GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:07:03

Sequence gi568815585f:45020656_45383558 : 362903 bp : 42.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   7130   7348  219  1  0  104   42   147 0.977   7.76
 1.02 PlyA +   7585   7590    6                               1.05

 2.00 Prom +  10198  10237   40                              -5.75
 2.01 Init +  17665  17757   93  0  0  114   60    26 0.691   2.83
 2.02 Intr +  25927  26069  143  0  2   20   64   136 0.016   2.63
 2.03 Intr +  32333  32504  172  2  1   38   69   109 0.081   3.02
 2.04 Term +  33586  33837  252  0  0  120   38   187 0.566  11.55
 2.05 PlyA +  34165  34170    6                               1.05

 3.00 Prom +  40644  40683   40                              -6.75
 3.01 Init +  41082  41100   19  2  1   97   48    14 0.602  -1.39
 3.02 Intr +  44065  44257  193  2  1   85   78   126 0.549   8.93
 3.03 Intr +  57527  57783  257  2  2  130   70    66 0.323   5.16
 3.04 Intr +  63089  63167   79  0  1   68   94    76 0.199   3.89
 3.05 Intr +  85604  85774  171  2  0   82   54   118 0.490   5.94
 3.06 Intr +  99867 100066  200  0  2   92   90   190 0.832  17.67
 3.07 Intr + 102565 102696  132  2  0   63   28   148 0.418   6.00
 3.08 Intr + 109222 109388  167  2  2   -1  100   125 0.059   3.56
 3.09 Intr + 116078 116151   74  1  2   82  108    89 0.251   7.59
 3.10 Intr + 129115 129133   19  1  1  124   94     1 0.213  -0.00
 3.11 Intr + 131032 131176  145  0  1   67  111   100 0.874   9.13
 3.12 Intr + 135508 135569   62  2  2   53  119   -14 0.421  -4.27
 3.13 Term + 135962 136036   75  1  0   87   54    98 0.542   3.16
 3.14 PlyA + 136212 136217    6                               1.05

 4.05 PlyA - 137093 137088    6                               1.05
 4.04 Term - 137522 137372  151  1  1   82   48    81 0.061  -0.10
 4.03 Intr - 158465 158303  163  0  1   39   75   131 0.274   5.01
 4.02 Intr - 162552 162427  126  1  0   29   52   101 0.472   0.33
 4.01 Init - 168555 168480   76  0  1   83   99    46 0.967   6.50
 4.00 Prom - 168732 168693   40                              -3.65

 5.02 PlyA - 169082 169077    6                               1.05
 5.01 Sngl - 173912 173133  780  2  0   71   32   602 0.994  48.64
 5.00 Prom - 180939 180900   40                              -4.55

 6.00 Prom + 185636 185675   40                              -4.15
 6.01 Init + 185912 185957   46  1  1   68   41    13 0.004  -4.50
 6.02 Intr + 186769 186850   82  2  1   73   81   110 0.006   6.58
 6.03 Intr + 232216 232315  100  1  1   84  101    88 0.032   8.89
 6.04 Intr + 246578 246721  144  1  0   70   68   141 0.458   9.86
 6.05 Term + 262787 262906  120  1  0   88   48   136 0.624   7.09
 6.06 PlyA + 263326 263331    6                               1.05

 7.00 Prom + 269154 269193   40                              -6.15
 7.01 Init + 276379 276477   99  0  0   51  116   103 0.972   9.71
 7.02 Intr + 277517 277576   60  1  0   64  105    62 0.885   3.51
 7.03 Intr + 279860 279978  119  1  2   60   73    89 0.381   2.94
 7.04 Term + 280794 280863   70  0  1   56   49    64 0.196  -4.27
 7.05 PlyA + 280951 280956    6                               1.05

 8.00 Prom + 281290 281329   40                              -6.55
 8.01 Init + 295584 295841  258  2  0   77   75   132 0.979   7.98
 8.02 Term + 303097 303216  120  0  0  115   33   132 0.991   7.89
 8.03 PlyA + 303449 303454    6                               1.05

 9.15 PlyA - 308299 308294    6                               1.05
 9.14 Term - 315733 315671   63  1  0   90   44    78 0.517   0.51
 9.13 Intr - 318121 318005  117  1  0   34   75    89 0.740   1.94
 9.12 Intr - 318947 318842  106  1  1   44   99    75 0.992   3.50
 9.11 Intr - 319529 319339  191  2  2   83   97   299 0.722  27.76
 9.10 Intr - 320239 320057  183  1  0    7  113   185 0.932  11.96
 9.09 Intr - 320422 320334   89  2  2   68   39   121 0.085   3.97
 9.08 Intr - 336860 336781   80  1  2   40  116    70 0.043   3.28
 9.07 Intr - 350481 350360  122  0  2   40  105    60 0.117   1.27
 9.06 Intr - 350799 350601  199  2  1   70   43   158 0.184   7.93
 9.05 Intr - 356676 356389  288  2  0   73   94   152 0.144   9.74
 9.04 Intr - 357995 357858  138  1  0   19   94   130 0.087   5.36
 9.03 Intr - 359388 359185  204  2  0   69  110    89 0.291   6.59
 9.02 Intr - 360604 360401  204  0  0   74  110    87 0.592   6.89
 9.01 Intr - 362617 362419  199  2  1  103   94   137 0.966  13.29

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 358053 357858  196  1  1   95   94   108 0.859   9.65
S.002 Intr - 358717 358671   47  0  2   95   24    80 0.839  -0.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:45020656_45383558|GENSCAN_predicted_peptide_1|72_aa
ESKRSESLMDIHHKKLKSKAAEDKNKPQERIPFDRDKDLKVNRFDEAQKKALIKKSRELN
TRFSHGKGNMFL

>gi568815585f:45020656_45383558|GENSCAN_predicted_CDS_1|219_bp
gaatcaaaaagatcagaatctcttatggacatacatcataaaaagttaaagagtaaggct
gctgaagacaaaaataagcctcaagagagaataccatttgaccgtgataaagatctcaag
gttaatcggtttgatgaagctcagaaaaaagccctaataaaaaaatctagagaactaaac
accagattttcacacggcaaaggcaatatgtttttataa

>gi568815585f:45020656_45383558|GENSCAN_predicted_peptide_2|219_aa
MPSQSEVLIPSIGLGLGPIDGWAVYFGQAAQEVPTISALDACKCPEEAFVCGLILIAASQ
VFPPALSVYLLLPEELFGRSQAAAAEPPSRTPHENIGFMSPTGNVYRVWRMMAGAQGVGS
EVEKAGSPRLIHVIIQFLTPQKAFISFITQFLGARNRTDAAGLKEQRNLSEGYWMACRNL
RGPEPGTEALQPGTIAHKKALETLLCWTPQVPPLTTRDQ

>gi568815585f:45020656_45383558|GENSCAN_predicted_CDS_2|660_bp
atgcccagccaatcagaagttttgattccatctataggtttggggttgggcccaatagat
ggttgggccgtctattttgggcaagctgcccaggaggtgcctaccatctctgctctggat
gcttgcaaatgtcccgaagaggctttcgtatgtggtctaatactgatagctgcttctcag
gtttttccgccagcactgtctgtgtacctgcttctgcctgaagagctgtttggaaggtca
caagcagcagcagctgagccaccatcccgaactccacatgagaacatcggcttcatgagc
cccacaggcaacgtgtacagggtctggagaatgatggctggggcacaaggtgtgggttca
gaagtggagaaagcagggtcaccaaggttaatacatgtcattattcagttcctcacacct
caaaaggcttttatttcatttatcactcagtttttaggtgcaaggaacagaaccgacgct
gctggacttaaggagcaaaggaatttatcagaaggatattggatggcttgcaggaacctg
agaggcccagagccaggcactgaggctctgcagccaggaacaattgcccacaagaaagcc
ttagaaacacttctgtgctggaccccacaagttccaccactgacaacacgggatcaataa

>gi568815585f:45020656_45383558|GENSCAN_predicted_peptide_3|530_aa
MASNSLVLITVFHGVSEDCPCIAWPPSPCVSVEETGTLAPAVSAQQSAYGKAGAQDFLDE
GVNCPYLCFVKFTVRTTASHLLNVLSCGSNHVISEYDIILPRSQFKISRKKNSTECQAVA
PQTVDHMEQIQLPEVYSCNLWIQVATLERGNPDSCAGLILKRKLSKARSPSSLESSSHWN
IHSREHMSEQVRDLDGCFGCFQEQAACRPGSSAQVGVPATPEAPEGMLQCSFSSAVCGQC
VLAGKERRLFASQRGLSFVPDARSSALRLLGSLLHPARLHRLQTHGRARGTRLDRRQTEH
RSVASQAARLTKEDDHPDRGGLVFSQGYMYGCTPLLEPPKKLSRRAYGRPGRDLTDKMVF
KQGRKEFMGLPLQIPMGRVFRTEITANASLDGTSPQMFTGLCGLSKVPKYLSQQWAKASG
RGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGGQTLTVF
TESSSDIFGAKPCARIRLASCALRQLVSRPELEVILTAFGDESAVRKLED

>gi568815585f:45020656_45383558|GENSCAN_predicted_CDS_3|1593_bp
atggcgtccaatagcctagtgcttatcacagtttttcacggtgtgtctgaggactgcccg
tgcattgcctggccccccagcccatgtgtgagtgtggaggaaacaggaaccctggctcct
gctgtcagtgcccagcagagtgcttatggcaaagcaggggctcaggattttttggatgaa
ggagtgaattgtccatatctgtgtttcgtaaagttcacagttaggacaactgcttcacac
ttgttaaatgtgttaagttgtggttctaaccatgtgatatcagagtatgacataattctt
cctaggtcccagtttaaaatttccagaaaaaagaattctacagagtgtcaagcagttgcc
ccccaaactgtggatcatatggaacaaattcagctgccagaggtctactcctgtaaccta
tggatccaggtggcaaccctcgaaagagggaatcctgatagctgcgcagggcttatcctg
aaacgcaagctcagcaaggcaagaagcccatcctccttggagagctctagtcactggaac
attcacagcagggagcacatgagtgagcaagtgcgggatctggatggctgctttgggtgc
ttccaggagcaggctgcgtgcaggcctggcagcagtgcccaggttggggtgcctgcaacc
cctgaagctccagagggcatgttacagtgttcttttagctctgccgtctgtggacagtgt
gttctggcaggtaaggaacgccggctcttcgcctctcagcgcggcttgtcctttgttccg
gacgcccgctcctcagccctgcggctcctggggtcgctgctgcatcccgcacgcctccac
cggctgcagacccatggccgagcgcggggaactcgacttgaccggcgccaaacagaacac
aggagtgtggctagtcaagctgcacgcttgaccaaagaggatgaccatccggatagagga
ggactggtcttcagtcaagggtatatgtatggttgtactcccctgctagaacctccaaag
aagctttcaagaagagcttatggcaggccgggaagggacctcactgataagatggtcttt
aagcagggacgtaaagaatttatgggcttgcccttgcagatacccatgggaagagtgttc
cggacagaaataacagcaaatgcgtctttagatgggacgtcaccgcaaatgttcacaggt
ctgtgtggtttgagtaaggttcctaaatatttgtcacagcaatgggctaaagcctctgga
agaggtgaagttgggaaactgcggattgccaagactcaaggaaggactgaggtgtcattt
actttgaatgaggatcttgcaaatattcatgatattggtggaaaaccagcttcagtcagt
gctcctagagaacatccatttgtcttgcaaagtgttggaggacagacattaacagtattt
actgagagctcatcagatatttttggtgctaagccctgtgctagaataagattagcctcc
tgtgcactgaggcaactggtaagtcgaccagaattagaggttattttgacagcttttggt
gatgaatcggctgtgaggaaattggaagattga

>gi568815585f:45020656_45383558|GENSCAN_predicted_peptide_4|171_aa
MDEAGNHHSRQNITRTENQTPHVLTHEETGIPRVKQFACSHTATKQPSKCQALNHYVIMP
SDQILELNAAEVMLHQFQAQSLRDLAAFAFAFLENSHHVKKHGLDLLNDESTKEKPQRTE
QRSLSQHVGIMGAKIQDEIWVGTETNHIKWYPEMCICDSYYRNNKMTKYEK

>gi568815585f:45020656_45383558|GENSCAN_predicted_CDS_4|516_bp
atggatgaagctggaaaccatcattctcggcaaaatatcacaaggacagaaaaccaaaca
ccacatgttctcactcatgaagaaacagggatccccagagttaagcaatttgcctgcagt
cacacagcaaccaagcaaccttcaaagtgccaagctcttaaccactatgtgataatgcct
tcggaccagatcctggaactcaatgcagctgaagtgatgctgcaccagttccaagcccag
tccttaagagacttagcagcttttgcttttgctttcttggaaaacagccaccatgtaaag
aagcatgggctagacctactaaatgacgagagcactaaagagaaaccacaaaggacagag
caaaggtccctctcacaacatgtgggaattatgggagctaaaattcaagatgagatttgg
gtggggacagagacaaaccatatcaagtggtatccagaaatgtgtatatgtgattcctac
tacagaaacaacaaaatgaccaaatacgagaaataa

>gi568815585f:45020656_45383558|GENSCAN_predicted_peptide_5|259_aa
MERKINRREKEKEYEGKHNSLEDTDQGKNCKSTLMTLNVGGYLYITQKQTLTKYPDTFLE
GIVNGKILCPFDADGHYFIDRDGLLFRHVLNFLRNGELLLPEGFRENQLLAQEAEFFQLK
GLAEEVKSRWEKEQLTPRETTFLEITDNHDRSQGLRIFCNAPDFISKIKSRIVLVSKSRL
DGFPEEFSISSNIIQFKYFIKSENGTRLVLKEDNTFVCTLETLKFEAIMMALKCGFRLLT
SLDCSKGSIVHSDALHFIK

>gi568815585f:45020656_45383558|GENSCAN_predicted_CDS_5|780_bp
atggagcgtaaaataaacagaagagaaaaagaaaaggagtatgaagggaaacacaacagc
ctggaagatactgatcaaggaaagaactgcaaatccacactgatgaccctcaacgttggt
ggatatttatacattactcaaaaacaaacactgaccaagtacccagacactttccttgaa
ggtatagtaaatggaaaaatcctctgcccgtttgatgctgatggtcattatttcatagac
agggatggtctcctcttcaggcatgtcctaaacttcctacgaaatggagaacttctattg
cccgaagggtttcgagaaaatcaacttcttgcacaagaagcagaattctttcagctcaag
ggactggcagaggaagtgaaatccaggtgggagaaagaacagctaacacccagagagact
actttcttggaaataacagataaccacgatcgttcacaaggattaagaatcttctgtaat
gctcctgatttcatatcaaaaataaagtctcgcattgttctggtgtccaaaagcaggctg
gatggatttccagaggagttttcaatatcgtcaaatatcatccaatttaaatacttcata
aagtctgaaaatggcactcgacttgtactaaaggaagacaacacctttgtctgtaccttg
gaaactcttaagtttgaggctatcatgatggctttaaagtgtggctttagactgctgacc
agcctggattgttccaaagggtcaattgttcacagcgatgcacttcattttatcaagtaa

>gi568815585f:45020656_45383558|GENSCAN_predicted_peptide_6|163_aa
MTVSNHSHTFPGYKADKLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLD
KVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDIT
KQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYRHYQGEEKSD

>gi568815585f:45020656_45383558|GENSCAN_predicted_CDS_6|492_bp
atgactgtttctaaccacagtcatacatttccagggtataaagctgataagctgtcattg
gaaggaatagtggtacaaagagctgaatgccgaccagctgccagtgaaaactacatgcga
ttaaaaagattgcaaatagaagagtcttccaaaccagtgaggctatcacaacagctggac
aaagttgtaacaaccaattacaaacctgttgctaatcatcaatacaatatcgaatatgaa
aggaaaaagaaagaagacggaaagcgagctcgagctgataaacaacatgttttagacatg
ctattttcagcctttgagaaacatcaatactataatcttaaggacttggtggacatcaca
aagcaacctgtggtgtacctgaaggaaatcttaaaagaaattggtgttcagaatgtaaaa
gggatccacaaaaacacatgggagctgaagccagagtacagacactatcaaggagaagaa
aagagtgactaa

>gi568815585f:45020656_45383558|GENSCAN_predicted_peptide_7|115_aa
MSVTEEGEAISALMIHQMFEKAILSNFPTEGGKLLSSVTGDGETCPGLGKVVESYCHSIV
KITCISHISSYLTGNGHKAINGYEKPGTKEISYVCSDFLALQGVISAGDNSTGSN

>gi568815585f:45020656_45383558|GENSCAN_predicted_CDS_7|348_bp
atgagtgtcaccgaagaaggagaagccatttctgctttgatgattcaccaaatgtttgag
aaagcaattttgagtaactttcctactgaaggagggaagctgttgtcatcagtaactggg
gatggagaaacttgtcctggtttgggtaaagtggttgagagctactgccactcaatagtg
aagataacctgcatttcacacatttctagctacctcacaggaaatggccataaagccatt
aacgggtatgaaaagccggggaccaaggaaatctcatatgtctgctccgatttccttgcc
cttcagggtgtgatttctgcaggcgataacagcactgggagtaactga

>gi568815585f:45020656_45383558|GENSCAN_predicted_peptide_8|125_aa
MDSDRGRGGRGGGGERKRGRRGRRGRKKSGRKEEEEEEEEEALTKEAAFIWIGKHKQALP
GRGWQRGHCRRQNGTGSKGLGAEKWRALNGLDDAHSHWPSTPLSPPPEMLITSGNTLTDT
TRNNS

>gi568815585f:45020656_45383558|GENSCAN_predicted_CDS_8|378_bp
atggattctgacagaggaagaggaggaagagggggaggaggagagaggaagagggggagg
agggggaggagggggaggaagaaaagtgggagaaaggaggaggaggaggaagaggaggag
gaagctctcacaaaggaagcagcatttatctggattggtaaacataagcaggctctgcca
ggtcgaggatggcagaggggtcattgcaggaggcaaaatggcaccggcagcaaggggttg
ggtgcagagaagtggagggccctcaatggattagatgatgcccactcacactggccatct
actccactgagtccaccgccagaaatgctcatcacatctggaaacaccctcacagacaca
accagaaacaatagttaa

>gi568815585f:45020656_45383558|GENSCAN_predicted_peptide_9|727_aa
XPPSRILRSLGPTWRTVGIRSPRRKLQSADGRYLTWELLSDRGPNAAREQKESRSFAIYR
SLRAEGSLGPPSRILRTLGPTWRTVGIRCPRRKLKSADGRYLAWDLLSDRGPNAAREQKE
SRLFTIYRSLRAEGSLGPPSRILRTLGPTWRTVGIRCPRRKLKSADGRYLAWDLLSDRGP
NAAREQKESRLFTIYRSLRAEGRCPRRKLKSANGRYLTWDLLSDGSDAAREQKESRSFAI
YRSLRAEGRAPIAGGGGTPSKAGTESQPLIPHWLRTPMADPRNLKDPPGGLWVLGVQEES
SNLPTAGTLLGIYYPTAVQDRGPNAREQKESRSFAIYRSLRAEGSRLGEFPPMGPKPDHQ
NQQETSSRGSRARPIPMEPESLRVPPRNPCFSKALQIPVLSGNLETIHFTGRPLPDIRRN
RNCSNPLGGVCRGVKPRSSAPFAIQLPTAKWRPHCLPQEAFVNPVRSQPNHRLHDYREVA
IMIIYRDLISRESSLHYPYCRTRGSGVRLWCATEGQIPRAAAGAGNAGNGGARRTVMGGS
VYPADDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTEST
VITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHI
LANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKCMQEEHVLALSVCL
IVAAEIE

>gi568815585f:45020656_45383558|GENSCAN_predicted_CDS_9|2184_bp
ngacccccatcgcggatcctaagatccttaggacccacctggaggactgtgggtattagg
tctccaagaagaaagctccaatctgccgacggcaggtaccttacttgggagttactatcc
gacaggggtccgaacgcagcccgggaacagaaagaaagcaggtcatttgcaatctaccgg
agcctaagggcagaaggcagcttaggacccccatcaaggatcctaagaaccttaggaccc
acttggaggactgtgggtattaggtgtccaagaagaaagctcaaatctgctgacggcagg
taccttgcttgggatttactatccgacaggggtccgaacgcagcccgggaacagaaagaa
agcaggttatttacaatctaccggagcctaagggcagaaggcagcttaggacctccatca
aggatcctaagaaccttaggacccacctggaggactgtgggtattaggtgtccaagaaga
aagctcaaatctgctgacggcaggtaccttgcttgggatttactatccgacaggggtccg
aacgcagcccgggaacagaaagaaagcaggttatttacaatctaccggagcctaagggca
gaaggcaggtgtccaagaagaaagctcaaatctgccaacggcaggtaccttacttgggat
ttactctccgacgggtccgatgccgcccgggaacagaaagaaagcaggtcatttgcaatc
taccggagcctaagggcagaaggcagggcccccatcgcagggggggggggcacccccagc
aaggcggggactgagagccagcccctcatcccccactggcttaggacccccatggcggat
cccaggaaccttaaggacccacctggaggactctgggtattaggtgtccaagaagaaagc
tcaaatctgccgacggcaggtaccttacttgggatttactatccgacagcggtccaagac
aggggtccaaacgcccgggaacagaaagaaagcaggtcatttgcaatctaccggagccta
agggcagaaggcagtcgccttggggagttcccaccaatggggcccaaacctgatcatcaa
aatcaacaggaaacatcttcaagagggtccagggcccgcccaattcccatggaaccagaa
tctttgagagtgccgcccagaaatccgtgtttttcaaaagctctccagatcccagtactc
agcgggaacttggaaaccattcactttaccgggcgccctctgccggacattcggcgaaac
cgtaactgcagcaacccccttggcggggtgtgtaggggcgtcaagccgcgctcatcagcc
ccctttgcaatacagctccctactgctaagtggagaccacactgtcttccccaagaggca
tttgttaaccctgtgcggagccagccaaaccacaggctccatgactaccgggaagtcgcc
atcatgattatctaccgggacctcatcagccgtgagtcctcactgcactatccttactgc
cgcacacgggggtctggggtgcggctctggtgtgctacggaggggcagatcccgcgtgcg
gccgccggcgcgggaaatgcgggaaatggcggcgccaggcgcacggtgatgggcggctct
gtgtatccggcagacgatgagatgttctccgacatctacaagatccgggagatcgcggac
gggttgtgcctggaggtggaggggaagatggtcagtaggacagaaggtaacattgatgac
tcgctcattggtggaaatgcctccgctgaaggccccgagggcgaaggtaccgaaagcaca
gtaatcactggtgtcgatattgtcatgaaccatcacctgcaggaaacaagtttcacaaaa
gaagcctacaagaagtacatcaaagattacatgaaatcaatcaaagggaaacttgaagaa
cagagaccagaaagagtaaaaccttttatgacaggggctgcagaacaaatcaagcacatc
cttgctaatttcaaaaactaccagttctttattggtgaaaacatgaatccagatggcatg
gttgctctattggactaccgtgaggatggtgtgaccccatatatgattttctttaaggat
ggtttagaaatggaaaaatgtatgcaagaagaacatgtccttgcgctttccgtctgtcta
attgtggcagctgagattgaatag