GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:02:29

Sequence gi568815586f:67549134_67758710 : 209577 bp : 40.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   2862   2251  612  0  0   32   85   213 0.323  10.77
 1.00 Prom -   4278   4239   40                              -7.35

 2.06 PlyA -   4374   4369    6                               1.05
 2.05 Term -   5800   5304  497  2  2   -8   42   455 0.437  25.04
 2.04 Intr -   6269   5900  370  2  1   96   19   178 0.327   5.45
 2.03 Intr -   9407   9304  104  0  2   60   92   106 0.111   7.17
 2.02 Intr -  12257  12191   67  2  1  -51   98    96 0.005  -5.74
 2.01 Init -  27970  27863  108  1  0   99   98   117 0.910  14.07
 2.00 Prom -  36525  36486   40                              -3.95

 3.00 Prom +  41620  41659   40                              -8.15
 3.01 Init +  43048  43424  377  0  2   46   87   176 0.521   9.75
 3.02 Intr +  48477  48576  100  0  1   44   37   121 0.297   1.79
 3.03 Term +  58075  58239  165  0  0  101   43   126 0.823   6.33
 3.04 PlyA +  58714  58719    6                               1.05

 4.00 Prom +  61484  61523   40                              -6.85
 4.01 Init +  75476  75770  295  1  1   80    6   279 0.143  16.29
 4.02 Intr +  93347  93427   81  0  0   70   98    33 0.302   1.19
 4.03 Intr +  94084  94241  158  2  2   93    6    83 0.407  -0.59
 4.04 Intr +  94843  94876   34  0  1  102   81    54 0.328   2.98
 4.05 Intr +  98545  98612   68  2  2   83   39    57 0.352  -1.99
 4.06 Intr +  98940  99075  136  2  1   90   45   122 0.360   7.32
 4.07 Intr + 100012 100049   38  2  2   41  107    77 0.506   1.96
 4.08 Intr + 100208 100394  187  1  1   69   16   123 0.560   1.54
 4.09 Intr + 100664 100812  149  0  2   80   93   175 0.955  16.23
 4.10 Term + 107973 109580 1608  2  0   54   49  1702 0.532 151.96
 4.11 PlyA + 111680 111685    6                               1.05

 5.00 Prom + 117835 117874   40                              -6.05
 5.01 Init + 120641 120701   61  1  1   50   89   103 0.104   8.06
 5.02 Intr + 124148 124240   93  0  0   87   46    83 0.023   3.02
 5.03 Term + 132418 132584  167  2  2   77   54   129 0.879   5.50
 5.04 PlyA + 132731 132736    6                               1.05

 6.04 PlyA - 133628 133623    6                               1.05
 6.03 Term - 137468 137355  114  2  0   36   48   121 0.672   0.49
 6.02 Intr - 138070 137901  170  2  2   13   85   112 0.527   2.14
 6.01 Init - 146706 146637   70  0  1   87   78    51 0.569   5.26
 6.00 Prom - 149831 149792   40                              -6.45

 7.05 PlyA - 150067 150062    6                               1.05
 7.04 Term - 150934 150830  105  1  0   87   55    63 0.019   0.33
 7.03 Intr - 165592 165465  128  2  2   60   75   103 0.956   5.68
 7.02 Intr - 166384 166189  196  1  1   64   94   110 0.959   7.27
 7.01 Init - 170215 169892  324  1  0   97   44   234 0.855  17.36
 7.00 Prom - 176763 176724   40                              -3.45

 8.04 PlyA - 177531 177526    6                               1.05
 8.03 Term - 200577 200406  172  2  1   87   45   105 0.728   2.42
 8.02 Intr - 200838 200705  134  0  2  -82   59   203 0.751  -1.08
 8.01 Intr - 204635 204406  230  0  2   76   89   158 0.753  11.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  20134  20223   90  0  0   99   43    84 0.804   1.74
S.002 Init + 130444 130507   64  0  1   89   64    46 0.907   1.66
S.003 Term + 194967 195224  258  2  0   88   47   135 0.821   3.97


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:67549134_67758710|GENSCAN_predicted_peptide_1|204_aa
MNRTNDKNHMIISIDAEKAFSKIQHPFMLKSLNKLGIDGTYLKIIRAIYDKPTANITLNG
QKLEAFLLKTSTRQGHPLSPLLFNIVLEVLARAIRQEKEIKGIQSGKEEVELFLFADDMI
VCLENPIVSAPNLLKLISNFSSLRIQNQCEKSQAFLYTNNRQTESQIMSELLFTIATKRI
KYLAIQLTRDVKDLCKENYKPLLK

>gi568815586f:67549134_67758710|GENSCAN_predicted_CDS_1|612_bp
atgaacagaaccaatgacaaaaaccacatgattatctcaatagatgcagaaaaggccttc
agcaaaattcaacaccccttcatgctaaaatctctcaataaactaggtattgatggaacg
tatctcaaaataataagagctatttatgacaaacccacagccaatatcacactgaatggg
caaaaactggaagcatttcttttgaaaaccagcacaagacaaggacaccctctctcacca
ctcctattcaacatagtattggaagttctggccagggcaatcaggcaagagaaagaaata
aagggtattcaatcaggaaaagaggaagttgaattattcctgtttgcagatgacatgatt
gtatgtttagaaaaccccattgtctcagccccaaatctcctcaagctgattagcaacttc
agcagtctcaggatacaaaatcaatgtgaaaaatcacaagcattcctatacactaacaac
agacaaacagagagccaaatcatgagtgaactccttttcacaattgctacaaaaagaata
aaatacctagcaatacaacttacaagggatgtgaaggacctctgcaaggagaactacaaa
ccactgctcaag

>gi568815586f:67549134_67758710|GENSCAN_predicted_peptide_2|381_aa
MEIDEDTGKSSISGLVGTTAQQEWVQERMESEEVKKCTSVKLVEACKELVITAVAGVRAA
CFGESKGVAFGVNELQRCLLSLPTLRPMPGEDQGISEKKAAAPVRDLQIKPPSPWDRVPG
GRGGCGCSFSRLKRPCLMAKKRADLPAQRSSSAKGQTDSSSGSLAPMYPDWETPPSMGRQ
TPHTGELSLAPGRHPSGMKLPEEGTGSNLCCSAASAERNSININKRDIHSEALSEGHQHQ
RPKVDKSMKMGRNQRKNAENSKNQNASSPPKNHNSSRTREQTWMENEFDELTEVGFRRWV
ITNSSELKEHVITQCKEAKNLEERLEELLTRMTSLEKNINDLMELKNTAQELCEASTSIN
SRIDQAEERISEIEDQLNERK

>gi568815586f:67549134_67758710|GENSCAN_predicted_CDS_2|1146_bp
atggaaatcgatgaagacactggcaaaagcagtatcagtggattggtggggacaacagct
caacaggagtgggttcaagaaagaatggaaagtgaggaagtgaagaagtgcaccagtgtg
aagcttgttgaagcctgcaaagaactggtcatcacagcagtggctggagttagggctgct
tgctttggtgaaagcaaaggtgtagcatttggtgtcaatgagctacagaggtgccttctc
tctctccccacactgaggcccatgccaggtgaagaccagggcatctctgaaaaaaaggca
gcagcaccagtcagggacttacagataaaacccccatctccctgggacagagtacctggg
ggaaggggcggctgtgggtgcagcttcagcagacttaaacgtccctgcctgatggctaag
aagagagcagatctcccagcacagcgctcaagctctgctaagggtcagactgactcctca
agtggttccctggcccccatgtatcctgactgggagacacctcccagtatgggccgacag
acacctcatacaggagagctctcactagcacctggcaggcacccctctgggatgaagctt
ccagaggaaggaactggcagcaatctttgctgttctgcagcctctgctgaaaggaatagc
atcaacatcaacaaaagggacatccactcagaggccctatccgaaggtcaccaacatcaa
agaccaaaggtagataaatccatgaagatggggagaaaccagcgcaaaaatgctgaaaat
tccaaaaaccagaatgcctcttctcctccaaagaatcacaactcctcgcgaacaagggaa
caaacctggatggagaatgagtttgacgaattgacagaagtaggcttcagaagatgggta
ataacaaactcctctgagctaaaggagcatgttataactcaatgcaaggaagccaagaac
cttgaagaaaggttagaggaattgctgactagaatgaccagtttagagaagaacataaat
gacctgatggagctgaaaaacacagcacaagaactttgtgaagcatccacaagtatcaat
agccgaatcgatcaagcagaagaaaggatatcagagattgaagatcaacttaatgaaaga
aagtaa

>gi568815586f:67549134_67758710|GENSCAN_predicted_peptide_3|213_aa
MKEGRKRERERKEGREKRKKEREREKEGKERKKEKERPSKQGGREEERKEKREKEGRRER
KKEERKERKRERKEKEKKKGRKEGRKEGRKEGRKGKREKEGRGKKKRKKRKEGRQQQQQK
QISNEKTQQEGSHLQAMKRALTRNKACRHLDLGLLDSRTPKTEAPGKNSEALEDGRATDG
KMPCRTVCLFATAAITERHKLGGFNNKNPLPQF

>gi568815586f:67549134_67758710|GENSCAN_predicted_CDS_3|642_bp
atgaaagaaggaaggaagagagagagagaaagaaaggaaggaagggagaaaagaaagaaa
gaaagagagagagagaaagaaggaaaagaaagaaagaaagaaaaagaaagaccaagcaag
cagggagggagggaggaagaaaggaaggagaaaagagaaaaggaaggaaggagagagaga
aagaaagaagaaaggaaagaaagaaagagagaaagaaaagaaaaagagaaaaagaaagga
aggaaggaaggaaggaaggaaggaaggaaggaaggacggaaagggaaaagagaaaaggaa
ggaaggggaaaaaagaaaagaaagaaaaggaaggaaggaaggcaacaacaacaacaaaaa
cagatttcaaatgaaaagacacagcaagaaggcagccatctgcaagccatgaagagagcc
ctcaccagaaacaaagcatgccggcaccttgatcttggacttctagactccagaactcca
aagacagaggctccaggaaagaactctgaggctctagaagatggcagagctacagatgga
aagatgccctgcaggactgtgtgtttgtttgctacggctgccataacagagcgccacaaa
ctgggtggcttcaacaacaaaaatccattgcctcagttctaa

>gi568815586f:67549134_67758710|GENSCAN_predicted_peptide_4|917_aa
MEGVAFCPYWYRHFGYGFAFAECNASDKDTICGLTEYLIHYYVISNSIASDQEITLTAKE
VQQWARAHEIPWSYPPSCSSYLDRMVEWSFEDSSGIKLGLLPRDSHKLLTSFKSAEISPY
QKGLHSARSSMIPRTQESACSLLAAPRAAPWAYLLEADSTGTYFISCVNCVATSLRRLVV
LDLGDGDIEVEVAKPVTFEQRRTVCHARRGADRLASGHLVSVNRGGCVVEVGGQPPLSPL
LRVNELSGRPSRDLPLRGNLRPPLPPPTRPGCARPRRPLRGEPSARRGFCLPGARAGTVQ
ACRPALRCPGLGVAVAPCSAVQTHLPAAGRLQRRGGDSAVRQLQASPGLGAGATRSGVGT
GPPSPIALPPLRASNAAAAAHTIGGSKHTMNDHLHVGSHAHGQIQVQQLFEDNSNKRTVL
TTQPNGLTTVGKTGLPVVPERQLDSIHRRQGSSTSLKSMEGMGKVKATPMTPEQAMKQYM
QKLTAFEHHEIFSYPEIYFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDHVAYRYEV
LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV
IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI
IHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPID
MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRY
CTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM
TPGQALRHPWLRRRLPKPPTGEKTSVKRITESTGAITSISKLPPPSSSASKLRTNLAQMT
DANGNIQQRTVLPKLVS

>gi568815586f:67549134_67758710|GENSCAN_predicted_CDS_4|2754_bp
atggaaggtgtagcattttgtccttactggtatagacactttggatatggatttgccttt
gctgagtgtaatgcttctgacaaagataccatctgtggacttacagaataccttatccac
tactatgttatttcaaacagcattgcttctgatcaagaaattaccctcacagcaaaagaa
gtgcagcaatgggcccgtgctcatgaaattccctggtcttacccaccatcctgcagcagc
tatcttgatagaatggtagaatggtctttcgaagattcatctggcatcaagctaggcctt
ctgcccagagattcccataagcttctcacttctttcaaatctgctgagatatcaccttat
cagaaaggccttcacagtgcaaggtccagcatgatccccaggacccaggaatcagcctgt
tctttgctggctgctccccgtgcagccccatgggcttatctcctagaggctgactccact
ggcacctactttataagctgtgtcaattgcgtggccactagcctgagaagactggtagtt
ctggaccttggtgatggagacatagaagttgaagtggcaaaacctgtgacctttgaacag
aggcgcactgtgtgccacgcacgacgaggcgcggatcgactggcgagcggtcacttggtg
tcagtaaaccggggagggtgtgtggtggaggtgggagggcagccccctctttcgcccctg
ctcagggtcaacgagctcagcggccgcccctcccgggacttgcctctccgaggaaacctt
cggccgccgctcccgccgcctacccgaccgggttgtgcgcggccccgaaggcccctccgc
ggggagccctcggcccgaagaggcttctgcctgccgggggcccgggcggggaccgtccag
gcctgccgccccgccctgcgctgcccggggcttggcgtggccgtggctccctgctcagct
gtccaaacccacctcccggctgctggccgtctgcaacgccgaggtggggacagcgccgtt
cgtcagcttcaggcttccccggggctcggtgcaggggccacccggagcggagtggggact
ggcccgccctcccccatcgccctgccgcctctccgggccagcaacgctgccgccgcagcc
cacacgattggcggcagtaagcacacaatgaatgatcacctgcatgtcggcagccacgct
cacggacagatccaggttcaacagttgtttgaggataacagtaacaagcggacagtgctc
acgacacaaccaaatgggcttacaacagtgggcaaaacgggcttgccagtggtgccagag
cggcagctggacagcattcatagacggcaggggagctccacctctctaaagtccatggaa
ggcatggggaaggtgaaagccacccccatgacacctgaacaagcaatgaagcaatacatg
caaaaactcacagccttcgaacaccatgagattttcagctaccctgaaatatatttcttg
ggtctaaatgctaagaagcgccagggcatgacaggtgggcccaacaatggtggctatgat
gatgaccagggatcatatgtgcaggtgccccacgatcacgtggcttacaggtatgaggtc
ctcaaggtcattgggaaggggagctttgggcaggtggtcaaggcctacgatcacaaagtc
caccagcacgtggccctaaagatggtgcggaatgagaagcgcttccaccggcaagcagcg
gaggagatccgaatcctggaacacctgcggaagcaggacaaggataacacaatgaatgtc
atccatatgctggagaatttcaccttccgcaaccacatctgcatgacgtttgagctgctg
agcatgaacctctatgagctcatcaagaagaataaattccagggcttcagtctgcctttg
gttcgcaagtttgcccactcgattctgcagtgcttggatgctttgcacaaaaacagaata
attcactgtgaccttaagcccgagaacattttgttaaagcagcagggtagaagcggtatt
aaagtaattgattttggctccagttgttacgagcatcagcgtgtctacacgtacatccag
tcgcgtttttaccgggctccagaagtgatccttggggccaggtatggcatgcccattgat
atgtggagcctgggctgcattttagcagagctcctgacgggttaccccctcttgcctggg
gaagatgaaggggaccagctggcctgtatgattgaactgttgggcatgccctcacagaaa
ctgctggatgcatccaaacgagccaaaaattttgtgagctccaagggttatccccgttac
tgcactgtcacgactctctcagatggctctgtggtcctaaacggaggccgttcccggagg
gggaaactgaggggcccaccggagagcagagagtgggggaacgcgctgaaggggtgtgat
gatccccttttccttgacttcttaaaacagtgtttagagtgggatcctgcagtgcgcatg
accccaggccaggctttgcggcacccctggctgaggaggcggttgccaaagcctcccacc
ggggagaaaacgtcagtgaaaaggataactgagagcaccggtgctatcacatctatatcc
aagttacctccaccttctagctcagcttccaaactgaggactaatttggcgcagatgaca
gatgccaatgggaatattcagcagaggacagtgttgccaaaacttgttagctga

>gi568815586f:67549134_67758710|GENSCAN_predicted_peptide_5|106_aa
MNVGRECGEMERKMMSKGGASTQCKLSVDLPFWGLEDSDPLLTAPLGSATVGLKQRLPVT
ATCVDKRELDKAELSALNEVTYLSCRYESIAKDYENLKKNEDKRAG

>gi568815586f:67549134_67758710|GENSCAN_predicted_CDS_5|321_bp
atgaacgtcggccgtgaatgtggggagatggagagaaagatgatgagcaaaggtggagca
agtacacagtgcaagctgtcagtggatctaccattctggggtctggaggacagtgaccct
cttctcacagctccactaggcagtgccacagtaggtctaaagcaaaggctgccagtgaca
gccacttgtgtagacaagagagagctggacaaggccgagctatctgcattgaatgaggtg
acttacctcagttgtaggtatgaatctatagccaaggattatgaaaacctgaagaaaaat
gaggacaaaagagcaggttga

>gi568815586f:67549134_67758710|GENSCAN_predicted_peptide_6|117_aa
MEALNTVAKEALTKETFEQRLEREKDNVNNPISAKEIGFVDRNLPTKKTPDSGSVENYIK
HFEKEIISILYKLFQKFEDKIRNKTRMLALKLLFSTVSEIVASAVIEEKEIKSIQIG

>gi568815586f:67549134_67758710|GENSCAN_predicted_CDS_6|354_bp
atggaagccttaaatacagtagccaaggaagccctcactaaggagacatttgagcaaaga
cttgaaagagaaaaagataatgtgaacaacccaatatctgcgaaagaaattggatttgta
gatagaaaccttcctacaaagaaaactccagactcaggttcagtggagaattatatcaaa
cattttgagaaggaaataatatcaattctgtataaactcttccaaaaatttgaagacaag
atcaggaacaagacaaggatgcttgctctcaaacttctattcagtactgtatcggagatt
gtggccagtgcagtcatagaagaaaaagaaataaagagcatccagattggataa

>gi568815586f:67549134_67758710|GENSCAN_predicted_peptide_7|250_aa
MPEPPTPSVGSCAAQASPMSNAPCSTAPSTINHPRAEECGRTARDWQAAPPAAPVRDPLG
EASWAPESGGDVENLYVQLRDCKYTNQHPVSSSGFVNAPMDTLYLATLRSTSVGPERTLC
IPGLQPLDSSNSRKRQPLIPDLEFTKGQCLQEFSSDLMIDALPIMSPRKSPMPRAEGLIG
KREGRKQKEEAPQYRDRGWGAPKPRKEVASVVDTSQWSYIYPFYQISFDIARQLFQVDQL
ADRRAESKMQ

>gi568815586f:67549134_67758710|GENSCAN_predicted_CDS_7|753_bp
atgcctgagcctcccaccccctccgtgggctcctgtgcggcccaagcctccccgatgagc
aacgccccctgctccacggcgcccagtaccatcaaccacccaagggctgaggagtgcggg
cgcacggcgcgggactggcaggcagctccacctgcagcccctgtgcgggatccactgggt
gaagccagctgggctcctgagtctggtggggacgtggagaacctttatgtccagctcagg
gattgtaaatacaccaatcagcaccctgtgtctagctcagggtttgtgaatgcaccaatg
gacactctgtatctagctactctgagaagcacttcagtgggaccagagagaacactgtgc
atcccaggattgcagccactggactccagcaactcgaggaagaggcagccattgatacca
gacctagaattcactaaaggtcaatgccttcaggaattttcatctgatttgatgattgat
gccctccccatcatgagccccaggaagtctcccatgccacgagcagagggtttaataggc
aagagggaagggagaaaacagaaggaagaagctccccagtacagagacagagggtggggg
gctccaaagccacgaaaggaggtggcaagtgtggtggacaccagccagtggagctatatt
tacccgttttatcagatatcttttgatattgcaaggcagttgtttcaggtagaccagctt
gcagacaggagagctgagagcaaaatgcagtga

>gi568815586f:67549134_67758710|GENSCAN_predicted_peptide_8|178_aa
XPSKGAIGKAQTESAFKSSLASHLLLLRASCGKREPLACGRGISYFSKPLGEHFSKAKGN
LPMKLLVTKPALSKTVVAVSELENEGSQQCAQSKSEDLRTKEDNGVNLSSRRKVQEPKGP
LVPSANWRVPTHIEGGYSPLSPLTYMPVSSANVLTPRAAQSFNQTPSHLALRNKFSAY

>gi568815586f:67549134_67758710|GENSCAN_predicted_CDS_8|537_bp
ntaccttcaaagggagcgataggtaaagcacaaacagaatcagctttcaaaagttccctg
gcttcccacctgctgctgctgcgggcttcctgtgggaaaagggaaccgctggcctgtggg
agaggaatcagctatttctcaaagccactgggagagcacttttcaaaggcaaaaggaaat
cttcccatgaagctgttagttaccaagcccgcactgagcaagacagtggtggctgtcagc
gagctggagaatgaaggaagccagcagtgtgctcagtccaagtctgaagaccttagaacc
aaggaagacaatggtgtaaatctcagttcaaggcgaaaggtccaagagcccaagggtcca
ctggtgccctcagccaactggagagtgcctactcacattgaaggtggatattctccactc
agcccactgacttacatgccagtctcctctgcaaacgtcctcacacctcgggcagcccaa
tcatttaaccaaactccaagtcacctggctttgaggaacaagttcagtgcctactga