GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:24:42

Sequence gi568815578f:33972075_34178546 : 206472 bp : 44.58% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   2678   2829  152  0  2   33   47   195 0.561   7.97
 1.02 PlyA +   2877   2882    6                               1.05

 2.00 Prom +   2919   2958   40                              -6.36
 2.01 Init +  10414  10602  189  0  0  107   89    62 0.557   7.21
 2.02 Intr +  20562  20688  127  2  1   68   76    65 0.566   3.55
 2.03 Intr +  24730  24784   55  2  1  135  103    47 0.637   8.94
 2.04 Term +  28023  28128  106  0  1   52   49    68 0.167  -2.82
 2.05 PlyA +  28151  28156    6                               1.05

 3.00 Prom +  28988  29027   40                              -2.56
 3.01 Init +  31443  31482   40  2  1   93   79    33 0.348   3.25
 3.02 Intr +  40954  41066  113  2  2   64  102     1 0.008  -0.80
 3.03 Intr +  45363  45431   69  2  0  108   79     1 0.019   0.58
 3.04 Intr +  87329  87392   64  1  1   81   92    51 0.434   3.09
 3.05 Term +  89149  89165   17  2  2  130   43    22 0.403   0.30
 3.06 PlyA +  91923  91928    6                               1.05

 4.00 Prom +  93785  93824   40                              -1.36
 4.01 Init +  99857  99868   12  1  0   73   96     5 0.565   0.01
 4.02 Intr +  99992 100256  265  1  1  105   94   360 0.632  35.39
 4.03 Intr + 101489 101561   73  0  1   82   75     8 0.998  -2.64
 4.04 Intr + 101745 101792   48  0  0  113   99   183 0.999  19.70
 4.05 Intr + 103800 103966  167  0  2   96   65   211 0.999  19.20
 4.06 Intr + 104628 104741  114  1  0   83   76   190 0.997  17.72
 4.07 Intr + 104954 105171  218  0  2   82   81   274 0.999  24.32
 4.08 Intr + 107836 107998  163  0  1  110   49   120 0.962   9.85
 4.09 Term + 109110 109165   56  1  2   76   44    45 0.284  -3.38
 4.10 PlyA + 111089 111094    6                               1.05

 5.10 PlyA - 111102 111097    6                               1.05
 5.09 Term - 117831 117656  176  1  2   87   28   139 0.945   5.72
 5.08 Intr - 118528 118443   86  0  2   64   89    10 0.811  -1.84
 5.07 Intr - 121657 121601   57  0  0   87  116    14 0.670   2.10
 5.06 Intr - 124731 124583  149  0  2   75   93   124 0.975  10.63
 5.05 Intr - 125442 125342  101  1  2   78   94    48 0.982   4.23
 5.04 Intr - 126559 126424  136  1  1   63   90   164 0.975  14.24
 5.03 Intr - 131491 131388  104  2  2  100   62   111 0.604   9.59
 5.02 Intr - 133471 133294  178  1  1   85  100   203 0.840  20.69
 5.01 Init - 135232 135188   45  1  0   81   87    -2 0.329  -0.32
 5.00 Prom - 136950 136911   40                              -6.76

 6.00 Prom + 139289 139328   40                              -8.36
 6.01 Sngl + 139530 140324  795  2  0   42   48   355 0.975  22.79
 6.02 PlyA + 142080 142085    6                               1.05

 7.00 Prom + 148065 148104   40                              -1.86
 7.01 Init + 150396 150450   55  2  1   81    7   113 0.869   3.95
 7.02 Intr + 150555 150987  433  1  1   -5   32   375 0.743  15.30
 7.03 Term + 151012 151216  205  1  1   19   46   249 0.969  10.64
 7.04 PlyA + 153699 153704    6                               1.05

 8.00 Prom + 162828 162867   40                              -2.76
 8.01 Init + 187887 187978   92  2  2   95   96    59 0.759   7.36
 8.02 Term + 202167 202305  139  0  1  100   44    89 0.808   3.14
 8.03 PlyA + 202378 202383    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:33972075_34178546|GENSCAN_predicted_peptide_1|50_aa
XPSGGIPEEGIVIIGVDSSMYVLPPKTFQWHEMWVDLEYDDIDDPDPVWA

>gi568815578f:33972075_34178546|GENSCAN_predicted_CDS_1|153_bp
ngtccttcaggaggtattcctgaagaaggcattgttatcataggagttgacagctccatg
tatgtattgccgccgaagaccttccagtggcatgagatgtgggtggacctggaatatgat
gatattgatgatcctgatcctgtgtgggcctag

>gi568815578f:33972075_34178546|GENSCAN_predicted_peptide_2|158_aa
MATRDIIGNYETTLICMSYGDSYENYQVGSKPSLFICALGGPSMGGRGSGSSSHTAGFGP
CGSGREVIKQQKDNYNCWYGKARTLNSNSAPFSGIPSVKQVLGKRSPENYRSTFCEFDYS
RNLIWKGENDSRNVNLLVLQLPPGYCKEIVLRVQLTDP

>gi568815578f:33972075_34178546|GENSCAN_predicted_CDS_2|477_bp
atggccaccagggacatcattgggaactatgaaaccactttaatttgtatgagctatgga
gattcttatgagaactatcaagttggtagcaagccctctctcttcatctgtgccttagga
ggcccatcaatgggaggaaggggatctggaagttcctcccatacagcagggtttggtccc
tgtgggtcaggcagggaggtcatcaaacaacagaaggacaattataactgctggtatggc
aaagccaggactctgaattcaaactctgctccattctcaggaatcccgtctgttaagcag
gttctggggaagcgatcccctgaaaactatcgttctactttctgtgaatttgactactct
aggaacctcatctggaagggagaaaatgacagccgtaatgttaacctgcttgtcctacaa
cttccccctgggtactgtaaggaaattgtgctcagggtgcagctcacagacccttag

>gi568815578f:33972075_34178546|GENSCAN_predicted_peptide_3|100_aa
MEQKTGGELFSGNIKYSINYVRYSTLYYKIGFVLVDFAHLKASVNVLRIFKTERELRLSP
WSCSKTGGNSLKPVEDLQQLSILGVFLSMLTWHMSGCSMT

>gi568815578f:33972075_34178546|GENSCAN_predicted_CDS_3|303_bp
atggagcaaaagactggaggtgaactgttcagcgggaacataaagtattcaataaattat
gtgagatattcaacactgtattataaaataggctttgtgttagttgattttgctcacctg
aaggctagtgttaatgttctgcgcatattcaagactgaacgggagctcaggctgtctccc
tggagctgttcaaagactggaggaaattctttaaaacctgtggaagacctgcagcagctg
tccatcctgggagtattcctgtctatgcttacgtggcacatgtcaggatgtagcatgacg
tag

>gi568815578f:33972075_34178546|GENSCAN_predicted_peptide_4|371_aa
MQEQVGTMSLKLQASNVTNKNDPKSINSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSV
HKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINMAGEPKPDRPKGLKRAASAIYSGYI
FDYDYYRDDFYDRLFDYRGRLSPVPVPRAVPVKRPRVTVPLVRRVKTNVPVKLFARSTAV
TTSSAKIKLKSSELQAIKTELTQIKSNIDALLSRLEQIAAEQKANPDGKKKGDGGGAGGG
GGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEARTRDDGDEEGLLTHSEEELP
DRSNGHQQVKGIAAPGLKPGTQPWMPPPSGYQRKAGSRRLLPQRIPASAMSSAGYKYLPW
SSELRDSYVAT

>gi568815578f:33972075_34178546|GENSCAN_predicted_CDS_4|1116_bp
atgcaggaacaggtgggcaccatgtccttgaagcttcaggcaagcaatgtaaccaacaag
aatgaccccaagtccatcaactctcgagtcttcattggaaacctcaacacagctctggtg
aagaaatcagatgtggagaccatcttctctaagtatggccgtgtggccggctgttctgtg
cacaagggctatgcctttgttcagtactccaatgagcgccatgcccgggcagctgtgctg
ggagagaatgggcgggtgctggccgggcagaccctggacatcaacatggctggagagcct
aagcctgacagacccaaggggctaaagagagcagcatctgccatatacagtggctacatc
tttgactatgattactaccgggacgacttctacgacaggctcttcgactaccggggccgt
ctgtcgcccgtgccagtgcccagggcggtccctgtgaagcgaccccgggtcacagtccct
ttggtccggcgtgtcaaaactaacgtacctgtcaagctctttgcccgctccacagctgtc
accaccagctcagccaagatcaagttaaagagcagtgagctgcaggccatcaagacggag
ctgacacagatcaagtccaatatcgatgccctgctgagccgcttggagcagatcgctgcg
gagcaaaaggccaatccagatggcaagaagaagggtgatggaggtggcgccggcggcggc
ggcggtggtggtggcagcggtggcggtggcagtggtggtggcggtggcggtggcagcagc
cggccaccagccccccaagagaacacaacttctgaggcaggcctgccccagggggaagca
cggacccgagacgacggcgatgaggaagggctcctgacacacagcgaggaagagctgcct
gacaggagcaatggccaccagcaggtgaagggcatcgctgccccaggcctcaagccgggc
acccaaccctggatgccaccccccagcgggtaccagaggaaagctggcagcaggcgcctc
ctcccccaacgcatcccagccagtgccatgtcctctgcaggttacaagtacctaccctgg
tccagtgaactgcgggattcatatgtggccacttag

>gi568815578f:33972075_34178546|GENSCAN_predicted_peptide_5|343_aa
MLNLSMVLIEYGERLMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTE
DKDLEADEEDTRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEP
TEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGS
ERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLH
RQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTI
LQKDTRLYFLQCETCHSRCSVASIKTGFQAVTGKRAQLRAKAN

>gi568815578f:33972075_34178546|GENSCAN_predicted_CDS_5|1032_bp
atgctgaatttaagcatggtattaatagaatatggagagagattgatgatttttgatcct
actatgagcaagaagaaaaagaagaagaagaagccttttatgttagatgaggaaggggat
acccaaacagaggaaacccagccttcagaaacaaaagaagtggagccagagccaactgag
gacaaggatttggaagctgatgaagaggacactaggaaaaaagatgcttctgatgatcta
gatgacttgaacttctttaatcaaaagaaaaagaagaaaaaaactaaaaagatatttgat
attgatgaagctgaagaaggtgtaaaggatcttaagattgaaagtgatgttcaagaacca
actgaaccagaggatgaccttgacattatgcttggcaataaaaagaagaaaaagaagaat
gttaagttcccagatgaggatgaaatactagagaaagatgaagctctagaagatgaagac
aacaaaaaagatgatggtatctcattcagtaatcagacaggccctgcttgggcaggctca
gaaagagactacacatacgaggagctgctgaatcgagtgttcaacatcatgagggaaaag
aatccagatatggttgctggggagaaaaggaaatttgtcatgaaacctccacaagtcgtc
cgagtaggaaccaagaaaacttcttttgtcaactttacagatatctgtaaactattacat
cgtcagcccaaacatctccttgcatttttgttggctgaattgggtacaagtggttctata
gatggtaataaccaacttgtaatcaaaggaagattccaacagaaacagatagaaaatgtc
ttgagaagatatatcaaggaatatgtcacttgtcacacatgccgatcaccggacacaatc
ctgcagaaggacacacgactctatttcctacagtgcgaaacttgtcattctagatgttct
gttgccagtatcaaaaccggcttccaggctgtcacgggcaagcgagcacagctccgtgcc
aaagctaactaa

>gi568815578f:33972075_34178546|GENSCAN_predicted_peptide_6|264_aa
MLGRQTRAGYRPRQDSLESFNEGVIPSQERLLAAPLAPPAPSEASWGGSAQQKGMQGSPA
PVSFGVINRAFEPLPGGRLNVCSPFRKRQPRQEVRLSAAALRKAGCGQACGSGVLAGSAA
PGRLGAAASHGGGRLLGRRPVLPHWSGLGFSPQSLALTPGSDPHLVPRHGCGSSGLGTDG
KSDGSAPGPGGSAAPADTSPTTALGSCISERKRHPALSSKRWKCACAELAKAQARRRANL
ARFVWRELPGDAASPGMPGLVVHL

>gi568815578f:33972075_34178546|GENSCAN_predicted_CDS_6|795_bp
atgctaggaaggcaaacaagggcgggataccggccccgacaagatagcctagaaagtttt
aacgagggcgttataccaagccaagagaggctcctcgcggcacccctggcacccccggca
cccagtgaggcgagctggggcggcagtgcccagcagaaaggaatgcagggatcgccagcc
ccagtctcgttcggggttattaaccgggcattcgagccccttccgggaggacgactcaac
gtgtgctctccattccggaaacgccaaccacggcaggaggtccgcctcagcgctgccgcc
ctgaggaaagcgggctgcggccaagcctgcggctccggagtcctcgccggctctgccgct
ccgggccgcctaggcgcggctgcctcacatggcggcggccggctgctaggccgcaggccc
gttctcccacactggagtgggttaggcttctcgcctcaatccttagcccttacgccgggc
tcagatcctcacctcgtccccagacatggctgcggctcgagtgggctcggcacggacggg
aagtcagacgggtcagccccaggccccggcggcagcgctgcccctgccgatacctctccc
accaccgcactaggctcttgcatcagcgaaaggaaacgacaccccgccctctcctccaag
cgttggaaatgcgcctgcgcagagctcgccaaggcgcaggcgcgcagaagagccaaccta
gcgcgcttcgtgtggcgcgagttaccaggcgacgccgcgtcgccaggcatgccgggactt
gtagtccatttataa

>gi568815578f:33972075_34178546|GENSCAN_predicted_peptide_7|230_aa
MGNRGGFRGGFGGGIRGQGHEDQVPGGCLFSLPIKESETIDFFLGSSLKEEGLKIMPVQK
QTRAGQRTRFKAFVATGDYNGHVGLCVKCSKEVATAIRGSVILTKHSIVPVRRGYGGTRW
TSPHRPLQGDRPLRLCAGAPHPCTQGHWHRLRTCAQEAPHDGCQGLHCHPGNFAKATFDT
ISKTYSYLTLDLWKETIFTKSPYQEFTDHLVKTHTRVSMQRTQAPAVATA

>gi568815578f:33972075_34178546|GENSCAN_predicted_CDS_7|693_bp
atggggaaccgcggtggcttccgcggaggtttcggcggtggcatccggggccagggacat
gaagatcaagtacctggaggatgtctcttctccctgcccatcaaggaatctgagaccatt
gacttttttctggggtcctctctcaaggaagagggtttgaagattatgccggtgcagaag
cagacccgcgcgggccagcgcaccaggttcaaggcgtttgttgccaccggggactacaat
ggccacgtcggtctgtgcgttaagtgctccaaggaggtggctactgccatccgcgggtcc
gtcatcctgaccaagcactccattgtccccgtgcgcagaggctacgggggaacaagatgg
acaagcccacaccgtcccttgcaaggtgacaggccgctgcggctctgtgctggtgcacct
catccctgcacccaggggcactggcatcgtctccgcacctgtgcccaagaagctcctcat
gatggctgccaggggctgcactgccaccctggcaacttcgccaaggccacctttgacacc
atctctaagacctacagctacctgaccctcgacctctggaaggagactatattcaccaag
tctccctatcaggaattcactgaccacctcgtcaagacccacaccagagtctccatgcag
aggacccaggctccagctgtggctacagcatag

>gi568815578f:33972075_34178546|GENSCAN_predicted_peptide_8|76_aa
MKNLSQARTIIVPHSPGNSNWSKEQAYDPESPPPEISADQNRSLKKLPEAGESSTRKEQK
EQSSEYQPQQDKIHYV

>gi568815578f:33972075_34178546|GENSCAN_predicted_CDS_8|231_bp
atgaagaatttgtctcaggcccggacaatcatagttcctcattcccctggcaacagtaat
tggtccaaggagcaggcatatgacccagaaagtccccctcctgaaattagtgctgatcag
aacagaagtttgaagaaactacctgaggctggagaaagtagcaccagaaaagagcagaag
gaacaatcctcagagtaccagccccaacaagataaaattcactatgtctga