Result of FASTA (omim) for pF1KB6689
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6689, 335 aa
  1>>>pF1KB6689 335 - 335 aa - 335 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.5161+/-0.000428; mu= 3.8962+/- 0.026
 mean_var=161.2819+/-33.699, 0's: 0 Z-trim(114.4): 200  B-trim: 493 in 1/57
 Lambda= 0.100991
 statistics sampled from 23837 (24174) to 23837 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.283), width:  16
 Scan time:  7.940

The best scores are:                                      opt bits E(85289)
NP_001123486 (OMIM: 176394) pregnancy-specific bet ( 335) 2254 340.9 2.3e-93
NP_002772 (OMIM: 176394) pregnancy-specific beta-1 ( 335) 2254 340.9 2.3e-93
XP_016882492 (OMIM: 176394) PREDICTED: pregnancy-s ( 335) 2254 340.9 2.3e-93
NP_001263424 (OMIM: 176393) pregnancy-specific bet ( 326) 1898 289.0 9.2e-78
XP_016882490 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 1898 289.0 9.4e-78
NP_001317453 (OMIM: 176390) pregnancy-specific bet ( 326) 1856 282.9 6.4e-76
XP_005259122 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 1856 282.9 6.5e-76
NP_001288636 (OMIM: 176398) pregnancy-specific bet ( 333) 1853 282.5 8.8e-76
XP_016882494 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 1843 281.1 2.8e-75
XP_016882487 (OMIM: 176393) PREDICTED: pregnancy-s ( 349) 1766 269.8   6e-72
XP_011525428 (OMIM: 176392) PREDICTED: pregnancy-s ( 357) 1724 263.7 4.2e-70
NP_112536 (OMIM: 176391) pregnancy-specific beta-1 ( 335) 1713 262.1 1.2e-69
NP_002776 (OMIM: 176401) pregnancy-specific beta-1 ( 335) 1651 253.0 6.4e-67
NP_998798 (OMIM: 176393) pregnancy-specific beta-1 ( 326) 1631 250.1 4.7e-66
XP_016882491 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 1631 250.1 4.8e-66
XP_011525288 (OMIM: 176397) PREDICTED: pregnancy-s ( 326) 1613 247.5 2.9e-65
NP_001288637 (OMIM: 176398) pregnancy-specific bet ( 333) 1607 246.6 5.4e-65
XP_005259132 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 1597 245.2 1.7e-64
XP_011525427 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 1584 243.3 5.6e-64
XP_016882489 (OMIM: 176393) PREDICTED: pregnancy-s ( 342) 1499 230.9   3e-60
XP_016882488 (OMIM: 176393) PREDICTED: pregnancy-s ( 349) 1499 230.9 3.1e-60
XP_016881685 (OMIM: 615747) PREDICTED: carcinoembr ( 331) 1272 197.8 2.7e-50
XP_016881683 (OMIM: 615747) PREDICTED: carcinoembr ( 368) 1265 196.8 5.9e-50
XP_011524642 (OMIM: 615747) PREDICTED: carcinoembr ( 415) 1265 196.9 6.4e-50
XP_016881684 (OMIM: 615747) PREDICTED: carcinoembr ( 349) 1260 196.1 9.3e-50
NP_001807 (OMIM: 615747) carcinoembryonic antigen- ( 349) 1260 196.1 9.3e-50
NP_002474 (OMIM: 163980) carcinoembryonic antigen- ( 344) 1234 192.3 1.3e-48
XP_011525292 (OMIM: 163980) PREDICTED: carcinoembr ( 324) 1228 191.4 2.2e-48
NP_001171744 (OMIM: 109770) carcinoembryonic antig ( 461) 1217 189.9 8.9e-48
NP_066296 (OMIM: 176392) pregnancy-specific beta-1 ( 428) 1212 189.2 1.4e-47
XP_011525508 (OMIM: 109770) PREDICTED: carcinoembr ( 351) 1207 188.4   2e-47
NP_002774 (OMIM: 176396) putative pregnancy-specif ( 419) 1207 188.4 2.3e-47
NP_001171745 (OMIM: 109770) carcinoembryonic antig ( 368) 1206 188.2 2.3e-47
NP_001020083 (OMIM: 109770) carcinoembryonic antig ( 464) 1207 188.5 2.4e-47
NP_001192273 (OMIM: 109770) carcinoembryonic antig ( 468) 1207 188.5 2.5e-47
NP_001171742 (OMIM: 109770) carcinoembryonic antig ( 430) 1206 188.3 2.6e-47
NP_001703 (OMIM: 109770) carcinoembryonic antigen- ( 526) 1207 188.5 2.7e-47
NP_001123639 (OMIM: 176397) pregnancy-specific bet ( 419) 1185 185.2 2.1e-46
NP_874366 (OMIM: 176397) pregnancy-specific beta-1 ( 426) 1185 185.2 2.1e-46
NP_001171755 (OMIM: 176390) pregnancy-specific bet ( 417) 1183 184.9 2.5e-46
NP_001171754 (OMIM: 176390) pregnancy-specific bet ( 419) 1183 184.9 2.6e-46
NP_008836 (OMIM: 176390) pregnancy-specific beta-1 ( 426) 1183 184.9 2.6e-46
NP_001284702 (OMIM: 176390) pregnancy-specific bet ( 428) 1183 184.9 2.6e-46
XP_011525429 (OMIM: 176392) PREDICTED: pregnancy-s ( 272) 1160 181.4 1.9e-45
NP_002771 (OMIM: 176393) pregnancy-specific beta-1 ( 419) 1163 182.0 1.9e-45
XP_016882486 (OMIM: 176393) PREDICTED: pregnancy-s ( 426) 1163 182.0   2e-45
XP_011524624 (OMIM: 114890) PREDICTED: carcinoembr ( 524) 1154 180.8 5.7e-45
NP_002775 (OMIM: 176398) pregnancy-specific beta-1 ( 426) 1151 180.3 6.6e-45
XP_016882496 (OMIM: 176398) PREDICTED: pregnancy-s ( 436) 1151 180.3 6.7e-45
XP_016882493 (OMIM: 176398) PREDICTED: pregnancy-s ( 495) 1151 180.3 7.4e-45


>>NP_001123486 (OMIM: 176394) pregnancy-specific beta-1-  (335 aa)
 initn: 2254 init1: 2254 opt: 2254  Z-score: 1797.2  bits: 340.9 E(85289): 2.3e-93
Smith-Waterman score: 2254; 99.4% identity (100.0% similar) in 335 aa overlap (1-335:1-335)

               10        20        30        40        50        60
pF1KB6 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMHSDPVTLNVLYGPD
       ::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_001 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMRSDPVTLNVLYGPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
              250       260       270       280       290       300

              310       320       330     
pF1KB6 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
       :::::::::::::::::::::::::::::::::::
NP_001 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
              310       320       330     

>>NP_002772 (OMIM: 176394) pregnancy-specific beta-1-gly  (335 aa)
 initn: 2254 init1: 2254 opt: 2254  Z-score: 1797.2  bits: 340.9 E(85289): 2.3e-93
Smith-Waterman score: 2254; 99.4% identity (100.0% similar) in 335 aa overlap (1-335:1-335)

               10        20        30        40        50        60
pF1KB6 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_002 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMHSDPVTLNVLYGPD
       ::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_002 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMRSDPVTLNVLYGPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
              250       260       270       280       290       300

              310       320       330     
pF1KB6 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
       :::::::::::::::::::::::::::::::::::
NP_002 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
              310       320       330     

>>XP_016882492 (OMIM: 176394) PREDICTED: pregnancy-speci  (335 aa)
 initn: 2254 init1: 2254 opt: 2254  Z-score: 1797.2  bits: 340.9 E(85289): 2.3e-93
Smith-Waterman score: 2254; 99.4% identity (100.0% similar) in 335 aa overlap (1-335:1-335)

               10        20        30        40        50        60
pF1KB6 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
XP_016 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMHSDPVTLNVLYGPD
       ::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
XP_016 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMRSDPVTLNVLYGPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
              250       260       270       280       290       300

              310       320       330     
pF1KB6 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
       :::::::::::::::::::::::::::::::::::
XP_016 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
              310       320       330     

>>NP_001263424 (OMIM: 176393) pregnancy-specific beta-1-  (326 aa)
 initn: 1898 init1: 1898 opt: 1898  Z-score: 1517.0  bits: 289.0 E(85289): 9.2e-78
Smith-Waterman score: 1898; 88.5% identity (94.1% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB6 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
       :::::::::::.::::::::::::::::: : :::::::: :::::::::::::::::::
NP_001 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
       :::::::::::.  :::::::::::::  ::::::.::: :::::::::::::.::::::
NP_001 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
       ::::::: : : ::::.:::.:. :: :::::::: .::::::::.:::::::.::::::
NP_001 TLHIIKRRDGTGGVTGHFTFTLHPKLSKPYITINNLNPRENKDVLTFTCEPKSKNYTYIW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMHSDPVTLNVLYGPD
       :::::::::::::::::::::::::.:::::::::.:::::: ::..:::::::::::::
NP_001 WLNGQSLPVSPRVKRPIENRILILPNVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
       ::::::::::::::::::::::::::: :.: :::::::: :::::::::::::: :::.
NP_001 LPSIYPSFTYYRSGENLYLSCFAESNPRAQYSWTINGKFQLSGQKLSIPQITTKHSGLYA
              250       260       270       280       290       300

              310       320       330     
pF1KB6 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
       :::::::::::::::.::.::              
NP_001 CSVRNSATGKESSKSITVKVSDWILP         
              310       320               

>>XP_016882490 (OMIM: 176393) PREDICTED: pregnancy-speci  (333 aa)
 initn: 1898 init1: 1898 opt: 1898  Z-score: 1516.9  bits: 289.0 E(85289): 9.4e-78
Smith-Waterman score: 1898; 88.5% identity (94.1% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB6 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
       :::::::::::.::::::::::::::::: : :::::::: :::::::::::::::::::
XP_016 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
       :::::::::::.  :::::::::::::  ::::::.::: :::::::::::::.::::::
XP_016 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
       ::::::: : : ::::.:::.:. :: :::::::: .::::::::.:::::::.::::::
XP_016 TLHIIKRRDGTGGVTGHFTFTLHPKLSKPYITINNLNPRENKDVLTFTCEPKSKNYTYIW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMHSDPVTLNVLYGPD
       :::::::::::::::::::::::::.:::::::::.:::::: ::..:::::::::::::
XP_016 WLNGQSLPVSPRVKRPIENRILILPNVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
       ::::::::::::::::::::::::::: :.: :::::::: :::::::::::::: :::.
XP_016 LPSIYPSFTYYRSGENLYLSCFAESNPRAQYSWTINGKFQLSGQKLSIPQITTKHSGLYA
              250       260       270       280       290       300

              310       320       330     
pF1KB6 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
       :::::::::::::::.::.::              
XP_016 CSVRNSATGKESSKSITVKVSGKWIPASLAIGI  
              310       320       330     

>>NP_001317453 (OMIM: 176390) pregnancy-specific beta-1-  (326 aa)
 initn: 1856 init1: 1856 opt: 1856  Z-score: 1484.0  bits: 282.9 E(85289): 6.4e-76
Smith-Waterman score: 1856; 86.9% identity (92.2% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB6 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
       :: ::::::::.: :::.::::::::::::: :::::::: : :::::::::::::::::
NP_001 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
       ::.::::::::. :::::::::::::.: ::::::.::::.:::::::::::::::::::
NP_001 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
       ::::::  : :::::: :::.:. ::::::::::: .:::::::: ::::::::::::::
NP_001 TLHIIKGDDGTRGVTGRFTFTLHPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMHSDPVTLNVLYGPD
       :::::::::::::::::::::::::::::::::::.:::::: ::..:::::::::::::
NP_001 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
       :: :::::::::::: ::::: :.:::::.: :::: :::  :::: : .::::: :::.
NP_001 LPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLPGQKLFIRHITTKHSGLYV
              250       260       270       280       290       300

              310       320       330     
pF1KB6 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
       :::::::::::::::::::::              
NP_001 CSVRNSATGKESSKSMTVEVSDWTVP         
              310       320               

>>XP_005259122 (OMIM: 176390) PREDICTED: pregnancy-speci  (333 aa)
 initn: 1856 init1: 1856 opt: 1856  Z-score: 1483.8  bits: 282.9 E(85289): 6.5e-76
Smith-Waterman score: 1856; 86.9% identity (92.2% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB6 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
       :: ::::::::.: :::.::::::::::::: :::::::: : :::::::::::::::::
XP_005 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
       ::.::::::::. :::::::::::::.: ::::::.::::.:::::::::::::::::::
XP_005 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
       ::::::  : :::::: :::.:. ::::::::::: .:::::::: ::::::::::::::
XP_005 TLHIIKGDDGTRGVTGRFTFTLHPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMHSDPVTLNVLYGPD
       :::::::::::::::::::::::::::::::::::.:::::: ::..:::::::::::::
XP_005 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
       :: :::::::::::: ::::: :.:::::.: :::: :::  :::: : .::::: :::.
XP_005 LPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLPGQKLFIRHITTKHSGLYV
              250       260       270       280       290       300

              310       320       330     
pF1KB6 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
       :::::::::::::::::::::              
XP_005 CSVRNSATGKESSKSMTVEVSGKWIPASLAIGF  
              310       320       330     

>>NP_001288636 (OMIM: 176398) pregnancy-specific beta-1-  (333 aa)
 initn: 1931 init1: 1853 opt: 1853  Z-score: 1481.5  bits: 282.5 E(85289): 8.8e-76
Smith-Waterman score: 1853; 84.5% identity (92.3% similar) in 323 aa overlap (1-323:1-323)

               10        20        30        40        50        60
pF1KB6 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
       :::: :: :::.:::::.::::::::::: : ::.::::: :::::::::::::::::::
NP_001 MGPLPAPSCTQRITWKGLLLTASLLNFWNPPTTAEVTIEAQPPKVSEGKDVLLLVHNLPQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
       :: ::.::::.. :::::: ::.:::.: ::::::.::::::::::::::::::.:::.:
NP_001 NLPGYFWYKGEMTDLYHYIISYIVDGKIIIYGPAYSGRETVYSNASLLIQNVTRKDAGTY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
       :::::::::.::    .:::.:: ::: ::::::: .:::::::::::::::::::::::
NP_001 TLHIIKRGDETREEIRHFTFTLYSKLPIPYITINNLNPRENKDVLAFTCEPKSENYTYIW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMHSDPVTLNVLYGPD
       ::::::::::: :::::::::::::::::::::::.:::::: ::..:.:: ::::::::
NP_001 WLNGQSLPVSPGVKRPIENRILILPSVTRNETGPYQCEIRDRYGGLRSNPVILNVLYGPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
       :: :::::::::::::: ::::.::::::::::::::::::::::: ::::: .: :::.
NP_001 LPRIYPSFTYYRSGENLDLSCFTESNPPAEYFWTINGKFQQSGQKLFIPQITRNHSGLYA
              250       260       270       280       290       300

              310       320       330     
pF1KB6 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
       :::.::::::: ::::::.::.:            
NP_001 CSVHNSATGKEISKSMTVKVSGPCHGDLTESQS  
              310       320       330     

>>XP_016882494 (OMIM: 176398) PREDICTED: pregnancy-speci  (402 aa)
 initn: 1843 init1: 1843 opt: 1843  Z-score: 1472.5  bits: 281.1 E(85289): 2.8e-75
Smith-Waterman score: 1843; 84.7% identity (92.2% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB6 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ
       :::: :: :::.:::::.::::::::::: : ::.::::: :::::::::::::::::::
XP_016 MGPLPAPSCTQRITWKGLLLTASLLNFWNPPTTAEVTIEAQPPKVSEGKDVLLLVHNLPQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY
       :: ::.::::.. :::::: ::.:::.: ::::::.::::::::::::::::::.:::.:
XP_016 NLPGYFWYKGEMTDLYHYIISYIVDGKIIIYGPAYSGRETVYSNASLLIQNVTRKDAGTY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW
       :::::::::.::    .:::.:: ::: ::::::: .:::::::::::::::::::::::
XP_016 TLHIIKRGDETREEIRHFTFTLYSKLPIPYITINNLNPRENKDVLAFTCEPKSENYTYIW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMHSDPVTLNVLYGPD
       ::::::::::: :::::::::::::::::::::::.:::::: ::..:.:: ::::::::
XP_016 WLNGQSLPVSPGVKRPIENRILILPSVTRNETGPYQCEIRDRYGGLRSNPVILNVLYGPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYT
       :: :::::::::::::: ::::.::::::::::::::::::::::: ::::: .: :::.
XP_016 LPRIYPSFTYYRSGENLDLSCFTESNPPAEYFWTINGKFQQSGQKLFIPQITRNHSGLYA
              250       260       270       280       290       300

              310       320       330                              
pF1KB6 CSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI                         
       :::.::::::: ::::::.::                                       
XP_016 CSVHNSATGKEISKSMTVKVSGKWIPASLAVGFYVESIWLSEKSQENIFIPSLCPMGTSK
              310       320       330       340       350       360

>>XP_016882487 (OMIM: 176393) PREDICTED: pregnancy-speci  (349 aa)
 initn: 1754 init1: 1754 opt: 1766  Z-score: 1412.7  bits: 269.8 E(85289): 6e-72
Smith-Waterman score: 1766; 84.0% identity (91.2% similar) in 319 aa overlap (3-321:19-337)

                               10        20        30        40    
pF1KB6                 MGPLSAPPCTQHITWKGVLLTASLLNFWNLPITAQVTIEALPPK
                         : .. : ..::  .   . :::::::: : :::::::: :::
XP_016 MKHCPQQETSTIGGKKKHPEGGDPENSHIYRSLPPVPASLLNFWNPPTTAQVTIEAQPPK
               10        20        30        40        50        60

           50        60        70        80        90       100    
pF1KB6 VSEGKDVLLLVHNLPQNLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSN
       :::::::::::::::::::::::::::.  :::::::::::::  ::::::.::: ::::
XP_016 VSEGKDVLLLVHNLPQNLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSN
               70        80        90       100       110       120

          110       120       130       140       150       160    
pF1KB6 ASLLIQNVTREDAGSYTLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDV
       :::::::::.::::::::::::: : : ::::.:::.:. :: :::::::: .:::::::
XP_016 ASLLIQNVTQEDAGSYTLHIIKRRDGTGGVTGHFTFTLHPKLSKPYITINNLNPRENKDV
              130       140       150       160       170       180

          170       180       190       200       210       220    
pF1KB6 LAFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDG
       :.:::::::.:::::::::::::::::::::::::::::::.:::::::::.:::::: :
XP_016 LTFTCEPKSKNYTYIWWLNGQSLPVSPRVKRPIENRILILPNVTRNETGPYQCEIRDRYG
              190       200       210       220       230       240

          230       240       250       260       270       280    
pF1KB6 GMHSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQSGQ
       :..:::::::::::::::::::::::::::::::::::::::: :.: :::::::: :::
XP_016 GIRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSCFAESNPRAQYSWTINGKFQLSGQ
              250       260       270       280       290       300

          290       300       310       320       330     
pF1KB6 KLSIPQITTKHRGLYTCSVRNSATGKESSKSMTVEVSAPSGIGRLPLLNPI
       ::::::::::: :::.:::::::::::::::.::.::              
XP_016 KLSIPQITTKHSGLYACSVRNSATGKESSKSITVKVSGKWIPASLAIGI  
              310       320       330       340           




335 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 18:14:22 2016 done: Sat Nov  5 18:14:23 2016
 Total Scan time:  7.940 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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