaacctactcatct
gacaaagggctaatatccagaatgtacaatgaacttaaacaaatttacaagaaaaaaaca
aacaactccatcaaaaagtgggcgaaggatatgaacagacacttctcaaaagaagacatt
tatgcagccaaaaaacacatgaaaaaatgctcaccatcactggccatcagagaaatgcaa
atcaaaaccacaatgagataccatctcacaccagttagaatggtgatcattaaaaagtca
ggaaacaacagcctgggtgacaaggcgagaccctgtctgaaaaaaagaaaagaaaagaaa
atgtttctaacagtgggcacaaaaagcctagaagaaaaggcagaggggattcggggaact
tcaagcagcttagtgaaggaatatcttaaagtgtcaaagatacttcctgccctcgaatat
tggactccaagttcttcagttttggaacttggactggctctccttgctcctcagcctgca
gatggtcgattgtgggaccttgtgatcctgtaa

>gi568815596f:62952991_63156313|GENSCAN_predicted_peptide_5|78_aa
MGKTAPMIQLPPPGPTLDTWELLQFKTNPMTAAAASCCRTEVQENHTLQNCLRLLLPLRV
APLSPVAGFCSTVATVPI

>gi568815596f:62952991_63156313|GENSCAN_predicted_CDS_5|237_bp
atggggaaaactgcccccatgattcagttacctccacctggtcccacccttgacacgtgg
gaattattacaattcaagacaaatccgatgactgctgctgctgcaagctgttgcaggact
gaagtgcaagaaaatcatacactccagaactgtctgcgtttgctgctcccactgagagtg
gccccactttccccagtggcaggcttctgcagcacagttgccactgtccctatctga

>gi568815596f:62952991_63156313|GENSCAN_predicted_peptide_6|265_aa
XPTQMRRNQKTNPGNMTKQGSSTPPKNHTSSAAVDPNQEEIPDLPEKEFREKTHLTHKDS
HKLKVKGQKKAFHANGHQKRAGAAILIPDKTNFKVTAVKRDQEGHYIMVKTLSNRKYHNP
KNRGTCDAEKAFDKIQHPFMIKTLSKISIQRTYLNVINSIYDKPTANVILNGEKLKAFPL
GTGTRQECPLSPLLFNIVLEVLARAIRQEKEIKGIQISKQEVKLSLFADDTIVYLENPKD
SSRKLLELIKEFSKVSGYKINIQNQ

>gi568815596f:62952991_63156313|GENSCAN_predicted_CDS_6|798_bp
nagcctacccaaatgagaaggaaccagaaaacaaaccctggtaatatgacaaaacaaggc
tcttcaacacccccaaaaaatcacactagttcagcagcagtggatccaaatcaagaagaa
atccctgatttacctgaaaaagaatttagggagaagactcacctaacacataaggactca
cataaacttaaagtaaaggggcagaaaaaggcatttcatgcaaatggacaccaaaagcga
gcaggggcagctattcttataccagacaaaacaaattttaaagtaacagcagttaaaaga
gaccaagagggacattatataatggtaaaaaccttgtccaacaggaaatatcacaatcct
aaaaacagaggcacctgcgatgcagaaaaagcattcgacaaaatccagcatccctttatg
attaaaactctcagcaaaatcagcattcaaaggacataccttaatgtaataaactccatc
tatgacaaaccaacagcaaacgtgatactgaatggggaaaagttgaaagcattccctctg
ggaactggaacaagacaagaatgcccgctgtcaccactcctgttcaacatagtactggaa
gtcctagccagagcaatcagacaagagaaagaaataaagggcatccaaatcagtaaacag
gaagtcaaactgtcactgtttgctgatgatacaatcgtttaccttgaaaaccctaaggac
tcctccagaaagctcctagaactgataaaagaattcagcaaagtttctggatacaagatt
aatatacaaaatcagtag